RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 IL1R2P27930 398 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 GJC1P36383 396 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 CCL7P80098 99 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 FANCCQ00597 558 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 ITKQ08881 620 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 VAC14Q08AM6 782 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 ILF3Q12906 894 aaKnown RBP eCLIP11.79□□□□□ -0.526e-6■□□□□ 8.6
TTC28-203ENST00000442232 NR1I3Q14994 352 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 CNGA3Q16281 694 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 ZSCAN23Q3MJ62 389 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 MAP9Q49MG5 647 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 C14orf28Q4W4Y0 310 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 CCDC122Q5T0U0 273 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 SPECC1LQ69YQ0 1117 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 RAET1GQ6H3X3 334 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 CLEC14AQ86T13 490 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 LRRC49Q8IUZ0 686 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 NIPA2Q8N8Q9 360 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 Q8N9G6 341 aaPredicted RBP11.79□□□□□ -0.52
TTC28-203ENST00000442232 GPR156Q8NFN8 814 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 SYN2Q92777 582 aaPredicted RBP11.79□□□□□ -0.52
TTC28-203ENST00000442232 COQ10AQ96MF6 247 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 MGME1Q9BQP7 344 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 GSDMCQ9BYG8 508 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 THAP2Q9H0W7 228 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 CARS2Q9HA77 564 aaKnown RBP11.79□□□□□ -0.52
TTC28-203ENST00000442232 CPNE5Q9HCH3 593 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 PCDH18Q9HCL0 1135 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 NT5MQ9NPB1 228 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 MRPL40Q9NQ50 206 aaKnown RBP11.79□□□□□ -0.52
TTC28-203ENST00000442232 ETNK2Q9NVF9 386 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 AKAP7Q9P0M2 348 aaPredicted RBP11.79□□□□□ -0.52
TTC28-203ENST00000442232 RCOR3Q9P2K3 495 aaPredicted RBP11.79□□□□□ -0.52
TTC28-203ENST00000442232 APPL1Q9UKG1 709 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 PCDHGC4Q9Y5F7 938 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 GCN1Q92616 2671 aaKnown RBP11.78□□□□□ -0.52
TTC28-203ENST00000442232 TTC24A2A3L6 582 aaPredicted RBP11.78□□□□□ -0.52
TTC28-203ENST00000442232 CDRT15L2A8MXV6 281 aa11.78□□□□□ -0.52
TTC28-203ENST00000442232 MYO1FO00160 1098 aa11.78□□□□□ -0.52
TTC28-203ENST00000442232 HTRA2O43464 458 aaPredicted RBP11.78□□□□□ -0.52
TTC28-203ENST00000442232 MAFKO60675 156 aa11.78□□□□□ -0.52
TTC28-203ENST00000442232 HEXIM1O94992 359 aaKnown RBP11.78□□□□□ -0.52
TTC28-203ENST00000442232 TPM3P06753 285 aa11.78□□□□□ -0.52
TTC28-203ENST00000442232 UGT1A5P35504 534 aa11.78□□□□□ -0.52
TTC28-203ENST00000442232 TRIM23P36406 574 aa11.78□□□□□ -0.52
TTC28-203ENST00000442232 PDX1P52945 283 aa11.78□□□□□ -0.52
TTC28-203ENST00000442232 EPHB1P54762 984 aa11.78□□□□□ -0.52
TTC28-203ENST00000442232 UBASH3AP57075 661 aa11.78□□□□□ -0.52
TTC28-203ENST00000442232 ZBED6P86452 979 aa11.78□□□□□ -0.52
TTC28-203ENST00000442232 IQCB1Q15051 598 aa11.78□□□□□ -0.52
TTC28-203ENST00000442232 CERCAMQ5T4B2 595 aa11.78□□□□□ -0.52
TTC28-203ENST00000442232 TIGD7Q6NT04 549 aaPredicted RBP11.78□□□□□ -0.52
TTC28-203ENST00000442232 CCDC81Q6ZN84 652 aa11.78□□□□□ -0.52
TTC28-203ENST00000442232 HEATR4Q86WZ0 1026 aa11.78□□□□□ -0.52
TTC28-203ENST00000442232 TP53INP2Q8IXH6 220 aa11.78□□□□□ -0.52
TTC28-203ENST00000442232 SPOCK2Q92563 424 aa11.78□□□□□ -0.52
TTC28-203ENST00000442232 TMEM159Q96B96 161 aa11.78□□□□□ -0.52
TTC28-203ENST00000442232 DTD2Q96FN9 168 aa11.78□□□□□ -0.52
TTC28-203ENST00000442232 FOXP3Q9BZS1 431 aa11.78□□□□□ -0.52
TTC28-203ENST00000442232 POLR1EQ9GZS1 481 aaKnown RBP11.78□□□□□ -0.52
TTC28-203ENST00000442232 ZMYND15Q9H091 742 aa11.78□□□□□ -0.52
TTC28-203ENST00000442232 TMEM168Q9H0V1 697 aa11.78□□□□□ -0.52
TTC28-203ENST00000442232 NOD2Q9HC29 1040 aa11.78□□□□□ -0.52
TTC28-203ENST00000442232 LRIT1Q9P2V4 623 aa11.78□□□□□ -0.52
TTC28-203ENST00000442232 PISDQ9UG56 409 aa11.78□□□□□ -0.52
TTC28-203ENST00000442232 RABGEF1Q9UJ41 708 aa11.78□□□□□ -0.52
TTC28-203ENST00000442232 DNPEPQ9ULA0 475 aa11.78□□□□□ -0.52
TTC28-203ENST00000442232 LUC7L2Q9Y383 392 aaKnown RBP11.78□□□□□ -0.52
TTC28-203ENST00000442232 TTLL3Q9Y4R7 772 aa11.78□□□□□ -0.52
TTC28-203ENST00000442232 A0A1W2PNU3 283 aaPredicted RBP11.77□□□□□ -0.53
TTC28-203ENST00000442232 SYCE3A1L190 88 aa11.77□□□□□ -0.53
TTC28-203ENST00000442232 RHPN2P1A8MT19 583 aa11.77□□□□□ -0.53
TTC28-203ENST00000442232 NUDT21O43809 227 aaKnown RBP11.77□□□□□ -0.53
TTC28-203ENST00000442232 PGLSO95336 258 aa11.77□□□□□ -0.53
TTC28-203ENST00000442232 PYGLP06737 847 aa11.77□□□□□ -0.53
TTC28-203ENST00000442232 CCNB1P14635 433 aa11.77□□□□□ -0.53
TTC28-203ENST00000442232 TCF4P15884 667 aa11.77□□□□□ -0.53
TTC28-203ENST00000442232 CR2P20023 1033 aa11.77□□□□□ -0.53
TTC28-203ENST00000442232 CCKBRP32239 447 aa11.77□□□□□ -0.53
TTC28-203ENST00000442232 ETV3P41162 512 aa11.77□□□□□ -0.53
TTC28-203ENST00000442232 GPR1P46091 355 aa11.77□□□□□ -0.53
TTC28-203ENST00000442232 GNPDA1P46926 289 aa11.77□□□□□ -0.53
TTC28-203ENST00000442232 MAXP61244 160 aa11.77□□□□□ -0.53
TTC28-203ENST00000442232 SLC25A11Q02978 314 aaKnown RBP11.77□□□□□ -0.53
TTC28-203ENST00000442232 CFHR1Q03591 330 aa11.77□□□□□ -0.53
TTC28-203ENST00000442232 TRAF2Q12933 501 aa11.77□□□□□ -0.53
TTC28-203ENST00000442232 ZFYVE27Q5T4F4 411 aa11.77□□□□□ -0.53
TTC28-203ENST00000442232 PHF19Q5T6S3 580 aa11.77□□□□□ -0.53
TTC28-203ENST00000442232 HGSNATQ68CP4 663 aa11.77□□□□□ -0.53
TTC28-203ENST00000442232 SPRED1Q7Z699 444 aa11.77□□□□□ -0.53
TTC28-203ENST00000442232 B3GNT8Q7Z7M8 397 aa11.77□□□□□ -0.53
TTC28-203ENST00000442232 MAP7D3Q8IWC1 876 aa11.77□□□□□ -0.53
TTC28-203ENST00000442232 CPLX3Q8WVH0 158 aa11.77□□□□□ -0.53
TTC28-203ENST00000442232 SCRN2Q96FV2 425 aa11.77□□□□□ -0.53
TTC28-203ENST00000442232 PRR11Q96HE9 360 aaPredicted RBP11.77□□□□□ -0.53
TTC28-203ENST00000442232 BTBD6Q96KE9 485 aa11.77□□□□□ -0.53
TTC28-203ENST00000442232 ZNF830Q96NB3 372 aaPredicted RBP11.77□□□□□ -0.53
TTC28-203ENST00000442232 CMKLR1Q99788 373 aa11.77□□□□□ -0.53
TTC28-203ENST00000442232 ANP32EQ9BTT0 268 aa11.77□□□□□ -0.53
TTC28-203ENST00000442232 LGR4Q9BXB1 951 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms