RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 TMEM245Q9H330 911 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 DPEP3Q9H4B8 488 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 CASS4Q9NQ75 786 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 NKIRAS1Q9NYS0 192 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 SEL1LQ9UBV2 794 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 STK17AQ9UEE5 414 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 PISDQ9UG56 409 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 SERGEFQ9UGK8 458 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 GGT7Q9UJ14 662 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 NAGPAQ9UK23 515 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 ACSL6Q9UKU0 697 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 FZD4Q9ULV1 537 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 EXOC7Q9UPT5 735 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 CHKBQ9Y259 395 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 PCDHA3Q9Y5H8 950 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 F8P00451 2351 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 TDRD6O60522 2096 aaKnown RBP6.54□□□□□ -1.36
HDAC6-210ENST00000441703 ZFHX3Q15911 3703 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 RP1L1Q8IWN7 2480 aaPredicted RBP6.54□□□□□ -1.36
HDAC6-210ENST00000441703 DOCK9Q9BZ29 2069 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 RP1P56715 2156 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 WIPF3A6NGB9 483 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 C10orf142B7Z368 130 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 K7ESM1 405 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 CLDN5O00501 218 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 DDX3XO00571 662 aaKnown RBP eCLIP6.53□□□□□ -1.36
HDAC6-210ENST00000441703 CCDC22O60826 627 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 PFDN1O60925 122 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 PHF2O75151 1096 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 E2F6O75461 281 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 CNTN5O94779 1100 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 PSMG1O95456 288 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 TNNC2P02585 160 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 CYP1A1P04798 512 aaPredicted RBP6.53□□□□□ -1.36
HDAC6-210ENST00000441703 PRKCGP05129 697 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 ATP5BP06576 529 aaKnown RBP6.53□□□□□ -1.36
HDAC6-210ENST00000441703 RNF224P0DH78 156 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 HGFP14210 728 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 VAV1P15498 845 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 WT1P19544 449 aaPredicted RBP6.53□□□□□ -1.36
HDAC6-210ENST00000441703 GARTP22102 1010 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 CTNNA2P26232 953 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 MAT2AP31153 395 aaKnown RBP6.53□□□□□ -1.36
HDAC6-210ENST00000441703 SLC6A4P31645 630 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 STX2P32856 288 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 GNL1P36915 607 aaPredicted RBP6.53□□□□□ -1.36
HDAC6-210ENST00000441703 RPIAP49247 311 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 DNA2P51530 1060 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 HADHBP55084 474 aaKnown RBP6.53□□□□□ -1.36
HDAC6-210ENST00000441703 BPIFB4P59827 614 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 ST8SIA6P61647 398 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 XIAPP98170 497 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 PPARDQ03181 441 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 SEPT6Q14141 434 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 NR0B2Q15466 257 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 CST6Q15828 149 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 CYP1B1Q16678 543 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 WDR72Q3MJ13 1102 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 POM121L1PQ3SYA9 428 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 KHDC1Q4VXA5 237 aaKnown RBP6.53□□□□□ -1.36
HDAC6-210ENST00000441703 TMEM215Q68D42 235 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 ZCCHC8Q6NZY4 707 aaKnown RBP6.53□□□□□ -1.36
HDAC6-210ENST00000441703 ALKBH5Q6P6C2 394 aaKnown RBP6.53□□□□□ -1.36
HDAC6-210ENST00000441703 MARK2Q7KZI7 788 aaKnown RBP6.53□□□□□ -1.36
HDAC6-210ENST00000441703 SV2BQ7L1I2 683 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 ZNF720Q7Z2F6 126 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 ADGRG6Q86SQ4 1221 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 ZNF554Q86TJ5 538 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 FAM35AQ86V20 835 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 VPS36Q86VN1 386 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 CCNJLQ8IV13 435 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 PASD1Q8IV76 773 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 ST13P4Q8IZP2 240 aaPredicted RBP6.53□□□□□ -1.36
HDAC6-210ENST00000441703 RIBC1Q8N443 379 aaPredicted RBP6.53□□□□□ -1.36
HDAC6-210ENST00000441703 ZSWIM2Q8NEG5 633 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 OR6B3Q8NGW1 331 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 FBXO25Q8TCJ0 367 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 EPS8L3Q8TE67 593 aaKnown RBP6.53□□□□□ -1.36
HDAC6-210ENST00000441703 NAT14Q8WUY8 206 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 WDR60Q8WVS4 1066 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 NRG4Q8WWG1 115 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 CTNNBL1Q8WYA6 563 aaPredicted RBP6.53□□□□□ -1.36
HDAC6-210ENST00000441703 GLMNQ92990 594 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 DGCR14Q96DF8 476 aaKnown RBP6.53□□□□□ -1.36
HDAC6-210ENST00000441703 SMARCD1Q96GM5 515 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 KCNK16Q96T55 309 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 ZNF184Q99676 751 aaPredicted RBP6.53□□□□□ -1.36
HDAC6-210ENST00000441703 STRA6Q9BX79 667 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 PACSIN1Q9BY11 444 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 DCLK3Q9C098 648 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 RSPH9Q9H1X1 276 aaPredicted RBP6.53□□□□□ -1.36
HDAC6-210ENST00000441703 ZHX3Q9H4I2 956 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 FBXO44Q9H4M3 255 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 OCEL1Q9H607 264 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 BLOC1S4Q9NUP1 217 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 KLHL11Q9NVR0 708 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 PTTG2Q9NZH5 202 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 WHRNQ9P202 907 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 HAO1Q9UJM8 370 aa6.53□□□□□ -1.36
HDAC6-210ENST00000441703 PAIP2BQ9ULR5 123 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms