RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 PELI3Q8N2H9 469 aa11.93□□□□□ -0.5
RFC4-208ENST00000447345 SLC25A41Q8N5S1 370 aa11.93□□□□□ -0.5
RFC4-208ENST00000447345 FAM71DQ8N9W8 422 aa11.93□□□□□ -0.5
RFC4-208ENST00000447345 DTD2Q96FN9 168 aa11.93□□□□□ -0.5
RFC4-208ENST00000447345 COQ10AQ96MF6 247 aa11.93□□□□□ -0.5
RFC4-208ENST00000447345 SPATA13Q96N96 652 aa11.93□□□□□ -0.5
RFC4-208ENST00000447345 FCRL5Q96RD9 977 aa11.93□□□□□ -0.5
RFC4-208ENST00000447345 TRIB3Q96RU7 358 aa11.93□□□□□ -0.5
RFC4-208ENST00000447345 GORASP1Q9BQQ3 440 aa11.93□□□□□ -0.5
RFC4-208ENST00000447345 TMEM121Q9BTD3 319 aa11.93□□□□□ -0.5
RFC4-208ENST00000447345 MLPHQ9BV36 600 aaPredicted RBP11.93□□□□□ -0.5
RFC4-208ENST00000447345 DNAJC28Q9NX36 388 aa11.93□□□□□ -0.5
RFC4-208ENST00000447345 FAM153AQ9UHL3 310 aa11.93□□□□□ -0.5
RFC4-208ENST00000447345 TRHDEQ9UKU6 1024 aa11.93□□□□□ -0.5
RFC4-208ENST00000447345 OR1A2Q9Y585 309 aa11.93□□□□□ -0.5
RFC4-208ENST00000447345 HS3ST3A1Q9Y663 406 aa11.93□□□□□ -0.5
RFC4-208ENST00000447345 PLXNB3Q9ULL4 1909 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 PCNX2A6NKB5 2137 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 CFAP69A5D8W1 941 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 ANKRD66B4E2M5 251 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 K7ESM1 405 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 GIPC1O14908 333 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 SCAMP1O15126 338 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 LIASO43766 372 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 SH3BP5O60239 455 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 CLDN7O95471 211 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 NDST3O95803 873 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 ATP1A1P05023 1023 aaKnown RBP11.92□□□□□ -0.5
RFC4-208ENST00000447345 EPHA8P29322 1005 aaPredicted RBP11.92□□□□□ -0.5
RFC4-208ENST00000447345 TNNT3P45378 269 aaPredicted RBP11.92□□□□□ -0.5
RFC4-208ENST00000447345 NOVA1P51513 510 aaKnown RBP11.92□□□□□ -0.5
RFC4-208ENST00000447345 PFN3P60673 137 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 RPL26P61254 145 aaKnown RBP11.92□□□□□ -0.5
RFC4-208ENST00000447345 BNIP3Q12983 259 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 OLIG2Q13516 323 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 FZD2Q14332 565 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 INPP5AQ14642 412 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 TCEA2Q15560 299 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 SLC14A2Q15849 920 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 FAXCQ5TGI0 409 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 PSAPL1Q6NUJ1 521 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 KDELC1Q6UW63 502 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 ARHGEF18Q6ZSZ5 1173 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 NYAP1Q6ZVC0 841 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 LYSMD3Q7Z3D4 306 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 DGLUCYQ7Z3D6 616 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 PARGQ86W56 976 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 OXR1Q8N573 874 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 SLC35B2Q8TB61 432 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 TADA1Q96BN2 335 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 MRGPRX2Q96LB1 330 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 APOL2Q9BQE5 337 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 FICDQ9BVA6 458 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 FSD1LQ9BXM9 530 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 USP29Q9HBJ7 922 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 GPR27Q9NS67 375 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 RPL26L1Q9UNX3 145 aaKnown RBP11.92□□□□□ -0.5
RFC4-208ENST00000447345 SHOC2Q9UQ13 582 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 BTBD3Q9Y2F9 522 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 PPIL1Q9Y3C6 166 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 ZNF711Q9Y462 761 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 JRKLQ9Y4A0 524 aa11.92□□□□□ -0.5
RFC4-208ENST00000447345 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.92□□□□□ -0.5
RFC4-208ENST00000447345 ARID1BQ8NFD5 2236 aaPredicted RBP11.92□□□□□ -0.5
RFC4-208ENST00000447345 COL5A1P20908 1838 aaPredicted RBP11.91□□□□□ -0.5
RFC4-208ENST00000447345 PSMD11O00231 422 aa11.91□□□□□ -0.5
RFC4-208ENST00000447345 TM4SF5O14894 197 aa11.91□□□□□ -0.5
RFC4-208ENST00000447345 DFNA5O60443 496 aa11.91□□□□□ -0.5
RFC4-208ENST00000447345 ITGAVP06756 1048 aa11.91□□□□□ -0.5
RFC4-208ENST00000447345 ATXN1LP0C7T5 689 aaKnown RBP11.91□□□□□ -0.5
RFC4-208ENST00000447345 ZNF883P0CG24 379 aa11.91□□□□□ -0.5
RFC4-208ENST00000447345 ZNF30P17039 623 aa11.91□□□□□ -0.5
RFC4-208ENST00000447345 STC1P52823 247 aa11.91□□□□□ -0.5
RFC4-208ENST00000447345 GEMP55040 296 aa11.91□□□□□ -0.5
RFC4-208ENST00000447345 MPP3Q13368 585 aa11.91□□□□□ -0.5
RFC4-208ENST00000447345 MTM1Q13496 603 aa11.91□□□□□ -0.5
RFC4-208ENST00000447345 PRPSAP1Q14558 356 aa11.91□□□□□ -0.5
RFC4-208ENST00000447345 AGERQ15109 404 aa11.91□□□□□ -0.5
RFC4-208ENST00000447345 KCTD19Q17RG1 926 aaPredicted RBP11.91□□□□□ -0.5
RFC4-208ENST00000447345 LONRF2Q1L5Z9 754 aa11.91□□□□□ -0.5
RFC4-208ENST00000447345 PPM1JQ5JR12 505 aa11.91□□□□□ -0.5
RFC4-208ENST00000447345 SIRPB2Q5JXA9 342 aa11.91□□□□□ -0.5
RFC4-208ENST00000447345 RAET1GQ6H3X3 334 aa11.91□□□□□ -0.5
RFC4-208ENST00000447345 CCDC70Q6NSX1 233 aa11.91□□□□□ -0.5
RFC4-208ENST00000447345 ESRP1Q6NXG1 681 aaKnown RBP11.91□□□□□ -0.5
RFC4-208ENST00000447345 PRUNE1Q86TP1 453 aa11.91□□□□□ -0.5
RFC4-208ENST00000447345 RBFAQ8N0V3 343 aa11.91□□□□□ -0.5
RFC4-208ENST00000447345 FAM174AQ8TBP5 190 aa11.91□□□□□ -0.5
RFC4-208ENST00000447345 UBE2Q2Q8WVN8 375 aa11.91□□□□□ -0.5
RFC4-208ENST00000447345 MS4A14Q96JA4 679 aa11.91□□□□□ -0.5
RFC4-208ENST00000447345 APOOQ9BUR5 198 aa11.91□□□□□ -0.5
RFC4-208ENST00000447345 ERVMER34-1Q9H9K5 563 aa11.91□□□□□ -0.5
RFC4-208ENST00000447345 SMARCAL1Q9NZC9 954 aa11.91□□□□□ -0.5
RFC4-208ENST00000447345 ZNF148Q9UQR1 794 aa11.91□□□□□ -0.5
RFC4-208ENST00000447345 SPO11Q9Y5K1 396 aa11.91□□□□□ -0.5
RFC4-208ENST00000447345 GOLGA4Q13439 2230 aaKnown RBP11.9□□□□□ -0.5
RFC4-208ENST00000447345 CACNA1AO00555 2505 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 SPTY2D1-AS1A0A0U1RR47 76 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 SPAARA0A1B0GVQ0 90 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 FFAR2O15552 330 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms