RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 FAM156AQ8NDB6 213 aa15.45■□□□□ 0.06
LMNB1-203ENST00000460265 SKA2Q8WVK7 121 aaPredicted RBP15.45■□□□□ 0.06
LMNB1-203ENST00000460265 RCN3Q96D15 328 aa15.45■□□□□ 0.06
LMNB1-203ENST00000460265 SERPINI1Q99574 410 aa15.45■□□□□ 0.06
LMNB1-203ENST00000460265 RBMX2Q9Y388 322 aaKnown RBP15.45■□□□□ 0.06
LMNB1-203ENST00000460265 SBF1O95248 1867 aa15.45■□□□□ 0.06
LMNB1-203ENST00000460265 PLXNA1Q9UIW2 1896 aa15.45■□□□□ 0.06
LMNB1-203ENST00000460265 C9JVG2 144 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 DLX3O60479 287 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 SNNO75324 88 aaPredicted RBP15.44■□□□□ 0.06
LMNB1-203ENST00000460265 RHOBTB1O94844 696 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 FAM58BPP0C7Q3 252 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 FMO4P31512 558 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 RPL34P49207 117 aaKnown RBP15.44■□□□□ 0.06
LMNB1-203ENST00000460265 ZNF135P52742 658 aaPredicted RBP15.44■□□□□ 0.06
LMNB1-203ENST00000460265 STX1BP61266 288 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 AGKQ53H12 422 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 C16orf87Q6PH81 154 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 LPCAT1Q8NF37 534 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 LRGUKQ96M69 825 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 SMOC2Q9H3U7 446 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 ATP13A1Q9HD20 1204 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 TRNAU1APQ9NX07 287 aaKnown RBP15.44■□□□□ 0.06
LMNB1-203ENST00000460265 ARL5AQ9Y689 179 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 THRAP10827 490 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 CHRM3P20309 590 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 CLCN2P51788 898 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 SEMA3BQ13214 749 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 MS4A13Q5J8X5 152 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 CLLU1OSQ5K130 101 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 CLEC6AQ6EIG7 209 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 TMEM214Q6NUQ4 689 aaKnown RBP15.44■□□□□ 0.06
LMNB1-203ENST00000460265 PIM3Q86V86 326 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 ERI1Q8IV48 349 aaKnown RBP15.44■□□□□ 0.06
LMNB1-203ENST00000460265 ARHGAP12Q8IWW6 846 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 OR13C4Q8NGS5 318 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 OR6K2Q8NGY2 324 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 HMX1Q9NP08 348 aaPredicted RBP15.44■□□□□ 0.06
LMNB1-203ENST00000460265 VWA7Q9Y334 891 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 RAP2CQ9Y3L5 183 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 AP4B1Q9Y6B7 739 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 PLXNB2O15031 1838 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 SUPT3HB4E1H0 165 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 FOXD2O60548 495 aaPredicted RBP15.44■□□□□ 0.06
LMNB1-203ENST00000460265 CABYRO75952 493 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 SLC10A3P09131 477 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 CDH2P19022 906 aaPredicted RBP15.44■□□□□ 0.06
LMNB1-203ENST00000460265 FLOT2Q14254 428 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 TBCCQ15814 346 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 PFKFB4Q16877 469 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 ANKDD1AQ495B1 522 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 RNF111Q6ZNA4 994 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 DCBLD1Q8N8Z6 715 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 DDHD1Q8NEL9 900 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 DCUN1D1Q96GG9 259 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 MRGPRX2Q96LB1 330 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 NPAS2Q99743 824 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 HEPHQ9BQS7 1158 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 CSNK1G1Q9HCP0 422 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 CROTQ9UKG9 612 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 PCDHGC4Q9Y5F7 938 aa15.44■□□□□ 0.06
LMNB1-203ENST00000460265 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.43■□□□□ 0.06
LMNB1-203ENST00000460265 A0A0D9SEW6 157 aa15.43■□□□□ 0.06
LMNB1-203ENST00000460265 A0A0U1RQS6 177 aa15.43■□□□□ 0.06
LMNB1-203ENST00000460265 E5RI56 91 aa15.43■□□□□ 0.06
LMNB1-203ENST00000460265 ITGB6P18564 788 aa15.43■□□□□ 0.06
LMNB1-203ENST00000460265 PLIN5Q00G26 463 aa15.43■□□□□ 0.06
LMNB1-203ENST00000460265 ZNF177Q13360 481 aaPredicted RBP15.43■□□□□ 0.06
LMNB1-203ENST00000460265 RTN4RL1Q86UN2 441 aaPredicted RBP15.43■□□□□ 0.06
LMNB1-203ENST00000460265 CARNMT1Q8N4J0 409 aa15.43■□□□□ 0.06
LMNB1-203ENST00000460265 BTN2A3PQ96KV6 586 aa15.43■□□□□ 0.06
LMNB1-203ENST00000460265 SORT1Q99523 831 aa15.43■□□□□ 0.06
LMNB1-203ENST00000460265 OSBPL6Q9BZF3 934 aa15.43■□□□□ 0.06
LMNB1-203ENST00000460265 POLR1EQ9GZS1 481 aaKnown RBP15.43■□□□□ 0.06
LMNB1-203ENST00000460265 PLK2Q9NYY3 685 aa15.43■□□□□ 0.06
LMNB1-203ENST00000460265 FAM8A1Q9UBU6 413 aa15.43■□□□□ 0.06
LMNB1-203ENST00000460265 PCDHGB4Q9UN71 923 aa15.43■□□□□ 0.06
LMNB1-203ENST00000460265 PCDHGB5Q9Y5G0 923 aa15.43■□□□□ 0.06
LMNB1-203ENST00000460265 GPC6Q9Y625 555 aaPredicted RBP15.43■□□□□ 0.06
LMNB1-203ENST00000460265 SF3B1O75533 1304 aaKnown RBP eCLIP15.43■□□□□ 0.063e-6■■■■■ 73.4
LMNB1-203ENST00000460265 ADAMTS4O75173 837 aa15.43■□□□□ 0.06
LMNB1-203ENST00000460265 OXSR1O95747 527 aaPredicted RBP15.43■□□□□ 0.06
LMNB1-203ENST00000460265 GABRB3P28472 473 aa15.43■□□□□ 0.06
LMNB1-203ENST00000460265 ARRB2P32121 409 aa15.43■□□□□ 0.06
LMNB1-203ENST00000460265 SLC11A2P49281 568 aa15.43■□□□□ 0.06
LMNB1-203ENST00000460265 MRPS22P82650 360 aaKnown RBP15.43■□□□□ 0.06
LMNB1-203ENST00000460265 HSF5Q4G112 596 aaPredicted RBP15.43■□□□□ 0.06
LMNB1-203ENST00000460265 ZNF362Q5T0B9 420 aaPredicted RBP15.43■□□□□ 0.06
LMNB1-203ENST00000460265 SCIMPQ6UWF3 145 aa15.43■□□□□ 0.06
LMNB1-203ENST00000460265 MRPL10Q7Z7H8 261 aaKnown RBP15.43■□□□□ 0.06
LMNB1-203ENST00000460265 CCDC117Q8IWD4 279 aaPredicted RBP15.43■□□□□ 0.06
LMNB1-203ENST00000460265 KYQ8NBH2 561 aa15.43■□□□□ 0.06
LMNB1-203ENST00000460265 ESAMQ96AP7 390 aa15.43■□□□□ 0.06
LMNB1-203ENST00000460265 TSPAN17Q96FV3 270 aa15.43■□□□□ 0.06
LMNB1-203ENST00000460265 SLC25A51Q9H1U9 297 aa15.43■□□□□ 0.06
LMNB1-203ENST00000460265 OXSMQ9NWU1 459 aa15.43■□□□□ 0.06
LMNB1-203ENST00000460265 A0A088AWK7 358 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 FUOMA2VDF0 154 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 TMEM88BA6NKF7 163 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 H0Y626 953 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms