RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 OLFM1Q99784 485 aa12.46□□□□□ -0.42
HDAC4-208ENST00000463007 ADI1Q9BV57 179 aa12.46□□□□□ -0.42
HDAC4-208ENST00000463007 FAM105AQ9NUU6 356 aa12.46□□□□□ -0.42
HDAC4-208ENST00000463007 DUS2Q9NX74 493 aaKnown RBP12.46□□□□□ -0.42
HDAC4-208ENST00000463007 VTI1BQ9UEU0 232 aa12.46□□□□□ -0.42
HDAC4-208ENST00000463007 KCNC1P48547 511 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 CLCN2P51788 898 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 PHEXP78562 749 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 ELMSAN1Q6PJG2 1045 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 AGMOQ6ZNB7 445 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 PDZD4Q76G19 769 aaPredicted RBP12.45□□□□□ -0.42
HDAC4-208ENST00000463007 CARM1Q86X55 608 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 SGCDQ92629 289 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 ISL2Q96A47 359 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 TUBGCP3Q96CW5 907 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 SLC2A11Q9BYW1 496 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 PCDH12Q9NPG4 1184 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 TRNAU1APQ9NX07 287 aaKnown RBP12.45□□□□□ -0.42
HDAC4-208ENST00000463007 MPP6Q9NZW5 540 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 FBXO5Q9UKT4 447 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 TRAF6Q9Y4K3 522 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 TIMM22Q9Y584 194 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 MYLKQ15746 1914 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 PLXNA3P51805 1871 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 A0A0J9YYE9 177 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 DHRS12A0PJE2 317 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 MYBPHLA2RUH7 354 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 A8MT66 165 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 ZBBXA8MT70 800 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 TOR1BO14657 336 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 ANGPT2O15123 496 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 SNAP29O95721 258 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 OCM2P0CE71 109 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 OCMP0CE72 109 aaPredicted RBP12.45□□□□□ -0.42
HDAC4-208ENST00000463007 HSPA8P11142 646 aaKnown RBP12.45□□□□□ -0.42
HDAC4-208ENST00000463007 CPB1P15086 417 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 MAGEA12P43365 314 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 CLCNKBP51801 687 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 C21orf59P57076 290 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 NAB1Q13506 487 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 LRP8Q14114 963 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 FRG1Q14331 258 aaKnown RBP12.45□□□□□ -0.42
HDAC4-208ENST00000463007 UPP1Q16831 310 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 PERM1Q5SV97 790 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 NAPEPLDQ6IQ20 393 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 SCML4Q8N228 414 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 SMYD1Q8NB12 490 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 NSUN5Q96P11 429 aaKnown RBP12.45□□□□□ -0.42
HDAC4-208ENST00000463007 GBA3Q9H227 469 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 CNGB3Q9NQW8 809 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 NDFIP2Q9NV92 336 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 FBXW11Q9UKB1 542 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 ST3GAL5Q9UNP4 418 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 RAD54BQ9Y620 910 aa12.45□□□□□ -0.42
HDAC4-208ENST00000463007 MSI1O43347 362 aaKnown RBP12.44□□□□□ -0.42
HDAC4-208ENST00000463007 PARNO95453 639 aaKnown RBP12.44□□□□□ -0.42
HDAC4-208ENST00000463007 IGLV3-25P01717 112 aa12.44□□□□□ -0.42
HDAC4-208ENST00000463007 COL6A2P12110 1019 aa12.44□□□□□ -0.42
HDAC4-208ENST00000463007 IMPDH2P12268 514 aa12.44□□□□□ -0.42
HDAC4-208ENST00000463007 ELK4P28324 431 aa12.44□□□□□ -0.42
HDAC4-208ENST00000463007 CSRP3P50461 194 aa12.44□□□□□ -0.42
HDAC4-208ENST00000463007 KPNA1P52294 538 aaPredicted RBP12.44□□□□□ -0.42
HDAC4-208ENST00000463007 FOXA1P55317 472 aa12.44□□□□□ -0.42
HDAC4-208ENST00000463007 BFSP2Q13515 415 aa12.44□□□□□ -0.42
HDAC4-208ENST00000463007 GRB7Q14451 532 aa12.44□□□□□ -0.42
HDAC4-208ENST00000463007 CARTPTQ16568 116 aa12.44□□□□□ -0.42
HDAC4-208ENST00000463007 C6orf10Q5SRN2 563 aa12.44□□□□□ -0.42
HDAC4-208ENST00000463007 TWF2Q6IBS0 349 aaKnown RBP12.44□□□□□ -0.42
HDAC4-208ENST00000463007 GDF6Q6KF10 455 aaPredicted RBP12.44□□□□□ -0.42
HDAC4-208ENST00000463007 TMEM214Q6NUQ4 689 aaKnown RBP12.44□□□□□ -0.42
HDAC4-208ENST00000463007 KCTD8Q6ZWB6 473 aa12.44□□□□□ -0.42
HDAC4-208ENST00000463007 SERINC5Q86VE9 423 aa12.44□□□□□ -0.42
HDAC4-208ENST00000463007 ZC3H7AQ8IWR0 971 aaKnown RBP12.44□□□□□ -0.42
HDAC4-208ENST00000463007 ZNF419Q96HQ0 510 aaPredicted RBP12.44□□□□□ -0.42
HDAC4-208ENST00000463007 C1orf50Q9BV19 199 aa12.44□□□□□ -0.42
HDAC4-208ENST00000463007 DGCR6LQ9BY27 220 aa12.44□□□□□ -0.42
HDAC4-208ENST00000463007 TBC1D23Q9NUY8 699 aa12.44□□□□□ -0.42
HDAC4-208ENST00000463007 TRPV2Q9Y5S1 764 aa12.44□□□□□ -0.42
HDAC4-208ENST00000463007 THSD7BQ9C0I4 1608 aa12.44□□□□□ -0.42
HDAC4-208ENST00000463007 ARL5CA6NH57 179 aa12.44□□□□□ -0.42
HDAC4-208ENST00000463007 NME4O00746 187 aa12.44□□□□□ -0.42
HDAC4-208ENST00000463007 UBFD1O14562 309 aaKnown RBP12.44□□□□□ -0.42
HDAC4-208ENST00000463007 KPNA6O60684 536 aa12.44□□□□□ -0.42
HDAC4-208ENST00000463007 DUSP11O75319 330 aaKnown RBP12.44□□□□□ -0.42
HDAC4-208ENST00000463007 CRCPO75575 148 aa12.44□□□□□ -0.42
HDAC4-208ENST00000463007 APOA4P06727 396 aa12.44□□□□□ -0.42
HDAC4-208ENST00000463007 CYBAP13498 195 aa12.44□□□□□ -0.42
HDAC4-208ENST00000463007 VARSP26640 1264 aaKnown RBP12.44□□□□□ -0.42
HDAC4-208ENST00000463007 SLC7A1P30825 629 aa12.44□□□□□ -0.42
HDAC4-208ENST00000463007 TPD52P55327 224 aaPredicted RBP12.44□□□□□ -0.42
HDAC4-208ENST00000463007 LSM3P62310 102 aaKnown RBP12.44□□□□□ -0.42
HDAC4-208ENST00000463007 PM20D1Q6GTS8 502 aa12.44□□□□□ -0.42
HDAC4-208ENST00000463007 FAM171BQ6P995 826 aa12.44□□□□□ -0.42
HDAC4-208ENST00000463007 TFAP2DQ7Z6R9 452 aa12.44□□□□□ -0.42
HDAC4-208ENST00000463007 RANBP9Q96S59 729 aa12.44□□□□□ -0.42
HDAC4-208ENST00000463007 PAAF1Q9BRP4 392 aa12.44□□□□□ -0.42
HDAC4-208ENST00000463007 PLGRKTQ9HBL7 147 aa12.44□□□□□ -0.42
HDAC4-208ENST00000463007 ZFYVE28Q9HCC9 887 aa12.44□□□□□ -0.42
HDAC4-208ENST00000463007 MID1IP1Q9NPA3 183 aa12.44□□□□□ -0.42
HDAC4-208ENST00000463007 SLC38A7Q9NVC3 462 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms