RNA–Protein interactions for RNA: ENST00000455372.2

SLC39A3-202, Transcript of solute carrier family 39 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC39A3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A3-202ENST00000455372 GNA12Q03113 381 aa18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 BTG3Q14201 252 aaPredicted RBP18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 C5orf22Q49AR2 442 aa18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 ALG1LQ6GMV1 187 aa18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 BHLHE22Q8NFJ8 381 aaPredicted RBP18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 OR4L1Q8NH43 312 aa18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 BCL7CQ8WUZ0 217 aaPredicted RBP18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 CATSPERZQ9NTU4 200 aa18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 ADAM12O43184 909 aa18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 ACSL4O60488 711 aa18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 CDH13P55290 713 aa18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 IL31Q6EBC2 164 aa18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 FAM156AQ8NDB6 213 aa18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 ZNF599Q96NL3 588 aa18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 SPO11Q9Y5K1 396 aa18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 ATP6AP2A0A1C7CYW4 349 aa18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 ATP6AP2O75787 350 aa18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 NDST3O95803 873 aa18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 ZNF37AP17032 561 aaPredicted RBP18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 KPNA1P52294 538 aaPredicted RBP18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 RPS24P62847 133 aaKnown RBP18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 HERVK_113P63132 956 aa18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 NFKB2Q00653 900 aa18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 FASTKQ14296 549 aaKnown RBP18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 SQLEQ14534 574 aa18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 OR4D1Q15615 310 aa18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 TCTN1Q2MV58 587 aa18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 GRAMD1BQ3KR37 738 aa18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 OGFRL1Q5TC84 451 aaPredicted RBP18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 LHX8Q68G74 356 aa18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 PCDH20Q8N6Y1 951 aaKnown RBP18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 EXOC2Q96KP1 924 aa18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 MGME1Q9BQP7 344 aa18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 TRMOQ9BU70 441 aa18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 SPON2Q9BUD6 331 aa18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 ERVK-6Q9BXR3 956 aa18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 MRPL1Q9BYD6 325 aaKnown RBP18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 COMMD8Q9NX08 183 aa18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 CCDC167Q9P0B6 97 aa18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 PCDHGA7Q9Y5G6 932 aa18.29■□□□□ 0.52
SLC39A3-202ENST00000455372 H3BMM5 538 aa18.28■□□□□ 0.52
SLC39A3-202ENST00000455372 H3BNC9 293 aa18.28■□□□□ 0.52
SLC39A3-202ENST00000455372 PSMD12O00232 456 aaPredicted RBP18.28■□□□□ 0.52
SLC39A3-202ENST00000455372 GJB5O95377 273 aa18.28■□□□□ 0.52
SLC39A3-202ENST00000455372 PENKP01210 267 aaPredicted RBP18.28■□□□□ 0.52
SLC39A3-202ENST00000455372 UQCRBP14927 111 aa18.28■□□□□ 0.52
SLC39A3-202ENST00000455372 TCN1P20061 433 aaPredicted RBP18.28■□□□□ 0.52
SLC39A3-202ENST00000455372 ALDH1A3P47895 512 aa18.28■□□□□ 0.52
SLC39A3-202ENST00000455372 STC1P52823 247 aa18.28■□□□□ 0.52
SLC39A3-202ENST00000455372 XIAPP98170 497 aa18.28■□□□□ 0.52
SLC39A3-202ENST00000455372 PTK2BQ14289 1009 aa18.28■□□□□ 0.52
SLC39A3-202ENST00000455372 AGKQ53H12 422 aa18.28■□□□□ 0.52
SLC39A3-202ENST00000455372 MAGEH1Q9H213 219 aa18.28■□□□□ 0.52
SLC39A3-202ENST00000455372 LRRC14BA6NHZ5 514 aa18.28■□□□□ 0.52
SLC39A3-202ENST00000455372 PPP6CO00743 305 aa18.28■□□□□ 0.52
SLC39A3-202ENST00000455372 FBP2O00757 339 aa18.28■□□□□ 0.52
SLC39A3-202ENST00000455372 SIX3O95343 332 aaPredicted RBP18.28■□□□□ 0.52
SLC39A3-202ENST00000455372 GALTP07902 379 aa18.28■□□□□ 0.52
SLC39A3-202ENST00000455372 SUOXP51687 545 aa18.28■□□□□ 0.52
SLC39A3-202ENST00000455372 LAMB3Q13751 1172 aa18.28■□□□□ 0.52
SLC39A3-202ENST00000455372 PTGR2Q8N8N7 351 aaPredicted RBP18.28■□□□□ 0.52
SLC39A3-202ENST00000455372 CDKN2AIPNLQ96HQ2 116 aa18.28■□□□□ 0.52
SLC39A3-202ENST00000455372 C3orf30Q96M34 536 aa18.28■□□□□ 0.52
SLC39A3-202ENST00000455372 SMIM14Q96QK8 99 aa18.28■□□□□ 0.52
SLC39A3-202ENST00000455372 TSEN34Q9BSV6 310 aaKnown RBP18.28■□□□□ 0.52
SLC39A3-202ENST00000455372 C6orf203Q9P0P8 240 aaPredicted RBP18.28■□□□□ 0.52
SLC39A3-202ENST00000455372 DNMT3LQ9UJW3 386 aa18.28■□□□□ 0.52
SLC39A3-202ENST00000455372 UBXN8O00124 270 aa18.27■□□□□ 0.52
SLC39A3-202ENST00000455372 ACOT8O14734 319 aa18.27■□□□□ 0.52
SLC39A3-202ENST00000455372 PEX1O43933 1283 aa18.27■□□□□ 0.52
SLC39A3-202ENST00000455372 SMIM24O75264 130 aa18.27■□□□□ 0.52
SLC39A3-202ENST00000455372 GPC4O75487 556 aa18.27■□□□□ 0.52
SLC39A3-202ENST00000455372 BCAS2O75934 225 aaPredicted RBP18.27■□□□□ 0.52
SLC39A3-202ENST00000455372 ATP5C1P36542 298 aaKnown RBP18.27■□□□□ 0.52
SLC39A3-202ENST00000455372 SH3BP2P78314 561 aa18.27■□□□□ 0.52
SLC39A3-202ENST00000455372 PRICKLE1Q96MT3 831 aaPredicted RBP18.27■□□□□ 0.52
SLC39A3-202ENST00000455372 TTPALQ9BTX7 342 aa18.27■□□□□ 0.52
SLC39A3-202ENST00000455372 TTLL2Q9BWV7 592 aa18.27■□□□□ 0.52
SLC39A3-202ENST00000455372 FBRSL1Q9HCM7 1045 aaKnown RBP18.27■□□□□ 0.52
SLC39A3-202ENST00000455372 CACNA2D2Q9NY47 1150 aa18.27■□□□□ 0.52
SLC39A3-202ENST00000455372 UTP6Q9NYH9 597 aaKnown RBP18.27■□□□□ 0.52
SLC39A3-202ENST00000455372 ASB3Q9Y575 518 aa18.27■□□□□ 0.52
SLC39A3-202ENST00000455372 H7C4K7 107 aa18.27■□□□□ 0.52
SLC39A3-202ENST00000455372 ARVCFO00192 962 aa18.27■□□□□ 0.52
SLC39A3-202ENST00000455372 AOC2O75106 756 aa18.27■□□□□ 0.52
SLC39A3-202ENST00000455372 MTHFD2P13995 350 aa18.27■□□□□ 0.52
SLC39A3-202ENST00000455372 OGNP20774 298 aaKnown RBP18.27■□□□□ 0.52
SLC39A3-202ENST00000455372 PMLP29590 882 aa18.27■□□□□ 0.52
SLC39A3-202ENST00000455372 PSME3P61289 254 aa18.27■□□□□ 0.52
SLC39A3-202ENST00000455372 SMARCB1Q12824 385 aa18.27■□□□□ 0.52
SLC39A3-202ENST00000455372 UGT3A2Q3SY77 523 aa18.27■□□□□ 0.52
SLC39A3-202ENST00000455372 FOXB2Q5VYV0 432 aa18.27■□□□□ 0.52
SLC39A3-202ENST00000455372 ANKS3Q6ZW76 656 aa18.27■□□□□ 0.52
SLC39A3-202ENST00000455372 LARP4Q71RC2 724 aaKnown RBP eCLIP18.27■□□□□ 0.525e-7■□□□□ 10.6
SLC39A3-202ENST00000455372 DENND1CQ8IV53 801 aa18.27■□□□□ 0.52
SLC39A3-202ENST00000455372 APLFQ8IW19 511 aaPredicted RBP18.27■□□□□ 0.52
SLC39A3-202ENST00000455372 OR9I1Q8NGQ6 314 aa18.27■□□□□ 0.52
SLC39A3-202ENST00000455372 CD99L2Q8TCZ2 262 aa18.27■□□□□ 0.52
SLC39A3-202ENST00000455372 PSKH2Q96QS6 385 aa18.27■□□□□ 0.52
SLC39A3-202ENST00000455372 AARSD1Q9BTE6 412 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms