RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 H3BNX3 289 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 SERPINE1P05121 402 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 FGF3P11487 239 aaPredicted RBP14.2□□□□□ -0.14
LIMD1-202ENST00000440097 STMN1P16949 149 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 HADHAP40939 763 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 WDR5P61964 334 aaKnown RBP14.2□□□□□ -0.14
LIMD1-202ENST00000440097 SMAD3P84022 425 aaKnown RBP14.2□□□□□ -0.14
LIMD1-202ENST00000440097 TEX26Q8N6G2 289 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 GABPB2Q8TAK5 448 aaPredicted RBP14.2□□□□□ -0.14
LIMD1-202ENST00000440097 ARRDC2Q8TBH0 407 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 AGR3Q8TD06 166 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 ACTRT2Q8TDY3 377 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 VWCEQ96DN2 955 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 MOCOSQ96EN8 888 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 CEP295NLQ96MC4 621 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 MAGEH1Q9H213 219 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 TREX1Q9NSU2 369 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 UBAP1Q9NZ09 502 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 UBA2Q9UBT2 640 aaPredicted RBP14.2□□□□□ -0.14
LIMD1-202ENST00000440097 LZTS1Q9Y250 596 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 ZNF510Q9Y2H8 683 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 MIA3Q5JRA6 1907 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 CASQ2O14958 399 aaPredicted RBP14.19□□□□□ -0.14
LIMD1-202ENST00000440097 CLDN11O75508 207 aa14.19□□□□□ -0.14
LIMD1-202ENST00000440097 EFEMP2O95967 443 aa14.19□□□□□ -0.14
LIMD1-202ENST00000440097 ATP6V1B1P15313 513 aa14.19□□□□□ -0.14
LIMD1-202ENST00000440097 CD151P48509 253 aa14.19□□□□□ -0.14
LIMD1-202ENST00000440097 IHHQ14623 411 aa14.19□□□□□ -0.14
LIMD1-202ENST00000440097 ADGRF1Q5T601 910 aa14.19□□□□□ -0.14
LIMD1-202ENST00000440097 TSTD2Q5T7W7 516 aa14.19□□□□□ -0.14
LIMD1-202ENST00000440097 KIAA0930Q6ICG6 404 aaPredicted RBP14.19□□□□□ -0.14
LIMD1-202ENST00000440097 KLC3Q6P597 504 aa14.19□□□□□ -0.14
LIMD1-202ENST00000440097 DEFB107AQ8IZN7 70 aa14.19□□□□□ -0.14
LIMD1-202ENST00000440097 RUVBL2Q9Y230 463 aaKnown RBP14.19□□□□□ -0.14
LIMD1-202ENST00000440097 TK2O00142 265 aa14.19□□□□□ -0.14
LIMD1-202ENST00000440097 AURKAO14965 403 aa14.19□□□□□ -0.14
LIMD1-202ENST00000440097 PEX1O43933 1283 aa14.19□□□□□ -0.14
LIMD1-202ENST00000440097 SIN3BO75182 1162 aa14.19□□□□□ -0.14
LIMD1-202ENST00000440097 KLHL2O95198 593 aa14.19□□□□□ -0.14
LIMD1-202ENST00000440097 CDK4P11802 303 aa14.19□□□□□ -0.14
LIMD1-202ENST00000440097 RFC2P35250 354 aa14.19□□□□□ -0.14
LIMD1-202ENST00000440097 BTKQ06187 659 aa14.19□□□□□ -0.14
LIMD1-202ENST00000440097 LDB1Q86U70 411 aaPredicted RBP14.19□□□□□ -0.14
LIMD1-202ENST00000440097 CCDC117Q8IWD4 279 aaPredicted RBP14.19□□□□□ -0.14
LIMD1-202ENST00000440097 MARVELD2Q8N4S9 558 aa14.19□□□□□ -0.14
LIMD1-202ENST00000440097 ZFP28Q8NHY6 868 aa14.19□□□□□ -0.14
LIMD1-202ENST00000440097 KCTD4Q8WVF5 259 aa14.19□□□□□ -0.14
LIMD1-202ENST00000440097 FATE1Q969F0 183 aa14.19□□□□□ -0.14
LIMD1-202ENST00000440097 ABTB1Q969K4 478 aaPredicted RBP14.19□□□□□ -0.14
LIMD1-202ENST00000440097 HDAC10Q969S8 669 aa14.19□□□□□ -0.14
LIMD1-202ENST00000440097 WBP2Q969T9 261 aa14.19□□□□□ -0.14
LIMD1-202ENST00000440097 ZNF689Q96CS4 500 aaPredicted RBP14.19□□□□□ -0.14
LIMD1-202ENST00000440097 RMDN1Q96DB5 314 aa14.19□□□□□ -0.14
LIMD1-202ENST00000440097 DCUN1D1Q96GG9 259 aa14.19□□□□□ -0.14
LIMD1-202ENST00000440097 CATSPER2Q96P56 530 aa14.19□□□□□ -0.14
LIMD1-202ENST00000440097 C11orf49Q9H6J7 331 aa14.19□□□□□ -0.14
LIMD1-202ENST00000440097 ARNT2Q9HBZ2 717 aa14.19□□□□□ -0.14
LIMD1-202ENST00000440097 MRM3Q9HC36 420 aaKnown RBP14.19□□□□□ -0.14
LIMD1-202ENST00000440097 ACSS2Q9NR19 701 aa14.19□□□□□ -0.14
LIMD1-202ENST00000440097 APOBEC2Q9Y235 224 aaKnown RBP14.19□□□□□ -0.14
LIMD1-202ENST00000440097 ACOT9Q9Y305 439 aa14.19□□□□□ -0.14
LIMD1-202ENST00000440097 INSL5Q9Y5Q6 135 aa14.19□□□□□ -0.14
LIMD1-202ENST00000440097 H0Y626 953 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 TEX28O15482 410 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 COQ9O75208 318 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 C1RP00736 705 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 ITGAXP20702 1163 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 ARRB2P32121 409 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 MAGEA8P43361 318 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 RAB10P61026 200 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 SLC12A1Q13621 1099 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 MYLK3Q32MK0 819 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 OGFRL1Q5TC84 451 aaPredicted RBP14.18□□□□□ -0.14
LIMD1-202ENST00000440097 RNF219Q5W0B1 726 aaPredicted RBP14.18□□□□□ -0.14
LIMD1-202ENST00000440097 TXNDC8Q6A555 127 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 CNSTQ6PJW8 725 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 CARNMT1Q8N4J0 409 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 ARL14EPQ8N8R7 260 aaPredicted RBP14.18□□□□□ -0.14
LIMD1-202ENST00000440097 PIWIL2Q8TC59 973 aaKnown RBP14.18□□□□□ -0.14
LIMD1-202ENST00000440097 CALML6Q8TD86 181 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 PDCD6IPQ8WUM4 868 aaKnown RBP14.18□□□□□ -0.14
LIMD1-202ENST00000440097 LZICQ8WZA0 190 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 MYRFLQ96LU7 910 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 RBM38Q9H0Z9 239 aaKnown RBP14.18□□□□□ -0.14
LIMD1-202ENST00000440097 SEPT3Q9UH03 358 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 KCTD3Q9Y597 815 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 MYOCOSA0A1B0GUC4 107 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 A0A1B0GVM2 712 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 TCAF2A6NFQ2 919 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 DNAJA2O60884 412 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 ZMPSTE24O75844 475 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 HSPA4LO95757 839 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 GRK2P25098 689 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 HOXD9P28356 352 aaPredicted RBP14.18□□□□□ -0.14
LIMD1-202ENST00000440097 MAGEA12P43365 314 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 RAB33AQ14088 237 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 LINGO4Q6UY18 593 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 ISL2Q96A47 359 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 SLC22A12Q96S37 553 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 ZBED2Q9BTP6 218 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms