RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 DUS1LQ6P1R4 473 aaKnown RBP3.31□□□□□ -1.88
PMS1-215ENST00000447232 CCDC186Q7Z3E2 898 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 MRGPRGQ86SM5 289 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 KCNMB4Q86W47 210 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 SFR1Q86XK3 245 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 CREG2Q8IUH2 290 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 SFTPA2Q8IWL1 248 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 LRRC56Q8IYG6 542 aaPredicted RBP3.31□□□□□ -1.88
PMS1-215ENST00000447232 ZSWIM2Q8NEG5 633 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 OR4D9Q8NGE8 314 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 CHTF18Q8WVB6 975 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 THAP4Q8WY91 577 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 OR8D1Q8WZ84 308 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 INPP5DQ92835 1189 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 RPL10LQ96L21 214 aaKnown RBP3.31□□□□□ -1.88
PMS1-215ENST00000447232 SMAD5Q99717 465 aaKnown RBP3.31□□□□□ -1.88
PMS1-215ENST00000447232 NUDT9Q9BW91 350 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 EDEM3Q9BZQ6 932 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 TWSG1Q9GZX9 223 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 SP110Q9HB58 689 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 MARCH2Q9P0N8 246 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 PDP2Q9P2J9 529 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 LRIT1Q9P2V4 623 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 TNFRSF10DQ9UBN6 386 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 USP25Q9UHP3 1055 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 B3GNT3Q9Y2A9 372 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 COPG1Q9Y678 874 aaKnown RBP3.31□□□□□ -1.88
PMS1-215ENST00000447232 NCOA6Q14686 2063 aaPredicted RBP3.31□□□□□ -1.88
PMS1-215ENST00000447232 MDC1Q14676 2089 aaKnown RBP3.3□□□□□ -1.88
PMS1-215ENST00000447232 KRTAP9-7A8MTY7 169 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 A8MXQ7 604 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 CCER2I3L3R5 266 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 M0QYT0 321 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 FPGTO14772 594 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 KCNAB3O43448 404 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 HPXP02790 462 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 RALAP11233 206 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 RAC2P15153 192 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 CD1CP29017 333 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 ST13P50502 369 aaKnown RBP3.3□□□□□ -1.88
PMS1-215ENST00000447232 CCL11P51671 97 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 KIF11P52732 1056 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 ZNF131P52739 623 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 HK3P52790 923 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 MAP3K7CLP57077 242 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 ADAM8P78325 824 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 FSCBQ5H9T9 825 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 FAXCQ5TGI0 409 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 KIAA1161Q6NSJ0 714 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 CLEC9AQ6UXN8 241 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 CEACAM20Q6UY09 585 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 MACC1Q6ZN28 852 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 MMS22LQ6ZRQ5 1243 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 MFN1Q8IWA4 741 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 NRSN1Q8IZ57 195 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 DENND6BQ8NEG7 585 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 FDCSPQ8NFU4 85 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 OR5B17Q8NGF7 314 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 FEM1CQ96JP0 617 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 C18orf12Q96KH6 178 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 CTRCQ99895 268 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 ENKD1Q9H0I2 346 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 ING2Q9H160 280 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 IKZF4Q9H2S9 585 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 PNPLA8Q9NP80 782 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 FBXO8Q9NRD0 319 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 INTS13Q9NVM9 706 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 KCND2Q9NZV8 630 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 PIPSLA2A3N6 862 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 RNF212BA8MTL3 300 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 K7ENM7 598 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 RNF103O00237 685 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 TBL1XO60907 577 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 CTSLP07711 333 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 TMEM191BP0C7N4 346 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 CSF2RBP32927 897 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 MAN1A1P33908 653 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 MCM7P33993 719 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 KRT2P35908 639 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 STAT1P42224 750 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 BLKP51451 505 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 OR1D5P58170 312 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 YPEL5P62699 121 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 RPS21P63220 83 aaKnown RBP3.3□□□□□ -1.88
PMS1-215ENST00000447232 PPARDQ03181 441 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 LAMB3Q13751 1172 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 ARHGEF7Q14155 803 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 KRT32Q14532 448 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 UGT8Q16880 541 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 FAM133BQ5BKY9 247 aaKnown RBP3.3□□□□□ -1.88
PMS1-215ENST00000447232 ARSHQ5FYA8 562 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 TMEM201Q5SNT2 666 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 CLEC20AQ6ZU45 233 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 C17orf82Q86X59 251 aaPredicted RBP3.3□□□□□ -1.88
PMS1-215ENST00000447232 GKN2Q86XP6 184 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 FAM129CQ86XR2 697 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 CEP97Q8IW35 865 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 IGSF22Q8N9C0 903 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 ASB12Q8WXK4 309 aa3.3□□□□□ -1.88
PMS1-215ENST00000447232 PRICKLE1Q96MT3 831 aaPredicted RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms