RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 CLOCKO15516 846 aa8.15□□□□□ -1.11
LINC00954-202ENST00000449086 B4GALT3O60512 393 aa8.15□□□□□ -1.11
LINC00954-202ENST00000449086 CNOT3O75175 753 aaKnown RBP8.15□□□□□ -1.11
LINC00954-202ENST00000449086 GPC4O75487 556 aa8.15□□□□□ -1.11
LINC00954-202ENST00000449086 MICAL2O94851 1124 aa8.15□□□□□ -1.11
LINC00954-202ENST00000449086 BMP10O95393 424 aa8.15□□□□□ -1.11
LINC00954-202ENST00000449086 ESRRBO95718 433 aa8.15□□□□□ -1.11
LINC00954-202ENST00000449086 MT-ND1P03886 318 aa8.15□□□□□ -1.11
LINC00954-202ENST00000449086 TYMPP19971 482 aa8.15□□□□□ -1.11
LINC00954-202ENST00000449086 IL4RP24394 825 aa8.15□□□□□ -1.11
LINC00954-202ENST00000449086 SDC4P31431 198 aa8.15□□□□□ -1.11
LINC00954-202ENST00000449086 SPRP35270 261 aaPredicted RBP8.15□□□□□ -1.11
LINC00954-202ENST00000449086 CLCNKBP51801 687 aa8.15□□□□□ -1.11
LINC00954-202ENST00000449086 PRKCQQ04759 706 aa8.15□□□□□ -1.11
LINC00954-202ENST00000449086 ANO4Q32M45 955 aa8.15□□□□□ -1.11
LINC00954-202ENST00000449086 ZNF667Q5HYK9 610 aa8.15□□□□□ -1.11
LINC00954-202ENST00000449086 STXBP5Q5T5C0 1151 aa8.15□□□□□ -1.11
LINC00954-202ENST00000449086 LIMS2Q7Z4I7 341 aa8.15□□□□□ -1.11
LINC00954-202ENST00000449086 RAVER1Q8IY67 606 aaKnown RBP8.15□□□□□ -1.11
LINC00954-202ENST00000449086 TTC39CQ8N584 583 aa8.15□□□□□ -1.11
LINC00954-202ENST00000449086 PDZD8Q8NEN9 1154 aa8.15□□□□□ -1.11
LINC00954-202ENST00000449086 CERS2Q96G23 380 aa8.15□□□□□ -1.11
LINC00954-202ENST00000449086 TMEM169Q96HH4 297 aa8.15□□□□□ -1.11
LINC00954-202ENST00000449086 SUSD3Q96L08 255 aa8.15□□□□□ -1.11
LINC00954-202ENST00000449086 SLX1AQ9BQ83 275 aa8.15□□□□□ -1.11
LINC00954-202ENST00000449086 ADI1Q9BV57 179 aa8.15□□□□□ -1.11
LINC00954-202ENST00000449086 DRC3Q9H069 523 aa8.15□□□□□ -1.11
LINC00954-202ENST00000449086 XYLT2Q9H1B5 865 aa8.15□□□□□ -1.11
LINC00954-202ENST00000449086 PCDHGC3Q9UN70 934 aa8.15□□□□□ -1.11
LINC00954-202ENST00000449086 TMED5Q9Y3A6 229 aa8.15□□□□□ -1.11
LINC00954-202ENST00000449086 RAP2CQ9Y3L5 183 aa8.15□□□□□ -1.11
LINC00954-202ENST00000449086 TCAF2A6NFQ2 919 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 CASTOR2A6NHX0 329 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 G3V2L1 256 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 TOR1BO14657 336 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 PAPSS1O43252 624 aaPredicted RBP8.14□□□□□ -1.11
LINC00954-202ENST00000449086 B4GAT1O43505 415 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 TADA2AO75478 443 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 ITGB3P05106 788 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 CYP11A1P05108 521 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 HNRNPLP14866 589 aaKnown RBP eCLIP8.14□□□□□ -1.11
LINC00954-202ENST00000449086 CCNA2P20248 432 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 CA8P35219 290 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 CTNNB1P35222 781 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 RCVRNP35243 200 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 PBX2P40425 430 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 CLCN2P51788 898 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 PDK2Q15119 407 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 THOC7Q6I9Y2 204 aaKnown RBP8.14□□□□□ -1.11
LINC00954-202ENST00000449086 TRNP1Q6NT89 227 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 NIPAL1Q6NVV3 410 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 CD300LGQ6UXG3 332 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 DHFR2Q86XF0 187 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 SCUBE3Q8IX30 993 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 TOP6BLQ8N6T0 577 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 SLC4A11Q8NBS3 891 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 ACVR1CQ8NER5 493 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 FBXO22Q8NEZ5 403 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 RPL10LQ96L21 214 aaKnown RBP8.14□□□□□ -1.11
LINC00954-202ENST00000449086 NPLQ9BXD5 320 aaPredicted RBP8.14□□□□□ -1.11
LINC00954-202ENST00000449086 ANKRD60Q9BZ19 345 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 PCDH12Q9NPG4 1184 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 ATAD3AQ9NVI7 634 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 PCDHB8Q9UN66 801 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 TMA7Q9Y2S6 64 aaKnown RBP8.14□□□□□ -1.11
LINC00954-202ENST00000449086 ATP6AP2A0A1C7CYW4 349 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 BCLAF3A2AJT9 711 aaKnown RBP8.14□□□□□ -1.11
LINC00954-202ENST00000449086 KRBA1A5PL33 1030 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 ATP6AP2O75787 350 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 FGF18O76093 207 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 B3GAT3O94766 335 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 SOD2P04179 222 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 PGAM1P18669 254 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 TGM2P21980 687 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 SLC7A2P52569 658 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 LILRA4P59901 499 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 NIPAL4Q0D2K0 466 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 SPIDRQ14159 915 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 MAPK11Q15759 364 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 INSCQ1MX18 579 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 PGS1Q32NB8 556 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 NHSL2Q5HYW2 709 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 FAM219BQ5XKK7 198 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 ANKRD26P1Q6NSI1 321 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 HMBOX1Q6NT76 420 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 FUT10Q6P4F1 479 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 FAM183BPQ6ZVS7 135 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 TMEM86AQ8N2M4 240 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 SCAIQ8N9R8 606 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 APPL2Q8NEU8 664 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 OR9I1Q8NGQ6 314 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 MAGEE2Q8TD90 523 aaPredicted RBP8.14□□□□□ -1.11
LINC00954-202ENST00000449086 TRPC4APQ8TEL6 797 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 SLCO4A1Q96BD0 722 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 MRPL46Q9H2W6 279 aaKnown RBP8.14□□□□□ -1.11
LINC00954-202ENST00000449086 DUS2Q9NX74 493 aaKnown RBP8.14□□□□□ -1.11
LINC00954-202ENST00000449086 TRIP11Q15643 1979 aa8.14□□□□□ -1.11
LINC00954-202ENST00000449086 C9JVG2 144 aa8.13□□□□□ -1.11
LINC00954-202ENST00000449086 KCNK1O00180 336 aa8.13□□□□□ -1.11
LINC00954-202ENST00000449086 ODC1P11926 461 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms