RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 RHOT1Q8IXI2 618 aa13.74□□□□□ -0.21
SCAMP4-206ENST00000460767 PGBD5Q8N414 524 aa13.74□□□□□ -0.21
SCAMP4-206ENST00000460767 SPC24Q8NBT2 197 aa13.74□□□□□ -0.21
SCAMP4-206ENST00000460767 KCTD6Q8NC69 237 aa13.74□□□□□ -0.21
SCAMP4-206ENST00000460767 DENND6BQ8NEG7 585 aa13.74□□□□□ -0.21
SCAMP4-206ENST00000460767 OR6K2Q8NGY2 324 aa13.74□□□□□ -0.21
SCAMP4-206ENST00000460767 ASB12Q8WXK4 309 aa13.74□□□□□ -0.21
SCAMP4-206ENST00000460767 GLMNQ92990 594 aa13.74□□□□□ -0.21
SCAMP4-206ENST00000460767 PPP1R16AQ96I34 528 aa13.74□□□□□ -0.21
SCAMP4-206ENST00000460767 LENG8Q96PV6 779 aaPredicted RBP13.74□□□□□ -0.21
SCAMP4-206ENST00000460767 MGME1Q9BQP7 344 aa13.74□□□□□ -0.21
SCAMP4-206ENST00000460767 CAAP1Q9H8G2 361 aa13.74□□□□□ -0.21
SCAMP4-206ENST00000460767 LUC7LQ9NQ29 371 aaKnown RBP13.74□□□□□ -0.21
SCAMP4-206ENST00000460767 DYRK4Q9NR20 520 aa13.74□□□□□ -0.21
SCAMP4-206ENST00000460767 DTLQ9NZJ0 730 aa13.74□□□□□ -0.21
SCAMP4-206ENST00000460767 HYOU1Q9Y4L1 999 aa13.74□□□□□ -0.21
SCAMP4-206ENST00000460767 FADS3Q9Y5Q0 445 aa13.74□□□□□ -0.21
SCAMP4-206ENST00000460767 CPED1A4D0V7 1026 aa13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 C16orf96A6NNT2 1141 aa13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 TMEM110-MUSTN1A8MSY1 372 aa13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 DFFAO00273 331 aa13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 KPNA3O00505 521 aaPredicted RBP13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 TRAFD1O14545 582 aaPredicted RBP13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 NVLO15381 856 aaKnown RBP13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 BNIP3LO60238 219 aa13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 PPFIA2O75334 1257 aa13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 NEK3P51956 506 aa13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 PFN3P60673 137 aa13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 RHOAP61586 193 aa13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 RPS21P63220 83 aaKnown RBP13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 SPIDRQ14159 915 aa13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 FGL2Q14314 439 aa13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 IHHQ14623 411 aa13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 TMCO4Q5TGY1 634 aa13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 SEL1L3Q68CR1 1132 aa13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 MFSD7Q6UXD7 560 aa13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 ZSWIM9Q86XI8 627 aa13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 KATNAL2Q8IYT4 538 aa13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 KLK6Q92876 244 aa13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 EXTL1Q92935 676 aa13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 RAB7BQ96AH8 199 aa13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 HDAC11Q96DB2 347 aa13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 TUBGCP5Q96RT8 1024 aa13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 KLF6Q99612 283 aaPredicted RBP13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 IL12RB2Q99665 862 aa13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 ARHGAP9Q9BRR9 750 aa13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 SLC17A9Q9BYT1 436 aa13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 ZDHHC6Q9H6R6 413 aa13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 DDX56Q9NY93 547 aaKnown RBP13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 SPASTQ9UBP0 616 aa13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 KLF15Q9UIH9 416 aa13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 RP1P56715 2156 aa13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 BSNQ9UPA5 3926 aa13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 DOPEY2Q9Y3R5 2298 aa13.73□□□□□ -0.21
SCAMP4-206ENST00000460767 PIEZO2Q9H5I5 2752 aa13.72□□□□□ -0.21
SCAMP4-206ENST00000460767 GRID2IPA4D2P6 1211 aa13.72□□□□□ -0.21
SCAMP4-206ENST00000460767 POM121BA6NF01 834 aa13.72□□□□□ -0.21
SCAMP4-206ENST00000460767 HTRA2O43464 458 aaPredicted RBP13.72□□□□□ -0.21
SCAMP4-206ENST00000460767 PALMO75781 387 aa13.72□□□□□ -0.21
SCAMP4-206ENST00000460767 UGT2B4P06133 528 aa13.72□□□□□ -0.21
SCAMP4-206ENST00000460767 SLC5A2P31639 672 aa13.72□□□□□ -0.21
SCAMP4-206ENST00000460767 CCKBRP32239 447 aa13.72□□□□□ -0.21
SCAMP4-206ENST00000460767 CTNNA1P35221 906 aaKnown RBP13.72□□□□□ -0.21
SCAMP4-206ENST00000460767 HSPA9P38646 679 aaKnown RBP13.72□□□□□ -0.21
SCAMP4-206ENST00000460767 PEX5P50542 639 aa13.72□□□□□ -0.21
SCAMP4-206ENST00000460767 ADCY2Q08462 1091 aa13.72□□□□□ -0.21
SCAMP4-206ENST00000460767 LBRQ14739 615 aaKnown RBP13.72□□□□□ -0.21
SCAMP4-206ENST00000460767 GRM3Q14832 879 aa13.72□□□□□ -0.21
SCAMP4-206ENST00000460767 DEFB133Q30KQ1 61 aa13.72□□□□□ -0.21
SCAMP4-206ENST00000460767 ZNF542PQ5EBM4 170 aa13.72□□□□□ -0.21
SCAMP4-206ENST00000460767 GDPD4Q6W3E5 623 aa13.72□□□□□ -0.21
SCAMP4-206ENST00000460767 ZNF662Q6ZS27 426 aa13.72□□□□□ -0.21
SCAMP4-206ENST00000460767 SLC35F3Q8IY50 421 aa13.72□□□□□ -0.21
SCAMP4-206ENST00000460767 KRT35Q92764 455 aa13.72□□□□□ -0.21
SCAMP4-206ENST00000460767 EXOC2Q96KP1 924 aa13.72□□□□□ -0.21
SCAMP4-206ENST00000460767 ZNF641Q96N77 438 aaPredicted RBP13.72□□□□□ -0.21
SCAMP4-206ENST00000460767 KLHL32Q96NJ5 620 aa13.72□□□□□ -0.21
SCAMP4-206ENST00000460767 CCDC3Q9BQI4 270 aa13.72□□□□□ -0.21
SCAMP4-206ENST00000460767 B3GNT4Q9C0J1 378 aa13.72□□□□□ -0.21
SCAMP4-206ENST00000460767 SLC25A18Q9H1K4 315 aa13.72□□□□□ -0.21
SCAMP4-206ENST00000460767 ADNPQ9H2P0 1102 aa13.72□□□□□ -0.21
SCAMP4-206ENST00000460767 SP110Q9HB58 689 aa13.72□□□□□ -0.21
SCAMP4-206ENST00000460767 GEMIN8Q9NWZ8 242 aaKnown RBP13.72□□□□□ -0.21
SCAMP4-206ENST00000460767 SEPT3Q9UH03 358 aa13.72□□□□□ -0.21
SCAMP4-206ENST00000460767 ADGRG1Q9Y653 693 aa13.72□□□□□ -0.21
SCAMP4-206ENST00000460767 LRRD1A4D1F6 860 aa13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 LMO7DNF2Z398 122 aa13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 KRIT1O00522 736 aa13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 TOR1BO14657 336 aa13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 MATN3O15232 486 aa13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 PCDH8O95206 1070 aa13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 TIMP2P16035 220 aa13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 JUNDP17535 347 aa13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 CCNCP24863 283 aa13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 PTPN7P35236 360 aa13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 UGT1A5P35504 534 aa13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 GJC1P36383 396 aa13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 SSR1P43307 286 aaKnown RBP13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 DNA2P51530 1060 aa13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 SUOXP51687 545 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms