RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 KLF10Q13118 480 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 UBAP2LQ14157 1087 aaKnown RBP6.4□□□□□ -1.38
CNOT1-202ENST00000441024 RFTN1Q14699 578 aaPredicted RBP6.4□□□□□ -1.38
CNOT1-202ENST00000441024 CCDC92Q53HC0 331 aaPredicted RBP6.4□□□□□ -1.38
CNOT1-202ENST00000441024 LLGL2Q6P1M3 1020 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 LUZP2Q86TE4 346 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 NPAS4Q8IUM7 802 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 ZNF567Q8N184 647 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 SLC35B2Q8TB61 432 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 OR8D1Q8WZ84 308 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 SPOCK2Q92563 424 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 SYNDIG1Q9H7V2 258 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 SLCO1B3Q9NPD5 702 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 PAPOLBQ9NRJ5 636 aaKnown RBP6.4□□□□□ -1.38
CNOT1-202ENST00000441024 PNPOQ9NVS9 261 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 CAB39Q9Y376 341 aaPredicted RBP6.4□□□□□ -1.38
CNOT1-202ENST00000441024 MRPS23Q9Y3D9 190 aaKnown RBP6.4□□□□□ -1.38
CNOT1-202ENST00000441024 RWDD3Q9Y3V2 267 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 ARL5CA6NH57 179 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 TMEM88BA6NKF7 163 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 PRR23D1E9PI22 279 aaPredicted RBP6.4□□□□□ -1.38
CNOT1-202ENST00000441024 TK2O00142 265 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 SLC7A4O43246 635 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 SLC22A3O75751 556 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 PDE9AO76083 593 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 GSTM1P09488 218 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 CLTBP09497 229 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 PRR23D2P0DMB1 279 aaPredicted RBP6.4□□□□□ -1.38
CNOT1-202ENST00000441024 COL6A1P12109 1028 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 PNLIPRP1P54315 467 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 NR1H2P55055 460 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 ITGA1P56199 1179 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 ARHGAP1Q07960 439 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 SLC1A5Q15758 541 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 LSM12Q3MHD2 195 aaKnown RBP6.4□□□□□ -1.38
CNOT1-202ENST00000441024 OTUD3Q5T2D3 398 aaPredicted RBP6.4□□□□□ -1.38
CNOT1-202ENST00000441024 CLNKQ7Z7G1 428 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 CROCCP3Q8IVE0 287 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 CCDC185Q8N715 623 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 ADCY4Q8NFM4 1077 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 CMASQ8NFW8 434 aaPredicted RBP6.4□□□□□ -1.38
CNOT1-202ENST00000441024 BCO2Q9BYV7 579 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 PIF1Q9H611 641 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 ZDHHC18Q9NUE0 388 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 STMN3Q9NZ72 180 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 WRAP73Q9P2S5 460 aaPredicted RBP6.4□□□□□ -1.38
CNOT1-202ENST00000441024 C3orf18Q9UK00 162 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 TMEM59LQ9UK28 342 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 KCNE2Q9Y6J6 123 aa6.4□□□□□ -1.38
CNOT1-202ENST00000441024 TBC1D3BA6NDS4 549 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 URADA6NGE7 173 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 KCNU1A8MYU2 1149 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 ZNF487B1APH4 448 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 AGPSO00116 658 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 GABRDO14764 452 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 GSC2O15499 205 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 GLUD1P00367 558 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 PSMB9P28065 219 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 CTNNB1P35222 781 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 RPS7P62081 194 aaKnown RBP6.4□□□□□ -1.39
CNOT1-202ENST00000441024 HSPA14Q0VDF9 509 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 GALNT3Q14435 633 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 TCEA2Q15560 299 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 KCNA10Q16322 511 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 CCDC142Q17RM4 750 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 SLC35G1Q2M3R5 365 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 TSTD2Q5T7W7 516 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 KIAA0930Q6ICG6 404 aaPredicted RBP6.4□□□□□ -1.39
CNOT1-202ENST00000441024 ABRAXAS1Q6UWZ7 409 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 TMEM110Q86TL2 294 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 DEPDC4Q8N2C3 294 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 MPP5Q8N3R9 675 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 ZSCAN18Q8TBC5 510 aaPredicted RBP6.4□□□□□ -1.39
CNOT1-202ENST00000441024 UTP15Q8TED0 518 aaKnown RBP6.4□□□□□ -1.39
CNOT1-202ENST00000441024 ZNF516Q92618 1163 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 RCN3Q96D15 328 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 NMD3Q96D46 503 aaKnown RBP6.4□□□□□ -1.39
CNOT1-202ENST00000441024 TPD52L3Q96J77 140 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 Q96MT0 163 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 ZNF599Q96NL3 588 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 OMDQ99983 421 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 OSBPL2Q9H1P3 480 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 CNTN3Q9P232 1028 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 CHD4Q14839 1912 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 A0A1B0GVM2 712 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 TCAF2A6NFQ2 919 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 KPNA4O00629 521 aaPredicted RBP6.4□□□□□ -1.39
CNOT1-202ENST00000441024 SPTLC1O15269 473 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 LYPLA1O75608 230 aaPredicted RBP6.4□□□□□ -1.39
CNOT1-202ENST00000441024 TM7SF2O76062 418 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 ABCB1P08183 1280 aaPredicted RBP6.4□□□□□ -1.39
CNOT1-202ENST00000441024 CDC42P60953 191 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 MAXP61244 160 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 SPIDRQ14159 915 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 QPCTQ16769 361 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 BROXQ5VW32 411 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 ERICH5Q6P6B1 374 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 TAC4Q86UU9 113 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 ALYREFQ86V81 257 aaKnown RBP6.4□□□□□ -1.39
CNOT1-202ENST00000441024 GPR180Q86V85 440 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms