RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 FAM149B1Q96BN6 582 aa3.6□□□□□ -1.83
VPS41-207ENST00000439468 C1orf74Q96LT6 269 aa3.6□□□□□ -1.83
VPS41-207ENST00000439468 ZNF570Q96NI8 536 aa3.6□□□□□ -1.83
VPS41-207ENST00000439468 KCNN2Q9H2S1 579 aa3.6□□□□□ -1.83
VPS41-207ENST00000439468 KAT14Q9H8E8 782 aa3.6□□□□□ -1.83
VPS41-207ENST00000439468 RANGRFQ9HD47 186 aaPredicted RBP3.6□□□□□ -1.83
VPS41-207ENST00000439468 KRCC1Q9NPI7 259 aaPredicted RBP3.6□□□□□ -1.83
VPS41-207ENST00000439468 HIF1ANQ9NWT6 349 aa3.6□□□□□ -1.83
VPS41-207ENST00000439468 DLGAP2Q9P1A6 1054 aa3.6□□□□□ -1.83
VPS41-207ENST00000439468 MYO6Q9UM54 1294 aa3.6□□□□□ -1.83
VPS41-207ENST00000439468 AAR2Q9Y312 384 aaKnown RBP3.6□□□□□ -1.83
VPS41-207ENST00000439468 LYVE1Q9Y5Y7 322 aa3.6□□□□□ -1.83
VPS41-207ENST00000439468 CACNA1IQ9P0X4 2223 aa3.6□□□□□ -1.83
VPS41-207ENST00000439468 K7ENM7 598 aa3.59□□□□□ -1.83
VPS41-207ENST00000439468 LCATP04180 440 aa3.59□□□□□ -1.83
VPS41-207ENST00000439468 MMP2P08253 660 aa3.59□□□□□ -1.83
VPS41-207ENST00000439468 ARSBP15848 533 aa3.59□□□□□ -1.83
VPS41-207ENST00000439468 MCM3P25205 808 aa3.59□□□□□ -1.83
VPS41-207ENST00000439468 ARRB2P32121 409 aa3.59□□□□□ -1.83
VPS41-207ENST00000439468 GABRB2P47870 512 aa3.59□□□□□ -1.83
VPS41-207ENST00000439468 GALCP54803 685 aa3.59□□□□□ -1.83
VPS41-207ENST00000439468 NAP1L1P55209 391 aaKnown RBP3.59□□□□□ -1.83
VPS41-207ENST00000439468 ZXDBP98169 803 aa3.59□□□□□ -1.83
VPS41-207ENST00000439468 GOLGA8DPQ0D2H9 430 aa3.59□□□□□ -1.83
VPS41-207ENST00000439468 NIPAL4Q0D2K0 466 aa3.59□□□□□ -1.83
VPS41-207ENST00000439468 OLIG2Q13516 323 aa3.59□□□□□ -1.83
VPS41-207ENST00000439468 CUL4AQ13619 759 aa3.59□□□□□ -1.83
VPS41-207ENST00000439468 PDE1CQ14123 709 aaPredicted RBP3.59□□□□□ -1.83
VPS41-207ENST00000439468 EIF2S3LQ2VIR3 472 aaKnown RBP3.59□□□□□ -1.83
VPS41-207ENST00000439468 DUSP28Q4G0W2 176 aa3.59□□□□□ -1.83
VPS41-207ENST00000439468 RILPL1Q5EBL4 403 aa3.59□□□□□ -1.83
VPS41-207ENST00000439468 TMEM198Q66K66 360 aa3.59□□□□□ -1.83
VPS41-207ENST00000439468 B3GNT6Q6ZMB0 384 aa3.59□□□□□ -1.83
VPS41-207ENST00000439468 MON1BQ7L1V2 547 aa3.59□□□□□ -1.83
VPS41-207ENST00000439468 ENOSF1Q7L5Y1 443 aa3.59□□□□□ -1.83
VPS41-207ENST00000439468 GSTA5Q7RTV2 222 aa3.59□□□□□ -1.83
VPS41-207ENST00000439468 PALB2Q86YC2 1186 aa3.59□□□□□ -1.83
VPS41-207ENST00000439468 C17orf53Q8N3J3 647 aaPredicted RBP3.59□□□□□ -1.83
VPS41-207ENST00000439468 SRBD1Q8N5C6 995 aaKnown RBP3.59□□□□□ -1.83
VPS41-207ENST00000439468 NEUROG1Q92886 237 aa3.59□□□□□ -1.83
VPS41-207ENST00000439468 IGSF8Q969P0 613 aa3.59□□□□□ -1.83
VPS41-207ENST00000439468 MIB2Q96AX9 1013 aa3.59□□□□□ -1.83
VPS41-207ENST00000439468 FBXL8Q96CD0 374 aa3.59□□□□□ -1.83
VPS41-207ENST00000439468 MXD3Q9BW11 206 aa3.59□□□□□ -1.83
VPS41-207ENST00000439468 SLC28A3Q9HAS3 691 aa3.59□□□□□ -1.83
VPS41-207ENST00000439468 PLAC1Q9HBJ0 212 aa3.59□□□□□ -1.83
VPS41-207ENST00000439468 MKKSQ9NPJ1 570 aaPredicted RBP3.59□□□□□ -1.83
VPS41-207ENST00000439468 GPR108Q9NPR9 543 aa3.59□□□□□ -1.83
VPS41-207ENST00000439468 RRP7BPQ9NSQ0 103 aa3.59□□□□□ -1.83
VPS41-207ENST00000439468 TMEM51Q9NW97 253 aa3.59□□□□□ -1.83
VPS41-207ENST00000439468 A0A1W2PQ09 198 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 TMEM202A6NGA9 273 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 INAFM1C9JVW0 142 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 H3BQ06 376 aaPredicted RBP3.58□□□□□ -1.84
VPS41-207ENST00000439468 TIMM23O14925 209 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 TUBBP07437 444 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 GNLYP22749 145 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 GCH1P30793 250 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 CLNS1AP54105 237 aaKnown RBP3.58□□□□□ -1.84
VPS41-207ENST00000439468 CDH8P55286 799 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 SNX16P57768 344 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 KCTD2Q14681 263 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 WTAPQ15007 396 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 CDONQ4KMG0 1287 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 FNBP1LQ5T0N5 605 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 LRIF1Q5T3J3 769 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 PDXDC1Q6P996 788 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 SFTPA2Q8IWL1 248 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 CCDC89Q8N998 374 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 HJURPQ8NCD3 748 aaPredicted RBP3.58□□□□□ -1.84
VPS41-207ENST00000439468 SMRP1Q8NCR6 262 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 BICD2Q8TD16 824 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 RND1Q92730 232 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 NSUN4Q96CB9 384 aaKnown RBP3.58□□□□□ -1.84
VPS41-207ENST00000439468 FAM120BQ96EK7 910 aaKnown RBP3.58□□□□□ -1.84
VPS41-207ENST00000439468 ELMOD3Q96FG2 381 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 MED30Q96HR3 178 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 SLC41A2Q96JW4 573 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 SLCO5A1Q9H2Y9 848 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 SMARCAD1Q9H4L7 1026 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 PDZD7Q9H5P4 517 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 ESRP2Q9H6T0 727 aaKnown RBP3.58□□□□□ -1.84
VPS41-207ENST00000439468 SYNCQ9H7C4 482 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 ANKEF1Q9NU02 776 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 SETD4Q9NVD3 440 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 OR6C3Q9NZP0 311 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 NRBP1Q9UHY1 535 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 RCOR1Q9UKL0 485 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 NENFQ9UMX5 172 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 PCDHA7Q9UN72 937 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 R3HDM2Q9Y2K5 976 aaKnown RBP3.58□□□□□ -1.84
VPS41-207ENST00000439468 PTGDR2Q9Y5Y4 395 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 UNC13AQ9UPW8 1703 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 KAT6BQ8WYB5 2073 aa3.58□□□□□ -1.84
VPS41-207ENST00000439468 A0A1W2PRG0 241 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 GAGE12JA6NER3 117 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 TTC36A6NLP5 189 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 MS4A18H0YCH9 400 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 UTYO14607 1347 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 FIBPO43427 364 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms