RNA–Protein interactions for RNA: ENST00000456380.5

TRA2B-206, Transcript of transformer 2 beta homolog, humanhuman

TSL 5

Gene TRA2B, Length 1,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-206ENST00000456380 ACOX1Q15067 660 aa12.41□□□□□ -0.42
TRA2B-206ENST00000456380 TSR1Q2NL82 804 aaKnown RBP12.41□□□□□ -0.42
TRA2B-206ENST00000456380 DCUN1D2Q6PH85 259 aa12.41□□□□□ -0.42
TRA2B-206ENST00000456380 MCOLN2Q8IZK6 566 aa12.41□□□□□ -0.42
TRA2B-206ENST00000456380 ARFGAP1Q8N6T3 406 aa12.41□□□□□ -0.42
TRA2B-206ENST00000456380 RCBTB1Q8NDN9 531 aa12.41□□□□□ -0.42
TRA2B-206ENST00000456380 ZDHHC1Q8WTX9 485 aa12.41□□□□□ -0.42
TRA2B-206ENST00000456380 FUCA2Q9BTY2 467 aa12.41□□□□□ -0.42
TRA2B-206ENST00000456380 NUP62CLQ9H1M0 184 aa12.41□□□□□ -0.42
TRA2B-206ENST00000456380 DHX35Q9H5Z1 703 aaKnown RBP12.41□□□□□ -0.42
TRA2B-206ENST00000456380 SUDS3Q9H7L9 328 aaPredicted RBP12.41□□□□□ -0.42
TRA2B-206ENST00000456380 CARS2Q9HA77 564 aaKnown RBP12.41□□□□□ -0.42
TRA2B-206ENST00000456380 B4GALT6Q9UBX8 382 aa12.41□□□□□ -0.42
TRA2B-206ENST00000456380 ST14Q9Y5Y6 855 aa12.41□□□□□ -0.42
TRA2B-206ENST00000456380 LRRK2Q5S007 2527 aa12.41□□□□□ -0.42
TRA2B-206ENST00000456380 IGHV5-10-1A0A0J9YXX1 117 aa12.4□□□□□ -0.42
TRA2B-206ENST00000456380 RHPN2P1A8MT19 583 aa12.4□□□□□ -0.42
TRA2B-206ENST00000456380 PDE2AO00408 941 aaPredicted RBP12.4□□□□□ -0.42
TRA2B-206ENST00000456380 ECEL1O95672 775 aa12.4□□□□□ -0.42
TRA2B-206ENST00000456380 FGF3P11487 239 aaPredicted RBP12.4□□□□□ -0.42
TRA2B-206ENST00000456380 MYCLP1P12525 358 aaPredicted RBP12.4□□□□□ -0.42
TRA2B-206ENST00000456380 ERCC2P18074 760 aa12.4□□□□□ -0.42
TRA2B-206ENST00000456380 AK4P27144 223 aaPredicted RBP12.4□□□□□ -0.42
TRA2B-206ENST00000456380 CD1CP29017 333 aa12.4□□□□□ -0.42
TRA2B-206ENST00000456380 RFTN1Q14699 578 aaPredicted RBP12.4□□□□□ -0.42
TRA2B-206ENST00000456380 NR1D2Q14995 579 aa12.4□□□□□ -0.42
TRA2B-206ENST00000456380 TMEM164Q5U3C3 297 aa12.4□□□□□ -0.42
TRA2B-206ENST00000456380 ACAD10Q6JQN1 1059 aa12.4□□□□□ -0.42
TRA2B-206ENST00000456380 TP53INP2Q8IXH6 220 aa12.4□□□□□ -0.42
TRA2B-206ENST00000456380 NPWQ8N729 165 aa12.4□□□□□ -0.42
TRA2B-206ENST00000456380 PAF1Q8N7H5 531 aa12.4□□□□□ -0.42
TRA2B-206ENST00000456380 PTCD2Q8WV60 388 aaKnown RBP12.4□□□□□ -0.42
TRA2B-206ENST00000456380 PATE1Q8WXA2 126 aa12.4□□□□□ -0.42
TRA2B-206ENST00000456380 PMEPA1Q969W9 287 aa12.4□□□□□ -0.42
TRA2B-206ENST00000456380 PSKH2Q96QS6 385 aa12.4□□□□□ -0.42
TRA2B-206ENST00000456380 PEBP4Q96S96 227 aa12.4□□□□□ -0.42
TRA2B-206ENST00000456380 KCTD15Q96SI1 283 aaPredicted RBP12.4□□□□□ -0.42
TRA2B-206ENST00000456380 TEX101Q9BY14 249 aa12.4□□□□□ -0.42
TRA2B-206ENST00000456380 SP110Q9HB58 689 aa12.4□□□□□ -0.42
TRA2B-206ENST00000456380 FANCLQ9NW38 375 aa12.4□□□□□ -0.42
TRA2B-206ENST00000456380 TAS2R14Q9NYV8 317 aa12.4□□□□□ -0.42
TRA2B-206ENST00000456380 TAAR2Q9P1P5 351 aa12.4□□□□□ -0.42
TRA2B-206ENST00000456380 NBASA2RRP1 2371 aa12.39□□□□□ -0.43
TRA2B-206ENST00000456380 STMND1H3BQB6 276 aa12.39□□□□□ -0.43
TRA2B-206ENST00000456380 DFFAO00273 331 aa12.39□□□□□ -0.43
TRA2B-206ENST00000456380 TPM2P07951 284 aa12.39□□□□□ -0.43
TRA2B-206ENST00000456380 COPB1P53618 953 aaKnown RBP12.39□□□□□ -0.43
TRA2B-206ENST00000456380 IL10RBQ08334 325 aa12.39□□□□□ -0.43
TRA2B-206ENST00000456380 MAMLD1Q13495 774 aa12.39□□□□□ -0.43
TRA2B-206ENST00000456380 CNGA3Q16281 694 aa12.39□□□□□ -0.43
TRA2B-206ENST00000456380 ERMARDQ5T6L9 678 aa12.39□□□□□ -0.43
TRA2B-206ENST00000456380 RFX8Q6ZV50 586 aa12.39□□□□□ -0.43
TRA2B-206ENST00000456380 HEATR4Q86WZ0 1026 aa12.39□□□□□ -0.43
TRA2B-206ENST00000456380 CBARPQ8N350 705 aaPredicted RBP12.39□□□□□ -0.43
TRA2B-206ENST00000456380 NEK11Q8NG66 645 aa12.39□□□□□ -0.43
TRA2B-206ENST00000456380 SPOCK2Q92563 424 aa12.39□□□□□ -0.43
TRA2B-206ENST00000456380 NKD1Q969G9 470 aa12.39□□□□□ -0.43
TRA2B-206ENST00000456380 NUS1Q96E22 293 aa12.39□□□□□ -0.43
TRA2B-206ENST00000456380 PCMTD1Q96MG8 357 aaPredicted RBP12.39□□□□□ -0.43
TRA2B-206ENST00000456380 SNRNP25Q9BV90 132 aaKnown RBP12.39□□□□□ -0.43
TRA2B-206ENST00000456380 SLC12A9Q9BXP2 914 aa12.39□□□□□ -0.43
TRA2B-206ENST00000456380 FRMD8Q9BZ67 464 aaPredicted RBP12.39□□□□□ -0.43
TRA2B-206ENST00000456380 SLC25A18Q9H1K4 315 aa12.39□□□□□ -0.43
TRA2B-206ENST00000456380 GEMIN8Q9NWZ8 242 aaKnown RBP12.39□□□□□ -0.43
TRA2B-206ENST00000456380 TRNAU1APQ9NX07 287 aaKnown RBP12.39□□□□□ -0.43
TRA2B-206ENST00000456380 AKAP7Q9P0M2 348 aaPredicted RBP12.39□□□□□ -0.43
TRA2B-206ENST00000456380 PCSK1NQ9UHG2 260 aa12.39□□□□□ -0.43
TRA2B-206ENST00000456380 SUFUQ9UMX1 484 aa12.39□□□□□ -0.43
TRA2B-206ENST00000456380 PCDHGC4Q9Y5F7 938 aa12.39□□□□□ -0.43
TRA2B-206ENST00000456380 NBPF19A0A087WUL8 3843 aa12.39□□□□□ -0.43
TRA2B-206ENST00000456380 SDK2Q58EX2 2172 aa12.39□□□□□ -0.43
TRA2B-206ENST00000456380 EIF3CLB5ME19 914 aaKnown RBP12.38□□□□□ -0.43
TRA2B-206ENST00000456380 HGSO14964 777 aaPredicted RBP12.38□□□□□ -0.43
TRA2B-206ENST00000456380 DAPK3O43293 454 aa12.38□□□□□ -0.43
TRA2B-206ENST00000456380 HTRA2O43464 458 aaPredicted RBP12.38□□□□□ -0.43
TRA2B-206ENST00000456380 PPFIA2O75334 1257 aa12.38□□□□□ -0.43
TRA2B-206ENST00000456380 LIMK2P53671 638 aa12.38□□□□□ -0.43
TRA2B-206ENST00000456380 AP1S1P61966 158 aa12.38□□□□□ -0.43
TRA2B-206ENST00000456380 SLC10A7Q0GE19 358 aa12.38□□□□□ -0.43
TRA2B-206ENST00000456380 ILF3Q12906 894 aaKnown RBP eCLIP12.38□□□□□ -0.43
TRA2B-206ENST00000456380 CLPPQ16740 277 aaPredicted RBP12.38□□□□□ -0.43
TRA2B-206ENST00000456380 NKAIN2Q5VXU1 208 aa12.38□□□□□ -0.43
TRA2B-206ENST00000456380 SLC30A9Q6PML9 568 aa12.38□□□□□ -0.43
TRA2B-206ENST00000456380 CYP4V2Q6ZWL3 525 aaPredicted RBP12.38□□□□□ -0.43
TRA2B-206ENST00000456380 NAGSQ8N159 534 aa12.38□□□□□ -0.43
TRA2B-206ENST00000456380 CCDC74BQ96LY2 380 aa12.38□□□□□ -0.43
TRA2B-206ENST00000456380 TAAR9Q96RI9 348 aa12.38□□□□□ -0.43
TRA2B-206ENST00000456380 EIF3CQ99613 913 aaKnown RBP12.38□□□□□ -0.43
TRA2B-206ENST00000456380 GSDMCQ9BYG8 508 aa12.38□□□□□ -0.43
TRA2B-206ENST00000456380 PHPT1Q9NRX4 125 aaPredicted RBP12.38□□□□□ -0.43
TRA2B-206ENST00000456380 PCDHGA3Q9Y5H0 932 aa12.38□□□□□ -0.43
TRA2B-206ENST00000456380 LGALS16A8MUM7 142 aa12.38□□□□□ -0.43
TRA2B-206ENST00000456380 PPM1DO15297 605 aa12.38□□□□□ -0.43
TRA2B-206ENST00000456380 HEXIM1O94992 359 aaKnown RBP12.38□□□□□ -0.43
TRA2B-206ENST00000456380 DESP17661 470 aa12.38□□□□□ -0.43
TRA2B-206ENST00000456380 PSMA2P25787 234 aa12.38□□□□□ -0.43
TRA2B-206ENST00000456380 ETV3P41162 512 aa12.38□□□□□ -0.43
TRA2B-206ENST00000456380 GPR3P46089 330 aa12.38□□□□□ -0.43
TRA2B-206ENST00000456380 GNPDA1P46926 289 aa12.38□□□□□ -0.43
TRA2B-206ENST00000456380 POLD2P49005 469 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms