RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 METAP1P53582 386 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 IRX6P78412 446 aaPredicted RBP5.09□□□□□ -1.59
SDCBP-205ENST00000447267 TSPY1Q01534 308 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 FOLH1Q04609 750 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 FZD2Q14332 565 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 CST6Q15828 149 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 ZBTB6Q15916 424 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 FAM209AQ5JX71 171 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 PAPD7Q5XG87 772 aaKnown RBP5.09□□□□□ -1.59
SDCBP-205ENST00000447267 ANKS6Q68DC2 871 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 PPP4R3AQ6IN85 833 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 PLEKHA7Q6IQ23 1121 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 CRIP3Q6Q6R5 217 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 Q6ZSR6 202 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 DENND5BQ6ZUT9 1274 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 HTR3DQ70Z44 454 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 ANKS1BQ7Z6G8 1248 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 SFR1Q86XK3 245 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 APLFQ8IW19 511 aaPredicted RBP5.09□□□□□ -1.59
SDCBP-205ENST00000447267 ZC3H3Q8IXZ2 948 aaKnown RBP5.09□□□□□ -1.59
SDCBP-205ENST00000447267 RBFAQ8N0V3 343 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 GOLGA1Q92805 767 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 INPP5DQ92835 1189 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 BARD1Q99728 777 aaKnown RBP5.09□□□□□ -1.59
SDCBP-205ENST00000447267 ZNF747Q9BV97 191 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 SPATA9Q9BWV2 254 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 RDH14Q9HBH5 336 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 BARX1Q9HBU1 254 aaPredicted RBP5.09□□□□□ -1.59
SDCBP-205ENST00000447267 OCIAD1Q9NX40 245 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 TRPS1Q9UHF7 1281 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 AJAP1Q9UKB5 411 aaPredicted RBP5.09□□□□□ -1.59
SDCBP-205ENST00000447267 CBLCQ9ULV8 474 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 PLA2G4CQ9UP65 541 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 TNFSF13BQ9Y275 285 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 R3HCC1Q9Y3T6 440 aaKnown RBP5.09□□□□□ -1.59
SDCBP-205ENST00000447267 PCDHGA9Q9Y5G4 932 aaKnown RBP5.09□□□□□ -1.59
SDCBP-205ENST00000447267 PCDHGA3Q9Y5H0 932 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 PRRC2CQ9Y520 2896 aaKnown RBP5.08□□□□□ -1.6
SDCBP-205ENST00000447267 FAM171A2A8MVW0 826 aa5.08□□□□□ -1.6
SDCBP-205ENST00000447267 YY2O15391 372 aa5.08□□□□□ -1.6
SDCBP-205ENST00000447267 DKC1O60832 514 aaKnown RBP eCLIP5.08□□□□□ -1.6
SDCBP-205ENST00000447267 TBX18O95935 607 aa5.08□□□□□ -1.6
SDCBP-205ENST00000447267 CSF2P04141 144 aa5.08□□□□□ -1.6
SDCBP-205ENST00000447267 CXCL8P10145 99 aa5.08□□□□□ -1.6
SDCBP-205ENST00000447267 BDNFP23560 247 aa5.08□□□□□ -1.6
SDCBP-205ENST00000447267 DLSTP36957 453 aa5.08□□□□□ -1.6
SDCBP-205ENST00000447267 STAT1P42224 750 aa5.08□□□□□ -1.6
SDCBP-205ENST00000447267 PSMD8P48556 350 aa5.08□□□□□ -1.6
SDCBP-205ENST00000447267 KCNK10P57789 538 aa5.08□□□□□ -1.6
SDCBP-205ENST00000447267 ANTXR2P58335 489 aa5.08□□□□□ -1.6
SDCBP-205ENST00000447267 SRSF2Q01130 221 aaKnown RBP5.08□□□□□ -1.6
SDCBP-205ENST00000447267 ABHD18Q0P651 414 aa5.08□□□□□ -1.6
SDCBP-205ENST00000447267 DBPQ10586 325 aaPredicted RBP5.08□□□□□ -1.6
SDCBP-205ENST00000447267 RAPSNQ13702 412 aa5.08□□□□□ -1.6
SDCBP-205ENST00000447267 NFE2Q16621 373 aaPredicted RBP5.08□□□□□ -1.6
SDCBP-205ENST00000447267 IMMTQ16891 758 aaKnown RBP5.08□□□□□ -1.6
SDCBP-205ENST00000447267 SPDYAQ5MJ70 313 aa5.08□□□□□ -1.6
SDCBP-205ENST00000447267 TPRG1LQ5T0D9 272 aa5.08□□□□□ -1.6
SDCBP-205ENST00000447267 ESRP1Q6NXG1 681 aaKnown RBP5.08□□□□□ -1.6
SDCBP-205ENST00000447267 PODNL1Q6PEZ8 512 aa5.08□□□□□ -1.6
SDCBP-205ENST00000447267 RALYLQ86SE5 291 aaKnown RBP5.08□□□□□ -1.6
SDCBP-205ENST00000447267 CATSPER3Q86XQ3 398 aa5.08□□□□□ -1.6
SDCBP-205ENST00000447267 SPATA2LQ8IUW3 424 aaPredicted RBP5.08□□□□□ -1.6
SDCBP-205ENST00000447267 PPM1NQ8N819 430 aa5.08□□□□□ -1.6
SDCBP-205ENST00000447267 PCDH19Q8TAB3 1148 aa5.08□□□□□ -1.6
SDCBP-205ENST00000447267 DEPTORQ8TB45 409 aa5.08□□□□□ -1.6
SDCBP-205ENST00000447267 EVI5LQ96CN4 794 aa5.08□□□□□ -1.6
SDCBP-205ENST00000447267 EXOC2Q96KP1 924 aa5.08□□□□□ -1.6
SDCBP-205ENST00000447267 PKMYT1Q99640 499 aa5.08□□□□□ -1.6
SDCBP-205ENST00000447267 ACO2Q99798 780 aaKnown RBP5.08□□□□□ -1.6
SDCBP-205ENST00000447267 NUDT9Q9BW91 350 aa5.08□□□□□ -1.6
SDCBP-205ENST00000447267 CLPBQ9H078 707 aa5.08□□□□□ -1.6
SDCBP-205ENST00000447267 C2orf40Q9H1Z8 148 aa5.08□□□□□ -1.6
SDCBP-205ENST00000447267 C6orf50Q9HD87 102 aa5.08□□□□□ -1.6
SDCBP-205ENST00000447267 ACSS2Q9NR19 701 aa5.08□□□□□ -1.6
SDCBP-205ENST00000447267 FGF21Q9NSA1 209 aa5.08□□□□□ -1.6
SDCBP-205ENST00000447267 PFDN2Q9UHV9 154 aa5.08□□□□□ -1.6
SDCBP-205ENST00000447267 SH3BGRL2Q9UJC5 107 aa5.08□□□□□ -1.6
SDCBP-205ENST00000447267 DMTF1Q9Y222 760 aa5.08□□□□□ -1.6
SDCBP-205ENST00000447267 RPS6KL1Q9Y6S9 549 aa5.08□□□□□ -1.6
SDCBP-205ENST00000447267 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.08□□□□□ -1.6
SDCBP-205ENST00000447267 TLCD2A6NGC4 264 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 LACTBL1A8MY62 500 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 FAM47E-STBD1D6RA91 191 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 CCL21O00585 134 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 TPP1O14773 563 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 INPP4BO15327 924 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 TIMM44O43615 452 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 SLITRK3O94933 977 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 ANXA6P08133 673 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 ENO2P09104 434 aaPredicted RBP5.07□□□□□ -1.6
SDCBP-205ENST00000447267 FAM153BP0C7A2 387 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 PTPN1P18031 435 aaKnown RBP5.07□□□□□ -1.6
SDCBP-205ENST00000447267 TACR2P21452 398 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 RECQLP46063 649 aaPredicted RBP5.07□□□□□ -1.6
SDCBP-205ENST00000447267 PGFP49763 221 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 DGKQP52824 942 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 NLRP5P59047 1200 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 CHRNA6Q15825 494 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 AMZ1Q400G9 498 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms