RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 GNA12Q03113 381 aa17.84■□□□□ 0.45
CLDN9-201ENST00000445369 PPP1R3AQ16821 1122 aa17.84■□□□□ 0.45
CLDN9-201ENST00000445369 TYSND1Q2T9J0 566 aa17.84■□□□□ 0.45
CLDN9-201ENST00000445369 CYHR1Q6ZMK1 362 aa17.84■□□□□ 0.45
CLDN9-201ENST00000445369 DBF4BQ8NFT6 615 aa17.84■□□□□ 0.45
CLDN9-201ENST00000445369 OR7D4Q8NG98 312 aa17.84■□□□□ 0.45
CLDN9-201ENST00000445369 TMA16Q96EY4 203 aaKnown RBP17.84■□□□□ 0.45
CLDN9-201ENST00000445369 ERVK-6Q9BXR3 956 aa17.84■□□□□ 0.45
CLDN9-201ENST00000445369 PPP1R12CQ9BZL4 782 aa17.84■□□□□ 0.45
CLDN9-201ENST00000445369 CATSPERZQ9NTU4 200 aa17.84■□□□□ 0.45
CLDN9-201ENST00000445369 BCAP29Q9UHQ4 241 aa17.84■□□□□ 0.45
CLDN9-201ENST00000445369 ACTL7AQ9Y615 435 aa17.84■□□□□ 0.45
CLDN9-201ENST00000445369 SUPT7LO94864 414 aa17.83■□□□□ 0.45
CLDN9-201ENST00000445369 PIRTP0C851 137 aa17.83■□□□□ 0.45
CLDN9-201ENST00000445369 UQCRBP14927 111 aa17.83■□□□□ 0.45
CLDN9-201ENST00000445369 STC1P52823 247 aa17.83■□□□□ 0.45
CLDN9-201ENST00000445369 ELAVL2Q12926 359 aaKnown RBP17.83■□□□□ 0.45
CLDN9-201ENST00000445369 MAPRE2Q15555 327 aa17.83■□□□□ 0.45
CLDN9-201ENST00000445369 ZFP1Q6P2D0 407 aa17.83■□□□□ 0.45
CLDN9-201ENST00000445369 TMEM173Q86WV6 379 aaPredicted RBP17.83■□□□□ 0.45
CLDN9-201ENST00000445369 OR4L1Q8NH43 312 aa17.83■□□□□ 0.45
CLDN9-201ENST00000445369 ASB3Q9Y575 518 aa17.83■□□□□ 0.45
CLDN9-201ENST00000445369 CCDC189A1A4V9 331 aa17.83■□□□□ 0.44
CLDN9-201ENST00000445369 NT5C1B-RDH14C9J2C7 533 aa17.83■□□□□ 0.44
CLDN9-201ENST00000445369 RNASEH1O60930 286 aaKnown RBP17.83■□□□□ 0.44
CLDN9-201ENST00000445369 SMIM24O75264 130 aa17.83■□□□□ 0.44
CLDN9-201ENST00000445369 BCAS2O75934 225 aaPredicted RBP17.83■□□□□ 0.44
CLDN9-201ENST00000445369 PSMD8P48556 350 aa17.83■□□□□ 0.44
CLDN9-201ENST00000445369 RPL26P61254 145 aaKnown RBP17.83■□□□□ 0.44
CLDN9-201ENST00000445369 MRPS22P82650 360 aaKnown RBP17.83■□□□□ 0.44
CLDN9-201ENST00000445369 FASTKQ14296 549 aaKnown RBP17.83■□□□□ 0.44
CLDN9-201ENST00000445369 CLEC6AQ6EIG7 209 aa17.83■□□□□ 0.44
CLDN9-201ENST00000445369 ANKS3Q6ZW76 656 aa17.83■□□□□ 0.44
CLDN9-201ENST00000445369 BBS5Q8N3I7 341 aa17.83■□□□□ 0.44
CLDN9-201ENST00000445369 NSMCE3Q96MG7 304 aa17.83■□□□□ 0.44
CLDN9-201ENST00000445369 PSKH2Q96QS6 385 aa17.83■□□□□ 0.44
CLDN9-201ENST00000445369 CDK5RAP1Q96SZ6 601 aaKnown RBP17.83■□□□□ 0.44
CLDN9-201ENST00000445369 AARSD1Q9BTE6 412 aaKnown RBP17.83■□□□□ 0.44
CLDN9-201ENST00000445369 MRPL1Q9BYD6 325 aaKnown RBP17.83■□□□□ 0.44
CLDN9-201ENST00000445369 RETREG1Q9H6L5 497 aa17.83■□□□□ 0.44
CLDN9-201ENST00000445369 TRPC7Q9HCX4 862 aa17.83■□□□□ 0.44
CLDN9-201ENST00000445369 PDP2Q9P2J9 529 aa17.83■□□□□ 0.44
CLDN9-201ENST00000445369 SEPT3Q9UH03 358 aa17.83■□□□□ 0.44
CLDN9-201ENST00000445369 DNMT3LQ9UJW3 386 aa17.83■□□□□ 0.44
CLDN9-201ENST00000445369 PCDHGA7Q9Y5G6 932 aa17.83■□□□□ 0.44
CLDN9-201ENST00000445369 ZFP37Q9Y6Q3 630 aaPredicted RBP17.83■□□□□ 0.44
CLDN9-201ENST00000445369 TET1Q8NFU7 2136 aa17.82■□□□□ 0.44
CLDN9-201ENST00000445369 H3BNC9 293 aa17.82■□□□□ 0.44
CLDN9-201ENST00000445369 ARVCFO00192 962 aa17.82■□□□□ 0.44
CLDN9-201ENST00000445369 PSMD12O00232 456 aaPredicted RBP17.82■□□□□ 0.44
CLDN9-201ENST00000445369 ACOT8O14734 319 aa17.82■□□□□ 0.44
CLDN9-201ENST00000445369 TRPA1O75762 1119 aa17.82■□□□□ 0.44
CLDN9-201ENST00000445369 GALTP07902 379 aa17.82■□□□□ 0.44
CLDN9-201ENST00000445369 MSX2P35548 267 aaPredicted RBP17.82■□□□□ 0.44
CLDN9-201ENST00000445369 ATP5C1P36542 298 aaKnown RBP17.82■□□□□ 0.44
CLDN9-201ENST00000445369 ALDH1A3P47895 512 aa17.82■□□□□ 0.44
CLDN9-201ENST00000445369 ZNF140P52738 457 aaPredicted RBP17.82■□□□□ 0.44
CLDN9-201ENST00000445369 CDH4P55283 916 aa17.82■□□□□ 0.44
CLDN9-201ENST00000445369 STX5Q13190 355 aa17.82■□□□□ 0.44
CLDN9-201ENST00000445369 FAM219BQ5XKK7 198 aa17.82■□□□□ 0.44
CLDN9-201ENST00000445369 LHX8Q68G74 356 aa17.82■□□□□ 0.44
CLDN9-201ENST00000445369 TAS1R1Q7RTX1 841 aa17.82■□□□□ 0.44
CLDN9-201ENST00000445369 RNF148Q8N7C7 305 aa17.82■□□□□ 0.44
CLDN9-201ENST00000445369 PHC3Q8NDX5 983 aa17.82■□□□□ 0.44
CLDN9-201ENST00000445369 BHLHE22Q8NFJ8 381 aaPredicted RBP17.82■□□□□ 0.44
CLDN9-201ENST00000445369 DLG3Q92796 817 aa17.82■□□□□ 0.44
CLDN9-201ENST00000445369 TUBGCP5Q96RT8 1024 aa17.82■□□□□ 0.44
CLDN9-201ENST00000445369 NLE1Q9NVX2 485 aaPredicted RBP17.82■□□□□ 0.44
CLDN9-201ENST00000445369 SARDHQ9UL12 918 aa17.82■□□□□ 0.44
CLDN9-201ENST00000445369 TRIM38O00635 465 aa17.81■□□□□ 0.44
CLDN9-201ENST00000445369 MAP3K13O43283 966 aa17.81■□□□□ 0.44
CLDN9-201ENST00000445369 TSPAN8P19075 237 aa17.81■□□□□ 0.44
CLDN9-201ENST00000445369 RGRP47804 291 aa17.81■□□□□ 0.44
CLDN9-201ENST00000445369 NOGQ13253 232 aa17.81■□□□□ 0.44
CLDN9-201ENST00000445369 LRP8Q14114 963 aa17.81■□□□□ 0.44
CLDN9-201ENST00000445369 OR4D1Q15615 310 aa17.81■□□□□ 0.44
CLDN9-201ENST00000445369 REP15Q6BDI9 236 aa17.81■□□□□ 0.44
CLDN9-201ENST00000445369 IL31Q6EBC2 164 aa17.81■□□□□ 0.44
CLDN9-201ENST00000445369 PRSS55Q6UWB4 352 aaPredicted RBP17.81■□□□□ 0.44
CLDN9-201ENST00000445369 LARP4Q71RC2 724 aaKnown RBP eCLIP17.81■□□□□ 0.44
CLDN9-201ENST00000445369 TMEM126BQ8IUX1 230 aa17.81■□□□□ 0.44
CLDN9-201ENST00000445369 RHEBL1Q8TAI7 183 aa17.81■□□□□ 0.44
CLDN9-201ENST00000445369 BCL7CQ8WUZ0 217 aaPredicted RBP17.81■□□□□ 0.44
CLDN9-201ENST00000445369 CDKN2AIPNLQ96HQ2 116 aa17.81■□□□□ 0.44
CLDN9-201ENST00000445369 PRICKLE1Q96MT3 831 aaPredicted RBP17.81■□□□□ 0.44
CLDN9-201ENST00000445369 TTPALQ9BTX7 342 aa17.81■□□□□ 0.44
CLDN9-201ENST00000445369 INTS10Q9NVR2 710 aaKnown RBP17.81■□□□□ 0.44
CLDN9-201ENST00000445369 CACNA2D2Q9NY47 1150 aa17.81■□□□□ 0.44
CLDN9-201ENST00000445369 UBA2Q9UBT2 640 aaPredicted RBP17.81■□□□□ 0.44
CLDN9-201ENST00000445369 RIMS3Q9UJD0 308 aa17.81■□□□□ 0.44
CLDN9-201ENST00000445369 SPO11Q9Y5K1 396 aa17.81■□□□□ 0.44
CLDN9-201ENST00000445369 H3BMM5 538 aa17.81■□□□□ 0.44
CLDN9-201ENST00000445369 FBP2O00757 339 aa17.81■□□□□ 0.44
CLDN9-201ENST00000445369 PRSS56P0CW18 603 aa17.81■□□□□ 0.44
CLDN9-201ENST00000445369 MTHFD2P13995 350 aa17.81■□□□□ 0.44
CLDN9-201ENST00000445369 ATP4BP51164 291 aa17.81■□□□□ 0.44
CLDN9-201ENST00000445369 PSME3P61289 254 aa17.81■□□□□ 0.44
CLDN9-201ENST00000445369 ADGRE1Q14246 886 aa17.81■□□□□ 0.44
CLDN9-201ENST00000445369 GRAMD1BQ3KR37 738 aa17.81■□□□□ 0.44
CLDN9-201ENST00000445369 UGT3A2Q3SY77 523 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms