RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 TMEM79Q9BSE2 394 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 LIN28AQ9H9Z2 209 aaKnown RBP13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 TSR3Q9UJK0 312 aaKnown RBP13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 SLC27A5Q9Y2P5 690 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 TIMM22Q9Y584 194 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 HEMK1Q9Y5R4 338 aaPredicted RBP13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 SMIM31A0A1B0GVY4 71 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 ARHGEF37A1IGU5 675 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 UNCXA6NJT0 531 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 PDLIM1O00151 329 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 TRIM24O15164 1050 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 AP1G1O43747 822 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 GOT2P00505 430 aaKnown RBP13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 APLP1P51693 650 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 TUSC3Q13454 348 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 IKBKEQ14164 716 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 OR4D1Q15615 310 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 HMBOX1Q6NT76 420 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 FBXL22Q6P050 247 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 SPPL2CQ8IUH8 684 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 AFAP1L2Q8N4X5 818 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 EXOC2Q96KP1 924 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 PIF1Q9H611 641 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 SLC4A7Q9Y6M7 1214 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 A0A0J9YYE9 177 aa13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 TNPO2O14787 897 aaKnown RBP13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 PIP5K1BO14986 540 aa13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 LDB2O43679 373 aa13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 POLD2P49005 469 aa13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 AFMIDQ63HM1 303 aa13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 KIAA0408Q6ZU52 694 aa13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 CATSPER1Q8NEC5 780 aa13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 HIC2Q96JB3 615 aa13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 SERPINB11Q96P15 392 aa13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 ZYG11BQ9C0D3 744 aa13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 MRM3Q9HC36 420 aaKnown RBP13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 SEMA4BQ9NPR2 832 aaPredicted RBP13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 UTP6Q9NYH9 597 aaKnown RBP13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 DICER1Q9UPY3 1922 aaKnown RBP13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 NOD1Q9Y239 953 aa13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 M0QZQ0 153 aa13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 SRP72O76094 671 aaKnown RBP13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 CDK14O94921 469 aa13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 GFAPP14136 432 aa13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 ATP6V1B2P21281 511 aa13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 CASP2P42575 452 aa13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 STX1BP61266 288 aa13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 TRIM32Q13049 653 aa13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 PTPRRQ15256 657 aa13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 C2orf69Q8N8R5 385 aa13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 TUBGCP3Q96CW5 907 aa13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 CCDC126Q96EE4 140 aa13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 TSPAN17Q96FV3 270 aa13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 MTG1Q9BT17 334 aaPredicted RBP13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 SLC25A23Q9BV35 468 aa13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 POLR3BQ9NW08 1133 aaPredicted RBP13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 SUCOQ9UBS9 1254 aaKnown RBP13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 CNOT6Q9ULM6 557 aaKnown RBP13.56□□□□□ -0.24
HERPUD1-204ENST00000439977 MYLKQ15746 1914 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 hCG_2014768A0A024R1R8 64 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 A0A0U1RQF3 1178 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 CCDC162PA2VCL2 907 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 SEC24DO94855 1032 aaPredicted RBP13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 MT-ND1P03886 318 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 CYP11A1P05108 521 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 SLC2A3P11169 496 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 AKR1A1P14550 325 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 OR1G1P47890 313 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 DYNC1I2Q13409 638 aaKnown RBP13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 LAMB3Q13751 1172 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 ZBTB49Q6ZSB9 765 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 DHFR2Q86XF0 187 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 ARRDC2Q8TBH0 407 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.55□□□□□ -0.245e-9■■■□□ 15.6
HERPUD1-204ENST00000439977 MAP10Q9P2G4 905 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 V9GYQ6 96 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 SOCS2O14508 198 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 CAPN15O75808 1086 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 CLIC3O95833 236 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 GNAO1P09471 354 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 ATXN1LP0C7T5 689 aaKnown RBP13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 CAPN3P20807 821 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 OR1E1P30953 314 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 DIO3P55073 304 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 TIAL1Q01085 375 aaKnown RBP eCLIP13.55□□□□□ -0.241e-6■■■■■ 34.1
HERPUD1-204ENST00000439977 POLD3Q15054 466 aaPredicted RBP13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 MAPRE2Q15555 327 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 UGT3A2Q3SY77 523 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 FUT11Q495W5 492 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 HABP4Q5JVS0 413 aaKnown RBP13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 KRT80Q6KB66 452 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 SERINC5Q86VE9 423 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 SLC22A9Q8IVM8 553 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 AHI1Q8N157 1196 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 TRIML2Q8N7C3 387 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 VPS33AQ96AX1 596 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 FAR2Q96K12 515 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 RANBP9Q96S59 729 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 CCT7Q99832 543 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 ARNT2Q9HBZ2 717 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms