RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 HGFP14210 728 aa21.55■■□□□ 1.04
CPNE1-220ENST00000458038 CCNB1P14635 433 aa21.55■■□□□ 1.04
CPNE1-220ENST00000458038 GM2AP17900 193 aa21.55■■□□□ 1.04
CPNE1-220ENST00000458038 B4GALNT1Q00973 533 aa21.55■■□□□ 1.04
CPNE1-220ENST00000458038 ILF3Q12906 894 aaKnown RBP eCLIP21.55■■□□□ 1.043e-7■■□□□ 12.3
CPNE1-220ENST00000458038 DPYSQ14117 519 aa21.55■■□□□ 1.04
CPNE1-220ENST00000458038 ZNF235Q14590 738 aa21.55■■□□□ 1.04
CPNE1-220ENST00000458038 C17orf82Q86X59 251 aaPredicted RBP21.55■■□□□ 1.04
CPNE1-220ENST00000458038 NUS1Q96E22 293 aa21.55■■□□□ 1.04
CPNE1-220ENST00000458038 PEBP4Q96S96 227 aa21.55■■□□□ 1.04
CPNE1-220ENST00000458038 LGR4Q9BXB1 951 aa21.55■■□□□ 1.04
CPNE1-220ENST00000458038 TEX101Q9BY14 249 aa21.55■■□□□ 1.04
CPNE1-220ENST00000458038 CWC15Q9P013 229 aaKnown RBP21.55■■□□□ 1.04
CPNE1-220ENST00000458038 B4GALT6Q9UBX8 382 aa21.55■■□□□ 1.04
CPNE1-220ENST00000458038 SCINQ9Y6U3 715 aa21.55■■□□□ 1.04
CPNE1-220ENST00000458038 TMCO5BA8MYB1 307 aa21.54■■□□□ 1.04
CPNE1-220ENST00000458038 PSMD11O00231 422 aa21.54■■□□□ 1.04
CPNE1-220ENST00000458038 CYP2A6P11509 494 aaPredicted RBP21.54■■□□□ 1.04
CPNE1-220ENST00000458038 TEAD1P28347 426 aa21.54■■□□□ 1.04
CPNE1-220ENST00000458038 VIPR1P32241 457 aa21.54■■□□□ 1.04
CPNE1-220ENST00000458038 GPR3P46089 330 aa21.54■■□□□ 1.04
CPNE1-220ENST00000458038 SLC10A7Q0GE19 358 aa21.54■■□□□ 1.04
CPNE1-220ENST00000458038 NR1D2Q14995 579 aa21.54■■□□□ 1.04
CPNE1-220ENST00000458038 MANEAQ5SRI9 462 aa21.54■■□□□ 1.04
CPNE1-220ENST00000458038 ARHGAP36Q6ZRI8 547 aa21.54■■□□□ 1.04
CPNE1-220ENST00000458038 CYP4V2Q6ZWL3 525 aaPredicted RBP21.54■■□□□ 1.04
CPNE1-220ENST00000458038 ZNF438Q7Z4V0 828 aa21.54■■□□□ 1.04
CPNE1-220ENST00000458038 NPWQ8N729 165 aa21.54■■□□□ 1.04
CPNE1-220ENST00000458038 TRIM11Q96F44 468 aa21.54■■□□□ 1.04
CPNE1-220ENST00000458038 NUDCD1Q96RS6 583 aa21.54■■□□□ 1.04
CPNE1-220ENST00000458038 CARS2Q9HA77 564 aaKnown RBP21.54■■□□□ 1.04
CPNE1-220ENST00000458038 MRPL47Q9HD33 250 aaKnown RBP21.54■■□□□ 1.04
CPNE1-220ENST00000458038 PHTF1Q9UMS5 762 aa21.54■■□□□ 1.04
CPNE1-220ENST00000458038 PRAMEF33A0A0G2JMD5 474 aa21.53■■□□□ 1.04
CPNE1-220ENST00000458038 RHPN2P1A8MT19 583 aa21.53■■□□□ 1.04
CPNE1-220ENST00000458038 A8MX80 341 aa21.53■■□□□ 1.04
CPNE1-220ENST00000458038 IQCJ-SCHIP1C9J366 451 aaPredicted RBP21.53■■□□□ 1.04
CPNE1-220ENST00000458038 H3BRJ5 948 aa21.53■■□□□ 1.04
CPNE1-220ENST00000458038 HGSO14964 777 aaPredicted RBP21.53■■□□□ 1.04
CPNE1-220ENST00000458038 PRAMEF10O60809 474 aa21.53■■□□□ 1.04
CPNE1-220ENST00000458038 FTLP02792 175 aaPredicted RBP21.53■■□□□ 1.04
CPNE1-220ENST00000458038 KRT10P13645 584 aa21.53■■□□□ 1.04
CPNE1-220ENST00000458038 PCK1P35558 622 aa21.53■■□□□ 1.04
CPNE1-220ENST00000458038 ARL4AP40617 200 aa21.53■■□□□ 1.04
CPNE1-220ENST00000458038 TGIF1Q15583 401 aa21.53■■□□□ 1.04
CPNE1-220ENST00000458038 MAP9Q49MG5 647 aa21.53■■□□□ 1.04
CPNE1-220ENST00000458038 BOLA3Q53S33 107 aa21.53■■□□□ 1.04
CPNE1-220ENST00000458038 PHF19Q5T6S3 580 aa21.53■■□□□ 1.04
CPNE1-220ENST00000458038 CBARPQ8N350 705 aaPredicted RBP21.53■■□□□ 1.04
CPNE1-220ENST00000458038 NSMCE1Q8WV22 266 aa21.53■■□□□ 1.04
CPNE1-220ENST00000458038 USP7Q93009 1102 aa21.53■■□□□ 1.04
CPNE1-220ENST00000458038 ARHGAP9Q9BRR9 750 aa21.53■■□□□ 1.04
CPNE1-220ENST00000458038 CLMPQ9H6B4 373 aa21.53■■□□□ 1.04
CPNE1-220ENST00000458038 SPATS2LQ9NUQ6 558 aaKnown RBP21.53■■□□□ 1.04
CPNE1-220ENST00000458038 SLC28A2O43868 658 aa21.52■■□□□ 1.04
CPNE1-220ENST00000458038 LRCH4O75427 683 aa21.52■■□□□ 1.04
CPNE1-220ENST00000458038 HEXIM1O94992 359 aaKnown RBP21.52■■□□□ 1.04
CPNE1-220ENST00000458038 CPP00450 1065 aa21.52■■□□□ 1.04
CPNE1-220ENST00000458038 FGF1P05230 155 aa21.52■■□□□ 1.04
CPNE1-220ENST00000458038 CEACAM5P06731 702 aa21.52■■□□□ 1.04
CPNE1-220ENST00000458038 MYBL1P10243 752 aa21.52■■□□□ 1.04
CPNE1-220ENST00000458038 ITIH1P19827 911 aa21.52■■□□□ 1.04
CPNE1-220ENST00000458038 CR2P20023 1033 aa21.52■■□□□ 1.04
CPNE1-220ENST00000458038 KCNC4Q03721 635 aa21.52■■□□□ 1.04
CPNE1-220ENST00000458038 NCAPHQ15003 741 aa21.52■■□□□ 1.04
CPNE1-220ENST00000458038 CNGA3Q16281 694 aa21.52■■□□□ 1.04
CPNE1-220ENST00000458038 DPYSL2Q16555 572 aa21.52■■□□□ 1.04
CPNE1-220ENST00000458038 TMCO3Q6UWJ1 677 aa21.52■■□□□ 1.04
CPNE1-220ENST00000458038 HEATR4Q86WZ0 1026 aa21.52■■□□□ 1.04
CPNE1-220ENST00000458038 DTX1Q86Y01 620 aa21.52■■□□□ 1.04
CPNE1-220ENST00000458038 EXD3Q8N9H8 876 aa21.52■■□□□ 1.04
CPNE1-220ENST00000458038 CCL4L1Q8NHW4 92 aa21.52■■□□□ 1.04
CPNE1-220ENST00000458038 ZDHHC1Q8WTX9 485 aa21.52■■□□□ 1.04
CPNE1-220ENST00000458038 DTD2Q96FN9 168 aa21.52■■□□□ 1.04
CPNE1-220ENST00000458038 DPYSL5Q9BPU6 564 aa21.52■■□□□ 1.04
CPNE1-220ENST00000458038 FRMD8Q9BZ67 464 aaPredicted RBP21.52■■□□□ 1.04
CPNE1-220ENST00000458038 FAM117AQ9C073 453 aa21.52■■□□□ 1.04
CPNE1-220ENST00000458038 HSD3B7Q9H2F3 369 aa21.52■■□□□ 1.04
CPNE1-220ENST00000458038 AIPL1Q9NZN9 384 aa21.52■■□□□ 1.04
CPNE1-220ENST00000458038 TAAR2Q9P1P5 351 aa21.52■■□□□ 1.04
CPNE1-220ENST00000458038 CNOT8Q9UFF9 292 aaKnown RBP21.52■■□□□ 1.04
CPNE1-220ENST00000458038 PCDHGC4Q9Y5F7 938 aa21.52■■□□□ 1.04
CPNE1-220ENST00000458038 HEMK1Q9Y5R4 338 aaPredicted RBP21.52■■□□□ 1.04
CPNE1-220ENST00000458038 ATMINO43313 823 aaPredicted RBP21.51■■□□□ 1.03
CPNE1-220ENST00000458038 B4GAT1O43505 415 aa21.51■■□□□ 1.03
CPNE1-220ENST00000458038 MAPK10P53779 464 aa21.51■■□□□ 1.03
CPNE1-220ENST00000458038 BIRC2Q13490 618 aa21.51■■□□□ 1.03
CPNE1-220ENST00000458038 SQSTM1Q13501 440 aa21.51■■□□□ 1.03
CPNE1-220ENST00000458038 TRA2AQ13595 282 aaKnown RBP eCLIP21.51■■□□□ 1.03
CPNE1-220ENST00000458038 ASIC2Q16515 512 aa21.51■■□□□ 1.03
CPNE1-220ENST00000458038 LINC00303Q3SY05 128 aa21.51■■□□□ 1.03
CPNE1-220ENST00000458038 NRROSQ86YC3 692 aa21.51■■□□□ 1.03
CPNE1-220ENST00000458038 LRRC49Q8IUZ0 686 aa21.51■■□□□ 1.03
CPNE1-220ENST00000458038 NDUFAF2Q8N183 169 aa21.51■■□□□ 1.03
CPNE1-220ENST00000458038 PDCD6IPQ8WUM4 868 aaKnown RBP21.51■■□□□ 1.03
CPNE1-220ENST00000458038 SCRN2Q96FV2 425 aa21.51■■□□□ 1.03
CPNE1-220ENST00000458038 NSMCE3Q96MG7 304 aa21.51■■□□□ 1.03
CPNE1-220ENST00000458038 GBP4Q96PP9 640 aa21.51■■□□□ 1.03
CPNE1-220ENST00000458038 SEMA3CQ99985 751 aa21.51■■□□□ 1.03
CPNE1-220ENST00000458038 MGME1Q9BQP7 344 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms