RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 HDAC11Q96DB2 347 aa13.41□□□□□ -0.26
ACTN1-204ENST00000438964 CCDC138Q96M89 665 aa13.41□□□□□ -0.26
ACTN1-204ENST00000438964 ZMAT2Q96NC0 199 aaKnown RBP13.41□□□□□ -0.26
ACTN1-204ENST00000438964 UHRF1Q96T88 793 aaPredicted RBP13.41□□□□□ -0.26
ACTN1-204ENST00000438964 KLK14Q9P0G3 267 aa13.41□□□□□ -0.26
ACTN1-204ENST00000438964 DNMT3BQ9UBC3 853 aaKnown RBP13.41□□□□□ -0.26
ACTN1-204ENST00000438964 TIMM22Q9Y584 194 aa13.41□□□□□ -0.26
ACTN1-204ENST00000438964 OR51F1A6NGY5 319 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 H0YJX3 145 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 DFFAO00273 331 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 JRKO75564 520 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 S100BP04271 92 aaPredicted RBP13.4□□□□□ -0.26
ACTN1-204ENST00000438964 TXNP10599 105 aaKnown RBP13.4□□□□□ -0.26
ACTN1-204ENST00000438964 PROZP22891 400 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 SLC6A2P23975 617 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 TKTP29401 623 aaKnown RBP13.4□□□□□ -0.26
ACTN1-204ENST00000438964 VBP1P61758 197 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 IL1RL1Q01638 556 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 GHRHRQ02643 423 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 TRAP1Q12931 704 aaKnown RBP13.4□□□□□ -0.26
ACTN1-204ENST00000438964 GRM1Q13255 1194 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 BTBD8Q5XKL5 378 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 DLK2Q6UY11 383 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 CCDC81Q6ZN84 652 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 SLC26A9Q7LBE3 791 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 SLC22A16Q86VW1 577 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 SCAIQ8N9R8 606 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 TRPC4APQ8TEL6 797 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 SNX27Q96L92 541 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 DOK1Q99704 481 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 SLC30A3Q99726 388 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.4□□□□□ -0.26
ACTN1-204ENST00000438964 PSME2Q9UL46 239 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 ANK1P16157 1881 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 SLCO1B7G3V0H7 640 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 FXYD1O00168 92 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 XPNPEP2O43895 674 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 RASAL1O95294 804 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 CYP2B6P20813 491 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 LAPTM4AQ15012 233 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 GPR158Q5T848 1215 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 THOC7Q6I9Y2 204 aaKnown RBP13.4□□□□□ -0.26
ACTN1-204ENST00000438964 HEATR4Q86WZ0 1026 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 MFSD2AQ8NA29 543 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 ZNF420Q8TAQ5 688 aaPredicted RBP13.4□□□□□ -0.26
ACTN1-204ENST00000438964 ESAMQ96AP7 390 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 TUBGCP3Q96CW5 907 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 ZNF419Q96HQ0 510 aaPredicted RBP13.4□□□□□ -0.26
ACTN1-204ENST00000438964 CASS4Q9NQ75 786 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 ABCB10Q9NRK6 738 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 TUBA8Q9NY65 449 aaPredicted RBP13.4□□□□□ -0.26
ACTN1-204ENST00000438964 TSR3Q9UJK0 312 aaKnown RBP13.4□□□□□ -0.26
ACTN1-204ENST00000438964 CRYL1Q9Y2S2 319 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 TMEM98Q9Y2Y6 226 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 TMED5Q9Y3A6 229 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 U3KQV3 271 aa13.4□□□□□ -0.26
ACTN1-204ENST00000438964 KPNA4O00629 521 aaPredicted RBP13.39□□□□□ -0.27
ACTN1-204ENST00000438964 PIP5K1BO14986 540 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 GFAPP14136 432 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 ARNTP27540 789 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 ADAM17P78536 824 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 OXA1LQ15070 435 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 PHKG1Q16816 387 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 OTUD1Q5VV17 481 aaPredicted RBP13.39□□□□□ -0.27
ACTN1-204ENST00000438964 IQSEC1Q6DN90 963 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 PSMA8Q8TAA3 256 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 C19orf60Q96EN9 201 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 RHNO1Q9BSD3 238 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 FICDQ9BVA6 458 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 SIK2Q9H0K1 926 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 PDZD7Q9H5P4 517 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 INTS7Q9NVH2 962 aaKnown RBP13.39□□□□□ -0.27
ACTN1-204ENST00000438964 ARMC1Q9NVT9 282 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 MID2Q9UJV3 735 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 GJD2Q9UKL4 321 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 USP34Q70CQ2 3546 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 A0A1W2PQ67 120 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 ATP5F1P24539 256 aaPredicted RBP13.39□□□□□ -0.27
ACTN1-204ENST00000438964 CD151P48509 253 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 GLUD2P49448 558 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 GSK3BP49841 420 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 TPI1P60174 286 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 SELENBP1Q13228 472 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 INAQ16352 499 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 PKDCCQ504Y2 493 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 ARMCX6Q7L4S7 300 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 ERO1BQ86YB8 467 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 GLMNQ92990 594 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 CHID1Q9BWS9 393 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 CCDC68Q9H2F9 335 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 EIF2B3Q9NR50 452 aaKnown RBP13.39□□□□□ -0.27
ACTN1-204ENST00000438964 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.39□□□□□ -0.27
ACTN1-204ENST00000438964 MTRRQ9UBK8 725 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 NUP214P35658 2090 aaPredicted RBP13.39□□□□□ -0.27
ACTN1-204ENST00000438964 NCF1BA6NI72 391 aaPredicted RBP13.39□□□□□ -0.27
ACTN1-204ENST00000438964 TRIM64CA6NLI5 447 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 NCF1CA8MVU1 366 aaPredicted RBP13.39□□□□□ -0.27
ACTN1-204ENST00000438964 CLDN25C9JDP6 229 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 IPO13O94829 963 aaKnown RBP13.39□□□□□ -0.27
ACTN1-204ENST00000438964 APOA4P06727 396 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms