RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 LZTS3O60299 673 aaPredicted RBP16.04■□□□□ 0.16
USP39-205ENST00000442708 GDF9O60383 454 aa16.04■□□□□ 0.16
USP39-205ENST00000442708 PHF2O75151 1096 aa16.04■□□□□ 0.16
USP39-205ENST00000442708 AKT2P31751 481 aa16.04■□□□□ 0.16
USP39-205ENST00000442708 ETV3P41162 512 aa16.04■□□□□ 0.16
USP39-205ENST00000442708 STC1P52823 247 aa16.04■□□□□ 0.16
USP39-205ENST00000442708 PRPSAP1Q14558 356 aa16.04■□□□□ 0.16
USP39-205ENST00000442708 ACOX1Q15067 660 aa16.04■□□□□ 0.16
USP39-205ENST00000442708 IRF4Q15306 451 aa16.04■□□□□ 0.16
USP39-205ENST00000442708 Q6ZVL8 140 aa16.04■□□□□ 0.16
USP39-205ENST00000442708 LYSMD3Q7Z3D4 306 aa16.04■□□□□ 0.16
USP39-205ENST00000442708 TECPR1Q7Z6L1 1165 aa16.04■□□□□ 0.16
USP39-205ENST00000442708 ABI3BPQ7Z7G0 1075 aa16.04■□□□□ 0.16
USP39-205ENST00000442708 ZSCAN30Q86W11 494 aa16.04■□□□□ 0.16
USP39-205ENST00000442708 KIAA2013Q8IYS2 634 aa16.04■□□□□ 0.16
USP39-205ENST00000442708 NDUFAF2Q8N183 169 aa16.04■□□□□ 0.16
USP39-205ENST00000442708 PDCD7Q8N8D1 485 aaKnown RBP16.04■□□□□ 0.16
USP39-205ENST00000442708 PLA2G15Q8NCC3 412 aa16.04■□□□□ 0.16
USP39-205ENST00000442708 OR13H1Q8NG92 308 aa16.04■□□□□ 0.16
USP39-205ENST00000442708 ATL2Q8NHH9 583 aa16.04■□□□□ 0.16
USP39-205ENST00000442708 CAAP1Q9H8G2 361 aa16.04■□□□□ 0.16
USP39-205ENST00000442708 ANKRD6Q9Y2G4 727 aa16.04■□□□□ 0.16
USP39-205ENST00000442708 AAR2Q9Y312 384 aaKnown RBP16.04■□□□□ 0.16
USP39-205ENST00000442708 NEU2Q9Y3R4 380 aa16.04■□□□□ 0.16
USP39-205ENST00000442708 C1orf232A0A0U1RR37 186 aa16.03■□□□□ 0.16
USP39-205ENST00000442708 PRR5-ARHGAP8B1AHC4 643 aa16.03■□□□□ 0.16
USP39-205ENST00000442708 ENGP17813 658 aa16.03■□□□□ 0.16
USP39-205ENST00000442708 GRIK2Q13002 908 aa16.03■□□□□ 0.16
USP39-205ENST00000442708 MSLNQ13421 630 aaPredicted RBP16.03■□□□□ 0.16
USP39-205ENST00000442708 STAT4Q14765 748 aa16.03■□□□□ 0.16
USP39-205ENST00000442708 TRIP13Q15645 432 aaPredicted RBP16.03■□□□□ 0.16
USP39-205ENST00000442708 KIF19Q2TAC6 998 aa16.03■□□□□ 0.16
USP39-205ENST00000442708 TPRG1LQ5T0D9 272 aa16.03■□□□□ 0.16
USP39-205ENST00000442708 CCDC137Q6PK04 289 aaKnown RBP16.03■□□□□ 0.16
USP39-205ENST00000442708 GSTA5Q7RTV2 222 aa16.03■□□□□ 0.16
USP39-205ENST00000442708 RABEPKQ7Z6M1 372 aa16.03■□□□□ 0.16
USP39-205ENST00000442708 SPATS2Q86XZ4 545 aaKnown RBP16.03■□□□□ 0.16
USP39-205ENST00000442708 CCDC89Q8N998 374 aa16.03■□□□□ 0.16
USP39-205ENST00000442708 MFSD2AQ8NA29 543 aa16.03■□□□□ 0.16
USP39-205ENST00000442708 TBL1YQ9BQ87 522 aa16.03■□□□□ 0.16
USP39-205ENST00000442708 FSD1LQ9BXM9 530 aa16.03■□□□□ 0.16
USP39-205ENST00000442708 NUSAP1Q9BXS6 441 aaKnown RBP16.03■□□□□ 0.16
USP39-205ENST00000442708 MAGEE1Q9HCI5 957 aa16.03■□□□□ 0.16
USP39-205ENST00000442708 PAK5Q9P286 719 aa16.03■□□□□ 0.16
USP39-205ENST00000442708 SHOC2Q9UQ13 582 aa16.03■□□□□ 0.16
USP39-205ENST00000442708 ZNF711Q9Y462 761 aa16.03■□□□□ 0.16
USP39-205ENST00000442708 SNX11Q9Y5W9 270 aa16.03■□□□□ 0.16
USP39-205ENST00000442708 HS3ST3A1Q9Y663 406 aa16.03■□□□□ 0.16
USP39-205ENST00000442708 BPTFQ12830 3046 aa16.03■□□□□ 0.16
USP39-205ENST00000442708 K7ESM1 405 aa16.02■□□□□ 0.16
USP39-205ENST00000442708 TLR4O00206 839 aa16.02■□□□□ 0.16
USP39-205ENST00000442708 PSMD11O00231 422 aa16.02■□□□□ 0.16
USP39-205ENST00000442708 ARHGAP33O14559 1287 aa16.02■□□□□ 0.16
USP39-205ENST00000442708 CDX4O14627 284 aaPredicted RBP16.02■□□□□ 0.16
USP39-205ENST00000442708 AP2A1O95782 977 aa16.02■□□□□ 0.16
USP39-205ENST00000442708 ZNF30P17039 623 aa16.02■□□□□ 0.16
USP39-205ENST00000442708 HLA-DPA1P20036 260 aa16.02■□□□□ 0.16
USP39-205ENST00000442708 NFKBIAP25963 317 aa16.02■□□□□ 0.16
USP39-205ENST00000442708 CTSKP43235 329 aa16.02■□□□□ 0.16
USP39-205ENST00000442708 NXPH1P58417 271 aa16.02■□□□□ 0.16
USP39-205ENST00000442708 PFN3P60673 137 aa16.02■□□□□ 0.16
USP39-205ENST00000442708 ARHGEF7Q14155 803 aa16.02■□□□□ 0.16
USP39-205ENST00000442708 LRRC14Q15048 493 aa16.02■□□□□ 0.16
USP39-205ENST00000442708 Q6ZSR6 202 aa16.02■□□□□ 0.16
USP39-205ENST00000442708 TMC3Q7Z5M5 1100 aa16.02■□□□□ 0.16
USP39-205ENST00000442708 SLC22A18ASQ8N1D0 253 aa16.02■□□□□ 0.16
USP39-205ENST00000442708 TTC30BQ8N4P2 665 aa16.02■□□□□ 0.16
USP39-205ENST00000442708 DENND6BQ8NEG7 585 aa16.02■□□□□ 0.16
USP39-205ENST00000442708 FUBP1Q96AE4 644 aaKnown RBP16.02■□□□□ 0.16
USP39-205ENST00000442708 NUS1Q96E22 293 aa16.02■□□□□ 0.16
USP39-205ENST00000442708 DTD2Q96FN9 168 aa16.02■□□□□ 0.16
USP39-205ENST00000442708 DDX47Q9H0S4 455 aaKnown RBP16.02■□□□□ 0.16
USP39-205ENST00000442708 IL21RQ9HBE5 538 aa16.02■□□□□ 0.16
USP39-205ENST00000442708 RAB6BQ9NRW1 208 aa16.02■□□□□ 0.16
USP39-205ENST00000442708 GPR27Q9NS67 375 aa16.02■□□□□ 0.16
USP39-205ENST00000442708 CD84Q9UIB8 345 aa16.02■□□□□ 0.16
USP39-205ENST00000442708 GOLGA6L10A0A0M3HER8 536 aa16.01■□□□□ 0.15
USP39-205ENST00000442708 FPGTO14772 594 aa16.01■□□□□ 0.15
USP39-205ENST00000442708 KRT14P02533 472 aa16.01■□□□□ 0.15
USP39-205ENST00000442708 SLC4A1P02730 911 aa16.01■□□□□ 0.15
USP39-205ENST00000442708 PCCBP05166 539 aa16.01■□□□□ 0.15
USP39-205ENST00000442708 FGF1P05230 155 aa16.01■□□□□ 0.15
USP39-205ENST00000442708 THEGLP0DJG4 465 aa16.01■□□□□ 0.15
USP39-205ENST00000442708 FDFT1P37268 417 aa16.01■□□□□ 0.15
USP39-205ENST00000442708 GRIA1P42261 906 aa16.01■□□□□ 0.15
USP39-205ENST00000442708 FNTAP49354 379 aa16.01■□□□□ 0.15
USP39-205ENST00000442708 SEMA5AQ13591 1074 aa16.01■□□□□ 0.15
USP39-205ENST00000442708 INPP5AQ14642 412 aa16.01■□□□□ 0.15
USP39-205ENST00000442708 TEAD4Q15561 434 aa16.01■□□□□ 0.15
USP39-205ENST00000442708 PRAMEF14Q5SWL7 426 aa16.01■□□□□ 0.15
USP39-205ENST00000442708 CCDC70Q6NSX1 233 aa16.01■□□□□ 0.15
USP39-205ENST00000442708 KYAT3Q6YP21 454 aaKnown RBP16.01■□□□□ 0.15
USP39-205ENST00000442708 IQCHQ86VS3 1027 aa16.01■□□□□ 0.15
USP39-205ENST00000442708 SCAMP4Q969E2 229 aa16.01■□□□□ 0.15
USP39-205ENST00000442708 KLHDC7BQ96G42 594 aa16.01■□□□□ 0.15
USP39-205ENST00000442708 PPP1R2P1Q96PQ5 205 aa16.01■□□□□ 0.15
USP39-205ENST00000442708 C1QTNF7Q9BXJ2 289 aa16.01■□□□□ 0.15
USP39-205ENST00000442708 ABCG8Q9H221 673 aa16.01■□□□□ 0.15
USP39-205ENST00000442708 ARNT2Q9HBZ2 717 aa16.01■□□□□ 0.15
USP39-205ENST00000442708 PIH1D1Q9NWS0 290 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms