RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 BTBD8Q5XKL5 378 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 PIWIL3Q7Z3Z3 882 aaKnown RBP13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 UNC93AQ86WB7 457 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 ANKRD13AQ8IZ07 590 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 NPWQ8N729 165 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 TWIST2Q8WVJ9 160 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 TFAP2CQ92754 450 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 POLE4Q9NR33 117 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 MPP6Q9NZW5 540 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 VWA7Q9Y334 891 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 ZNFX1Q9P2E3 1918 aaKnown RBP13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 NME4O00746 187 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 SLC22A2O15244 555 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 CD4P01730 458 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 LGALS2P05162 132 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 BDNFP23560 247 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 SEPHS1P49903 392 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 NRG1Q02297 640 aaPredicted RBP13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 TMEM53Q6P2H8 277 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 DCDC5Q6ZRR9 648 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 OR7A2PQ8NGA2 310 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 HASPINQ8TF76 798 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 KLHL5Q96PQ7 755 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 GMLQ99445 158 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 TBC1D30Q9Y2I9 924 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 KATNA1O75449 491 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 BEST1O76090 585 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 ALDH3B2P48448 385 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 TPTEP56180 551 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 RFTN1Q14699 578 aaPredicted RBP13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 SV2CQ496J9 727 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 ZNF789Q5FWF6 425 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 HECTD2Q5U5R9 776 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 NOTUMQ6P988 496 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 Q6ZNX1 250 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 DPP9Q86TI2 863 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 YIPF2Q9BWQ6 316 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 GOLGA8CPA6NN73 597 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 UBXN8O00124 270 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 PPP6CO00743 305 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 COL6A2P12110 1019 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 CYP4B1P13584 511 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 VARSP26640 1264 aaKnown RBP13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 TKTP29401 623 aaKnown RBP13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 POU4F1Q01851 419 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 CCNYL2Q5T2Q4 361 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 C9orf57Q5W0N0 161 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 FAM126BQ8IXS8 530 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 CPSF7Q8N684 471 aaKnown RBP13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 HERC2P3Q9BVR0 1158 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 NPLQ9BXD5 320 aaPredicted RBP13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 PALMDQ9NP74 551 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 CD274Q9NZQ7 290 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 TSPAN1O60635 241 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 FUCA1P04066 466 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 GSK3BP49841 420 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 DIO3P55073 304 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 DAB2P98082 770 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 GRB7Q14451 532 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 ZNF484Q5JVG2 852 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 GLYATQ6IB77 296 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 SLC15A3Q8IY34 581 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 RMDN1Q96DB5 314 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 CCDC97Q96F63 343 aaPredicted RBP13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 COLEC11Q9BWP8 271 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 PCDHGA4Q9Y5G9 962 aa13.87□□□□□ -0.19
UBE2D3-210ENST00000453744 XYLBO75191 536 aa13.86□□□□□ -0.19
UBE2D3-210ENST00000453744 DAB1O75553 588 aa13.86□□□□□ -0.19
UBE2D3-210ENST00000453744 GABRB3P28472 473 aa13.86□□□□□ -0.19
UBE2D3-210ENST00000453744 CD68P34810 354 aaPredicted RBP13.86□□□□□ -0.19
UBE2D3-210ENST00000453744 SERPINB10P48595 397 aa13.86□□□□□ -0.19
UBE2D3-210ENST00000453744 WNT3AP56704 352 aa13.86□□□□□ -0.19
UBE2D3-210ENST00000453744 PRMT9Q6P2P2 845 aa13.86□□□□□ -0.19
UBE2D3-210ENST00000453744 CCDC103Q8IW40 242 aa13.86□□□□□ -0.19
UBE2D3-210ENST00000453744 TRPV3Q8NET8 790 aa13.86□□□□□ -0.19
UBE2D3-210ENST00000453744 HOPXQ9BPY8 73 aaPredicted RBP13.86□□□□□ -0.19
UBE2D3-210ENST00000453744 RHOBTB2Q9BYZ6 727 aa13.86□□□□□ -0.19
UBE2D3-210ENST00000453744 RCOR3Q9P2K3 495 aaPredicted RBP13.86□□□□□ -0.19
UBE2D3-210ENST00000453744 VPS51Q9UID3 782 aa13.86□□□□□ -0.19
UBE2D3-210ENST00000453744 MAGED1Q9Y5V3 778 aaPredicted RBP13.86□□□□□ -0.19
UBE2D3-210ENST00000453744 GPC6Q9Y625 555 aaPredicted RBP13.86□□□□□ -0.19
UBE2D3-210ENST00000453744 KANSL1LA0AUZ9 987 aa13.86□□□□□ -0.19
UBE2D3-210ENST00000453744 H0Y626 953 aa13.86□□□□□ -0.19
UBE2D3-210ENST00000453744 GABBR2O75899 941 aa13.86□□□□□ -0.19
UBE2D3-210ENST00000453744 TRIM16O95361 564 aa13.86□□□□□ -0.19
UBE2D3-210ENST00000453744 CD86P42081 329 aa13.86□□□□□ -0.19
UBE2D3-210ENST00000453744 TNK2Q07912 1038 aa13.86□□□□□ -0.19
UBE2D3-210ENST00000453744 NFATC3Q12968 1075 aa13.86□□□□□ -0.19
UBE2D3-210ENST00000453744 BNIP2Q12982 314 aa13.86□□□□□ -0.19
UBE2D3-210ENST00000453744 LAPTM5Q13571 262 aa13.86□□□□□ -0.19
UBE2D3-210ENST00000453744 LRP8Q14114 963 aa13.86□□□□□ -0.19
UBE2D3-210ENST00000453744 MOGQ16653 247 aa13.86□□□□□ -0.19
UBE2D3-210ENST00000453744 FAM98BQ52LJ0 330 aaKnown RBP13.86□□□□□ -0.19
UBE2D3-210ENST00000453744 RNF19BQ6ZMZ0 732 aa13.86□□□□□ -0.19
UBE2D3-210ENST00000453744 MILR1Q7Z6M3 343 aa13.86□□□□□ -0.19
UBE2D3-210ENST00000453744 FBXO39Q8N4B4 442 aa13.86□□□□□ -0.19
UBE2D3-210ENST00000453744 LRRC58Q96CX6 371 aa13.86□□□□□ -0.19
UBE2D3-210ENST00000453744 VAT1Q99536 393 aa13.86□□□□□ -0.19
UBE2D3-210ENST00000453744 CPA4Q9UI42 421 aa13.86□□□□□ -0.19
UBE2D3-210ENST00000453744 WDR37Q9Y2I8 494 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms