RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 JCHAINP01591 159 aa16.13■□□□□ 0.17
COL7A1-203ENST00000459756 ALPIP09923 528 aa16.13■□□□□ 0.17
COL7A1-203ENST00000459756 CTPS1P17812 591 aa16.13■□□□□ 0.17
COL7A1-203ENST00000459756 FECHP22830 423 aa16.13■□□□□ 0.17
COL7A1-203ENST00000459756 RPIAP49247 311 aa16.13■□□□□ 0.17
COL7A1-203ENST00000459756 EPHB1P54762 984 aa16.13■□□□□ 0.17
COL7A1-203ENST00000459756 TARDBPQ13148 414 aaKnown RBP eCLIP16.13■□□□□ 0.17
COL7A1-203ENST00000459756 TFDP2Q14188 446 aa16.13■□□□□ 0.17
COL7A1-203ENST00000459756 IHHQ14623 411 aa16.13■□□□□ 0.17
COL7A1-203ENST00000459756 NR0B2Q15466 257 aa16.13■□□□□ 0.17
COL7A1-203ENST00000459756 TAZQ16635 292 aa16.13■□□□□ 0.17
COL7A1-203ENST00000459756 C6orf132Q5T0Z8 1188 aa16.13■□□□□ 0.17
COL7A1-203ENST00000459756 DENND2CQ68D51 928 aa16.13■□□□□ 0.17
COL7A1-203ENST00000459756 LVRNQ6Q4G3 990 aa16.13■□□□□ 0.17
COL7A1-203ENST00000459756 RD3Q7Z3Z2 195 aa16.13■□□□□ 0.17
COL7A1-203ENST00000459756 HSD11B1LQ7Z5J1 315 aa16.13■□□□□ 0.17
COL7A1-203ENST00000459756 PROSER1Q86XN7 944 aa16.13■□□□□ 0.17
COL7A1-203ENST00000459756 RFX6Q8HWS3 928 aa16.13■□□□□ 0.17
COL7A1-203ENST00000459756 SCG3Q8WXD2 468 aaKnown RBP16.13■□□□□ 0.17
COL7A1-203ENST00000459756 OLFM3Q96PB7 478 aa16.13■□□□□ 0.17
COL7A1-203ENST00000459756 TDRD1Q9BXT4 1180 aaKnown RBP16.13■□□□□ 0.17
COL7A1-203ENST00000459756 CLPBQ9H078 707 aa16.13■□□□□ 0.17
COL7A1-203ENST00000459756 DNPEPQ9ULA0 475 aa16.13■□□□□ 0.17
COL7A1-203ENST00000459756 CLCA2Q9UQC9 943 aa16.13■□□□□ 0.17
COL7A1-203ENST00000459756 EPN1Q9Y6I3 576 aaPredicted RBP16.13■□□□□ 0.17
COL7A1-203ENST00000459756 A0A0J9YYE9 177 aa16.12■□□□□ 0.17
COL7A1-203ENST00000459756 TMEM202A6NGA9 273 aa16.12■□□□□ 0.17
COL7A1-203ENST00000459756 SRRM3A6NNA2 597 aaPredicted RBP16.12■□□□□ 0.17
COL7A1-203ENST00000459756 YY2O15391 372 aa16.12■□□□□ 0.17
COL7A1-203ENST00000459756 OPA1O60313 960 aa16.12■□□□□ 0.17
COL7A1-203ENST00000459756 KRT37O76014 449 aa16.12■□□□□ 0.17
COL7A1-203ENST00000459756 NDUFA10O95299 355 aa16.12■□□□□ 0.17
COL7A1-203ENST00000459756 TNFP01375 233 aa16.12■□□□□ 0.17
COL7A1-203ENST00000459756 TRBC1P01850 177 aa16.12■□□□□ 0.17
COL7A1-203ENST00000459756 MYF5P13349 255 aa16.12■□□□□ 0.17
COL7A1-203ENST00000459756 ZNF30P17039 623 aa16.12■□□□□ 0.17
COL7A1-203ENST00000459756 ETV3P41162 512 aa16.12■□□□□ 0.17
COL7A1-203ENST00000459756 CDKN2BP42772 138 aa16.12■□□□□ 0.17
COL7A1-203ENST00000459756 NR2C2P49116 596 aa16.12■□□□□ 0.17
COL7A1-203ENST00000459756 CLDN6P56747 220 aa16.12■□□□□ 0.17
COL7A1-203ENST00000459756 NIPAL4Q0D2K0 466 aa16.12■□□□□ 0.17
COL7A1-203ENST00000459756 AP1B1Q10567 949 aa16.12■□□□□ 0.17
COL7A1-203ENST00000459756 C11orf63Q6NUN7 778 aa16.12■□□□□ 0.17
COL7A1-203ENST00000459756 MFSD7Q6UXD7 560 aa16.12■□□□□ 0.17
COL7A1-203ENST00000459756 Q6ZVL8 140 aa16.12■□□□□ 0.17
COL7A1-203ENST00000459756 BZW1Q7L1Q6 419 aaKnown RBP16.12■□□□□ 0.17
COL7A1-203ENST00000459756 TSPAN33Q86UF1 283 aa16.12■□□□□ 0.17
COL7A1-203ENST00000459756 KATNAL2Q8IYT4 538 aa16.12■□□□□ 0.17
COL7A1-203ENST00000459756 DCBLD1Q8N8Z6 715 aa16.12■□□□□ 0.17
COL7A1-203ENST00000459756 OR56A4Q8NGH8 313 aa16.12■□□□□ 0.17
COL7A1-203ENST00000459756 CALR3Q96L12 384 aaKnown RBP16.12■□□□□ 0.17
COL7A1-203ENST00000459756 RBM15Q96T37 977 aaKnown RBP eCLIP16.12■□□□□ 0.17
COL7A1-203ENST00000459756 PCDH9Q9HC56 1237 aa16.12■□□□□ 0.17
COL7A1-203ENST00000459756 DOLKQ9UPQ8 538 aa16.12■□□□□ 0.17
COL7A1-203ENST00000459756 CHKBQ9Y259 395 aa16.12■□□□□ 0.17
COL7A1-203ENST00000459756 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.12■□□□□ 0.17
COL7A1-203ENST00000459756 ANKRD11Q6UB99 2663 aaPredicted RBP16.12■□□□□ 0.17
COL7A1-203ENST00000459756 SOWAHDA6NJG2 315 aa16.11■□□□□ 0.17
COL7A1-203ENST00000459756 PRLP01236 227 aa16.11■□□□□ 0.17
COL7A1-203ENST00000459756 MYCLP1P12525 358 aaPredicted RBP16.11■□□□□ 0.17
COL7A1-203ENST00000459756 TEAD1P28347 426 aa16.11■□□□□ 0.17
COL7A1-203ENST00000459756 DYNLT1P63172 113 aa16.11■□□□□ 0.17
COL7A1-203ENST00000459756 DPTQ07507 201 aa16.11■□□□□ 0.17
COL7A1-203ENST00000459756 ZBTB17Q13105 803 aa16.11■□□□□ 0.17
COL7A1-203ENST00000459756 PTPRRQ15256 657 aa16.11■□□□□ 0.17
COL7A1-203ENST00000459756 CDKN3Q16667 212 aa16.11■□□□□ 0.17
COL7A1-203ENST00000459756 LRRC66Q68CR7 880 aa16.11■□□□□ 0.17
COL7A1-203ENST00000459756 CRTC1Q6UUV9 634 aa16.11■□□□□ 0.17
COL7A1-203ENST00000459756 NPNTQ6UXI9 565 aa16.11■□□□□ 0.17
COL7A1-203ENST00000459756 TECPR1Q7Z6L1 1165 aa16.11■□□□□ 0.17
COL7A1-203ENST00000459756 GKN2Q86XP6 184 aa16.11■□□□□ 0.17
COL7A1-203ENST00000459756 RCOR2Q8IZ40 523 aa16.11■□□□□ 0.17
COL7A1-203ENST00000459756 CNTD1Q8N815 330 aa16.11■□□□□ 0.17
COL7A1-203ENST00000459756 MDM1Q8TC05 714 aa16.11■□□□□ 0.17
COL7A1-203ENST00000459756 IFI44Q8TCB0 444 aa16.11■□□□□ 0.17
COL7A1-203ENST00000459756 OR1E3Q8WZA6 343 aa16.11■□□□□ 0.17
COL7A1-203ENST00000459756 NXPE2Q96DL1 559 aa16.11■□□□□ 0.17
COL7A1-203ENST00000459756 PDXPQ96GD0 296 aa16.11■□□□□ 0.17
COL7A1-203ENST00000459756 TEX101Q9BY14 249 aa16.11■□□□□ 0.17
COL7A1-203ENST00000459756 ABCG4Q9H172 646 aa16.11■□□□□ 0.17
COL7A1-203ENST00000459756 GOLPH3Q9H4A6 298 aa16.11■□□□□ 0.17
COL7A1-203ENST00000459756 FGF22Q9HCT0 170 aa16.11■□□□□ 0.17
COL7A1-203ENST00000459756 PHPT1Q9NRX4 125 aaPredicted RBP16.11■□□□□ 0.17
COL7A1-203ENST00000459756 TFR2Q9UP52 801 aa16.11■□□□□ 0.17
COL7A1-203ENST00000459756 MYLKQ15746 1914 aa16.11■□□□□ 0.17
COL7A1-203ENST00000459756 CFAP47Q6ZTR5 3102 aa16.1■□□□□ 0.17
COL7A1-203ENST00000459756 CPED1A4D0V7 1026 aa16.1■□□□□ 0.17
COL7A1-203ENST00000459756 EME2A4GXA9 379 aaPredicted RBP16.1■□□□□ 0.17
COL7A1-203ENST00000459756 CAPN8A6NHC0 703 aa16.1■□□□□ 0.17
COL7A1-203ENST00000459756 TAF4O00268 1085 aa16.1■□□□□ 0.17
COL7A1-203ENST00000459756 CST8O60676 142 aa16.1■□□□□ 0.17
COL7A1-203ENST00000459756 ZRANB2O95218 330 aaKnown RBP eCLIP16.1■□□□□ 0.17
COL7A1-203ENST00000459756 MT-CO3P00414 261 aa16.1■□□□□ 0.17
COL7A1-203ENST00000459756 CELA2BP08218 269 aaPredicted RBP16.1■□□□□ 0.17
COL7A1-203ENST00000459756 MMP2P08253 660 aa16.1■□□□□ 0.17
COL7A1-203ENST00000459756 CD86P42081 329 aa16.1■□□□□ 0.17
COL7A1-203ENST00000459756 PTSQ03393 145 aa16.1■□□□□ 0.17
COL7A1-203ENST00000459756 TFDP3Q5H9I0 405 aa16.1■□□□□ 0.17
COL7A1-203ENST00000459756 CDCP2Q5VXM1 449 aa16.1■□□□□ 0.17
COL7A1-203ENST00000459756 GUSBP11Q6P575 273 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms