RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 PRKCGP05129 697 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 DPEP1P16444 411 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 HLA-DPA1P20036 260 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 EFNA1P20827 205 aaPredicted RBP12.42□□□□□ -0.42
UBE3B-204ENST00000449510 MAGEA8P43361 318 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 ZNF829Q3KNS6 432 aaPredicted RBP12.42□□□□□ -0.42
UBE3B-204ENST00000449510 MRNIPQ6NTE8 343 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 CLYBLQ8N0X4 340 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 KBTBD7Q8WVZ9 684 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 CDK15Q96Q40 435 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 AKTIPQ9H8T0 292 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 TRMT13Q9NUP7 481 aaKnown RBP12.42□□□□□ -0.42
UBE3B-204ENST00000449510 AASSQ9UDR5 926 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 TNFSF13BQ9Y275 285 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 ANKRD6Q9Y2G4 727 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 PNMA8CA0A1B0GUJ8 204 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 RBM47A0AV96 593 aaKnown RBP12.41□□□□□ -0.42
UBE3B-204ENST00000449510 FAM72CH0Y354 149 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 SOAT2O75908 522 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 RGS20O76081 388 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 LRATO95237 230 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 SMIM18P0DKX4 95 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 AQP1P29972 269 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 ICAM3P32942 547 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 ST13P50502 369 aaKnown RBP12.41□□□□□ -0.42
UBE3B-204ENST00000449510 DIO3P55073 304 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 WNT3AP56704 352 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 COPZ1P61923 177 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 SLC13A2Q13183 592 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 TRIP4Q15650 581 aaPredicted RBP12.41□□□□□ -0.42
UBE3B-204ENST00000449510 AP5B1Q2VPB7 878 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 FAM72AQ5TYM5 149 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 MARC1Q5VT66 337 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 FAM72DQ6L9T8 149 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 FAM72BQ86X60 149 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 SLC22A9Q8IVM8 553 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 MCFD2Q8NI22 146 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 PRRG3Q9BZD7 231 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 PNPLA8Q9NP80 782 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 INVSQ9Y283 1065 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 NUP188Q5SRE5 1749 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 AURKAO14965 403 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 FBXO21O94952 628 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 MLNP12872 115 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 FMO3P31513 532 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 ARRB2P32121 409 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 DEFA1P59665 94 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 DEFA3P59666 94 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 TRAF3Q13114 568 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 DCAF4L1Q3SXM0 396 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 ARMC4Q5T2S8 1044 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 PGM2L1Q6PCE3 622 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 TWIST2Q8WVJ9 160 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 TBATAQ96M53 351 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 DEPDC7Q96QD5 511 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 COQ7Q99807 217 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 HEPHQ9BQS7 1158 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 EIF2AQ9BY44 585 aaKnown RBP12.41□□□□□ -0.42
UBE3B-204ENST00000449510 GBA2Q9HCG7 927 aaPredicted RBP12.41□□□□□ -0.42
UBE3B-204ENST00000449510 YJEFN3A6XGL0 299 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 G3V2T6 193 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 MDM4O15151 490 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 XPNPEP2O43895 674 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 LRIG2O94898 1065 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 FPGSQ05932 587 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 PTRHD1Q6GMV3 140 aaKnown RBP12.41□□□□□ -0.42
UBE3B-204ENST00000449510 TRNP1Q6NT89 227 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 PKN3Q6P5Z2 889 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 NOTUMQ6P988 496 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 ZC3HC1Q86WB0 502 aaKnown RBP12.41□□□□□ -0.42
UBE3B-204ENST00000449510 B3GALNT2Q8NCR0 500 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 DNAJB3Q8WWF6 145 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 ZFP42Q96MM3 310 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 SPATC1LQ9H0A9 340 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 PIGVQ9NUD9 493 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 IMPAD1Q9NX62 359 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 GIN1Q9NXP7 522 aa12.41□□□□□ -0.42
UBE3B-204ENST00000449510 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.4□□□□□ -0.42
UBE3B-204ENST00000449510 DIRAS1O95057 198 aa12.4□□□□□ -0.42
UBE3B-204ENST00000449510 IL4RP24394 825 aa12.4□□□□□ -0.42
UBE3B-204ENST00000449510 PRDX6P30041 224 aa12.4□□□□□ -0.42
UBE3B-204ENST00000449510 CAPGP40121 348 aa12.4□□□□□ -0.42
UBE3B-204ENST00000449510 DGKQP52824 942 aa12.4□□□□□ -0.42
UBE3B-204ENST00000449510 TNK2Q07912 1038 aa12.4□□□□□ -0.42
UBE3B-204ENST00000449510 EFEMP1Q12805 493 aa12.4□□□□□ -0.42
UBE3B-204ENST00000449510 MAPRE1Q15691 268 aaKnown RBP12.4□□□□□ -0.42
UBE3B-204ENST00000449510 SLC25A52Q3SY17 297 aa12.4□□□□□ -0.42
UBE3B-204ENST00000449510 PDCD4Q53EL6 469 aaKnown RBP12.4□□□□□ -0.42
UBE3B-204ENST00000449510 DEPDC1Q5TB30 811 aa12.4□□□□□ -0.42
UBE3B-204ENST00000449510 TMEM236Q5W0B7 351 aa12.4□□□□□ -0.42
UBE3B-204ENST00000449510 ANKRD46Q86W74 232 aa12.4□□□□□ -0.42
UBE3B-204ENST00000449510 CEP97Q8IW35 865 aa12.4□□□□□ -0.42
UBE3B-204ENST00000449510 EID3Q8N140 333 aa12.4□□□□□ -0.42
UBE3B-204ENST00000449510 TSEN34Q9BSV6 310 aaKnown RBP12.4□□□□□ -0.42
UBE3B-204ENST00000449510 ZNF696Q9H7X3 374 aa12.4□□□□□ -0.42
UBE3B-204ENST00000449510 MAP3K20Q9NYL2 800 aaKnown RBP12.4□□□□□ -0.42
UBE3B-204ENST00000449510 TRMT6Q9UJA5 497 aaKnown RBP12.4□□□□□ -0.42
UBE3B-204ENST00000449510 CACNA1SQ13698 1873 aa12.4□□□□□ -0.42
UBE3B-204ENST00000449510 LAMB4A4D0S4 1761 aa12.4□□□□□ -0.42
UBE3B-204ENST00000449510 ARPC2O15144 300 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms