RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 HIST1H2AJQ99878 128 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 H2AFJQ9BTM1 129 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 TCRBV7S3A2A0A539 114 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 CST1P01037 141 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 FTH1P02794 183 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 FUCA1P04066 466 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 BMP2P12643 396 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 PLEKHG4Q58EX7 1191 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 LRRC58Q96CX6 371 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 C1GALT1C1Q96EU7 318 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 GMCL1Q96IK5 515 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 KCNK13Q9HB14 408 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 ITM2CQ9NQX7 267 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 TMEM216Q9P0N5 145 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 UBXN8O00124 270 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 CYP7B1O75881 506 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 GLP2RO95838 553 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 GDF10P55107 478 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 CYP2A13Q16696 494 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 CD101Q93033 1021 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 VPS35Q96QK1 796 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 ANKRA2Q9H9E1 313 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 UBAP1LF5GYI3 381 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 NPHS1O60500 1241 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 COL6A2P12110 1019 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 CHRM3P20309 590 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 BAATQ14032 418 aaPredicted RBP7.88□□□□□ -1.15
SMG1-202ENST00000446231 MILR1Q7Z6M3 343 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 DCP2Q8IU60 420 aaKnown RBP7.88□□□□□ -1.15
SMG1-202ENST00000446231 SCUBE3Q8IX30 993 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 NID2Q14112 1375 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 SERPINA1P01009 418 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 CPSF7Q8N684 471 aaKnown RBP7.88□□□□□ -1.15
SMG1-202ENST00000446231 TBC1D30Q9Y2I9 924 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 NCK1P16333 377 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 LRRC15Q8TF66 581 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 SPTAN1Q13813 2472 aaKnown RBP7.88□□□□□ -1.15
SMG1-202ENST00000446231 TMEM221A6NGB7 291 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 IFRD1O00458 451 aaPredicted RBP7.88□□□□□ -1.15
SMG1-202ENST00000446231 NDST1P52848 882 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 LRRC71Q8N4P6 559 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 TTYH2Q9BSA4 534 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 AASDHPPTQ9NRN7 309 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 HEMK1Q9Y5R4 338 aaPredicted RBP7.88□□□□□ -1.15
SMG1-202ENST00000446231 POLR2JP52435 117 aaKnown RBP7.88□□□□□ -1.15
SMG1-202ENST00000446231 EEFSECP57772 596 aaKnown RBP7.88□□□□□ -1.15
SMG1-202ENST00000446231 KCNJ8Q15842 424 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 CRY1Q16526 586 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 SLC44A2Q8IWA5 706 aaPredicted RBP7.88□□□□□ -1.15
SMG1-202ENST00000446231 DENND6AQ8IWF6 608 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 NAT8LQ8N9F0 302 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 ACER1Q8TDN7 264 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 ZNF670Q9BS34 389 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 VWA7Q9Y334 891 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 TK2O00142 265 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 PROZP22891 400 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 CHADLQ6NUI6 762 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 RNF157Q96PX1 679 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 RPF2Q9H7B2 306 aaKnown RBP7.88□□□□□ -1.15
SMG1-202ENST00000446231 UCKL1Q9NWZ5 548 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 IFT52Q9Y366 437 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 FAM47E-STBD1D6RA91 191 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 CSDE1O75534 798 aaKnown RBP7.88□□□□□ -1.15
SMG1-202ENST00000446231 IL27RAQ6UWB1 636 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 EMC3Q9P0I2 261 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 CD163L1Q9NR16 1453 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 ADGRB1O14514 1584 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 NUP62P37198 522 aaPredicted RBP7.88□□□□□ -1.15
SMG1-202ENST00000446231 MYBPC1Q00872 1141 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 ARHGEF6Q15052 776 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 CGB2Q6NT52 195 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 THEM5Q8N1Q8 247 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 JPH3Q8WXH2 748 aaPredicted RBP7.88□□□□□ -1.15
SMG1-202ENST00000446231 TFAP2CQ92754 450 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 MTHFD1P11586 935 aaKnown RBP7.88□□□□□ -1.15
SMG1-202ENST00000446231 UNGP13051 313 aaPredicted RBP7.88□□□□□ -1.15
SMG1-202ENST00000446231 HOXB8P17481 243 aaPredicted RBP7.88□□□□□ -1.15
SMG1-202ENST00000446231 GAD2Q05329 585 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 HHIPL2Q6UWX4 724 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 CANT1Q8WVQ1 401 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 TMEM246Q9BRR3 403 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 OXCT2Q9BYC2 517 aaPredicted RBP7.88□□□□□ -1.15
SMG1-202ENST00000446231 SNTG1Q9NSN8 517 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 SETD4Q9NVD3 440 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 RBM22Q9NW64 420 aaKnown RBP eCLIP7.88□□□□□ -1.15
SMG1-202ENST00000446231 TJP2Q9UDY2 1190 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 FAM220BPB1ANY3 271 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 XYLBO75191 536 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 CLIC3O95833 236 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 MYL9P24844 172 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 DSG3P32926 999 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 MAB21L1Q13394 359 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 TIGD6Q17RP2 521 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 BTBD16Q32M84 506 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 CEP295NLQ96MC4 621 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 MMP27Q9H306 513 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 EXD2Q9NVH0 621 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 PCDH10Q9P2E7 1040 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 ALKQ9UM73 1620 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 MYCLP1P12525 358 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms