RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 TRPV3Q8NET8 790 aa20.32■□□□□ 0.84
SHOX2-203ENST00000441443 TUBA1CQ9BQE3 449 aa20.32■□□□□ 0.84
SHOX2-203ENST00000441443 ADNPQ9H2P0 1102 aa20.32■□□□□ 0.84
SHOX2-203ENST00000441443 PRMT7Q9NVM4 692 aaPredicted RBP20.32■□□□□ 0.84
SHOX2-203ENST00000441443 RCOR3Q9P2K3 495 aaPredicted RBP20.32■□□□□ 0.84
SHOX2-203ENST00000441443 SEPT3Q9UH03 358 aa20.32■□□□□ 0.84
SHOX2-203ENST00000441443 TRAF6Q9Y4K3 522 aa20.32■□□□□ 0.84
SHOX2-203ENST00000441443 RAD54BQ9Y620 910 aa20.32■□□□□ 0.84
SHOX2-203ENST00000441443 DNAJC25-GNG10A0A024R161 153 aa20.32■□□□□ 0.84
SHOX2-203ENST00000441443 UBFD1O14562 309 aaKnown RBP20.32■□□□□ 0.84
SHOX2-203ENST00000441443 ESRP1Q6NXG1 681 aaKnown RBP20.32■□□□□ 0.84
SHOX2-203ENST00000441443 HACD2Q6Y1H2 254 aa20.32■□□□□ 0.84
SHOX2-203ENST00000441443 NPWQ8N729 165 aa20.32■□□□□ 0.84
SHOX2-203ENST00000441443 SNX27Q96L92 541 aa20.32■□□□□ 0.84
SHOX2-203ENST00000441443 SEPHS2Q99611 448 aa20.32■□□□□ 0.84
SHOX2-203ENST00000441443 GBA3Q9H227 469 aa20.32■□□□□ 0.84
SHOX2-203ENST00000441443 M0QYT0 321 aa20.32■□□□□ 0.84
SHOX2-203ENST00000441443 DCLK1O15075 740 aa20.32■□□□□ 0.84
SHOX2-203ENST00000441443 SEC14L2O76054 403 aa20.32■□□□□ 0.84
SHOX2-203ENST00000441443 PABPC1P11940 636 aaKnown RBP20.32■□□□□ 0.84
SHOX2-203ENST00000441443 CAPN3P20807 821 aa20.32■□□□□ 0.84
SHOX2-203ENST00000441443 GJA5P36382 358 aa20.32■□□□□ 0.84
SHOX2-203ENST00000441443 ARHGAP1Q07960 439 aa20.32■□□□□ 0.84
SHOX2-203ENST00000441443 XAF1Q6GPH4 301 aa20.32■□□□□ 0.84
SHOX2-203ENST00000441443 OTOP3Q7RTS5 596 aa20.32■□□□□ 0.84
SHOX2-203ENST00000441443 STARD8Q92502 1023 aa20.32■□□□□ 0.84
SHOX2-203ENST00000441443 ROPN1LQ96C74 230 aa20.32■□□□□ 0.84
SHOX2-203ENST00000441443 CCDC138Q96M89 665 aa20.32■□□□□ 0.84
SHOX2-203ENST00000441443 PCDH12Q9NPG4 1184 aa20.32■□□□□ 0.84
SHOX2-203ENST00000441443 NUP205Q92621 2012 aa20.31■□□□□ 0.84
SHOX2-203ENST00000441443 A8MU76 341 aa20.31■□□□□ 0.84
SHOX2-203ENST00000441443 GFAPP14136 432 aa20.31■□□□□ 0.84
SHOX2-203ENST00000441443 GPX3P22352 226 aa20.31■□□□□ 0.84
SHOX2-203ENST00000441443 AXLP30530 894 aa20.31■□□□□ 0.84
SHOX2-203ENST00000441443 RCVRNP35243 200 aa20.31■□□□□ 0.84
SHOX2-203ENST00000441443 HPCAL1P37235 193 aa20.31■□□□□ 0.84
SHOX2-203ENST00000441443 APLP1P51693 650 aa20.31■□□□□ 0.84
SHOX2-203ENST00000441443 DNASE1L3Q13609 305 aa20.31■□□□□ 0.84
SHOX2-203ENST00000441443 LAMC2Q13753 1193 aa20.31■□□□□ 0.84
SHOX2-203ENST00000441443 SLC25A52Q3SY17 297 aa20.31■□□□□ 0.84
SHOX2-203ENST00000441443 OTUD1Q5VV17 481 aaPredicted RBP20.31■□□□□ 0.84
SHOX2-203ENST00000441443 LARP4Q71RC2 724 aaKnown RBP eCLIP20.31■□□□□ 0.84
SHOX2-203ENST00000441443 SLC10A4Q96EP9 437 aa20.31■□□□□ 0.84
SHOX2-203ENST00000441443 SH3YL1Q96HL8 342 aaPredicted RBP20.31■□□□□ 0.84
SHOX2-203ENST00000441443 FAR2Q96K12 515 aa20.31■□□□□ 0.84
SHOX2-203ENST00000441443 RHOBTB2Q9BYZ6 727 aa20.31■□□□□ 0.84
SHOX2-203ENST00000441443 KLHL25Q9H0H3 589 aa20.31■□□□□ 0.84
SHOX2-203ENST00000441443 EML4Q9HC35 981 aaKnown RBP20.31■□□□□ 0.84
SHOX2-203ENST00000441443 SLC2A6Q9UGQ3 507 aa20.31■□□□□ 0.84
SHOX2-203ENST00000441443 SCN1AP35498 2009 aa20.31■□□□□ 0.84
SHOX2-203ENST00000441443 JCHAINP01591 159 aa20.31■□□□□ 0.84
SHOX2-203ENST00000441443 BDNFP23560 247 aa20.31■□□□□ 0.84
SHOX2-203ENST00000441443 SHMT2P34897 504 aa20.31■□□□□ 0.84
SHOX2-203ENST00000441443 SLC12A2P55011 1212 aa20.31■□□□□ 0.84
SHOX2-203ENST00000441443 PIGFQ07326 219 aa20.31■□□□□ 0.84
SHOX2-203ENST00000441443 PGS1Q32NB8 556 aa20.31■□□□□ 0.84
SHOX2-203ENST00000441443 SMYD5Q6GMV2 418 aa20.31■□□□□ 0.84
SHOX2-203ENST00000441443 EXOC8Q8IYI6 725 aa20.31■□□□□ 0.84
SHOX2-203ENST00000441443 SMG8Q8ND04 991 aaKnown RBP20.31■□□□□ 0.84
SHOX2-203ENST00000441443 SPATA22Q8NHS9 363 aa20.31■□□□□ 0.84
SHOX2-203ENST00000441443 RAB2BQ8WUD1 216 aa20.31■□□□□ 0.84
SHOX2-203ENST00000441443 MROQ9BYG7 248 aa20.31■□□□□ 0.84
SHOX2-203ENST00000441443 ING2Q9H160 280 aa20.31■□□□□ 0.84
SHOX2-203ENST00000441443 PIF1Q9H611 641 aa20.31■□□□□ 0.84
SHOX2-203ENST00000441443 ACTR3BQ9P1U1 418 aa20.31■□□□□ 0.84
SHOX2-203ENST00000441443 RSL1D1O76021 490 aaKnown RBP20.3■□□□□ 0.84
SHOX2-203ENST00000441443 IPO13O94829 963 aaKnown RBP20.3■□□□□ 0.84
SHOX2-203ENST00000441443 NOS2P35228 1153 aa20.3■□□□□ 0.84
SHOX2-203ENST00000441443 RFC2P35250 354 aa20.3■□□□□ 0.84
SHOX2-203ENST00000441443 SLC1A2P43004 574 aa20.3■□□□□ 0.84
SHOX2-203ENST00000441443 PLA2G16P53816 162 aa20.3■□□□□ 0.84
SHOX2-203ENST00000441443 DNAJB13P59910 316 aa20.3■□□□□ 0.84
SHOX2-203ENST00000441443 BST2Q10589 180 aaKnown RBP20.3■□□□□ 0.84
SHOX2-203ENST00000441443 CDH17Q12864 832 aa20.3■□□□□ 0.84
SHOX2-203ENST00000441443 AQP6Q13520 282 aa20.3■□□□□ 0.84
SHOX2-203ENST00000441443 KCNJ8Q15842 424 aa20.3■□□□□ 0.84
SHOX2-203ENST00000441443 RBM20Q5T481 1227 aaKnown RBP20.3■□□□□ 0.84
SHOX2-203ENST00000441443 LCN8Q6JVE9 175 aa20.3■□□□□ 0.84
SHOX2-203ENST00000441443 PDZD8Q8NEN9 1154 aa20.3■□□□□ 0.84
SHOX2-203ENST00000441443 DNAJB14Q8TBM8 379 aa20.3■□□□□ 0.84
SHOX2-203ENST00000441443 ZNF347Q96SE7 839 aa20.3■□□□□ 0.84
SHOX2-203ENST00000441443 OLFM1Q99784 485 aa20.3■□□□□ 0.84
SHOX2-203ENST00000441443 DGCR6LQ9BY27 220 aa20.3■□□□□ 0.84
SHOX2-203ENST00000441443 NSMCE4AQ9NXX6 385 aa20.3■□□□□ 0.84
SHOX2-203ENST00000441443 PAPPA2Q9BXP8 1791 aa20.3■□□□□ 0.84
SHOX2-203ENST00000441443 FXYD1O00168 92 aa20.3■□□□□ 0.84
SHOX2-203ENST00000441443 SLC6A2P23975 617 aa20.3■□□□□ 0.84
SHOX2-203ENST00000441443 PSMD5Q16401 504 aa20.3■□□□□ 0.84
SHOX2-203ENST00000441443 PYCR3Q53H96 274 aa20.3■□□□□ 0.84
SHOX2-203ENST00000441443 SYPL2Q5VXT5 272 aa20.3■□□□□ 0.84
SHOX2-203ENST00000441443 USP51Q70EK9 711 aa20.3■□□□□ 0.84
SHOX2-203ENST00000441443 EIF2AQ9BY44 585 aaKnown RBP20.3■□□□□ 0.84
SHOX2-203ENST00000441443 MROH8Q9H579 483 aa20.3■□□□□ 0.84
SHOX2-203ENST00000441443 ABCD2Q9UBJ2 740 aa20.3■□□□□ 0.84
SHOX2-203ENST00000441443 ZFC3H1O60293 1989 aaKnown RBP20.3■□□□□ 0.84
SHOX2-203ENST00000441443 CLDN25C9JDP6 229 aa20.29■□□□□ 0.84
SHOX2-203ENST00000441443 H3BRB1 525 aa20.29■□□□□ 0.84
SHOX2-203ENST00000441443 LSM1O15116 133 aaKnown RBP20.29■□□□□ 0.84
SHOX2-203ENST00000441443 ANGPT2O15123 496 aa20.29■□□□□ 0.84
SHOX2-203ENST00000441443 XYLBO75191 536 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms