RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 NPY6RQ99463 290 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 APOL4Q9BPW4 351 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 RAD21L1Q9H4I0 556 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 ZFYVE28Q9HCC9 887 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 PLK2Q9NYY3 685 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 USE1Q9NZ43 259 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 TRPM5Q9NZQ8 1165 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 OPTCQ9UBM4 332 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 TBC1D30Q9Y2I9 924 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 IGKV6D-21A0A0A0MT36 114 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 C5orf58C9J3I9 102 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 C9JVG2 144 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 H7C4K7 107 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 CCL22O00626 93 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 HCRTO43612 131 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 BCAS2O75934 225 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-205ENST00000438362 STBD1O95210 358 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 GPIP06744 558 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 ANXA6P08133 673 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 AKR1A1P14550 325 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 HCAR3P49019 387 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 RABGGTBP53611 331 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 TOP3AQ13472 1001 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-205ENST00000438362 PLCL1Q15111 1095 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 DGUOKQ16854 277 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 PITRM1Q5JRX3 1037 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 CNSTQ6PJW8 725 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 SPATA19Q7Z5L4 167 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 MON1AQ86VX9 555 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 PROSER1Q86XN7 944 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 LEMD2Q8NC56 503 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 PPP3R2Q96LZ3 170 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 GLT1D1Q96MS3 346 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 ADI1Q9BV57 179 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 MUC13Q9H3R2 512 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 RIBC2Q9H4K1 309 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 CXorf21Q9HAI6 301 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 SPON1Q9HCB6 807 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 ZBTB26Q9HCK0 441 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 ATAD3AQ9NVI7 634 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 SMPD3Q9NY59 655 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-205ENST00000438362 RBPJLQ9UBG7 517 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 KLQ9UEF7 1012 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 MAGEL2Q9UJ55 1249 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 ADAMTS6Q9UKP5 1117 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 PAPPAQ13219 1627 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 TMEM233B4DJY2 109 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 E7ENX8 843 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 ZSCAN9O15535 394 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-205ENST00000438362 SLC7A4O43246 635 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 TREHO43280 583 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 CELF2O95319 508 aaKnown RBP6.69□□□□□ -1.34
CSDE1-205ENST00000438362 CPSF4O95639 269 aaKnown RBP6.69□□□□□ -1.34
CSDE1-205ENST00000438362 PABPC4LP0CB38 370 aaKnown RBP6.69□□□□□ -1.34
CSDE1-205ENST00000438362 PAX3P23760 479 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 CHRNA4P43681 627 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 PRIM2P49643 509 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 CCNIQ14094 377 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 HNRNPDQ14103 355 aaKnown RBP6.69□□□□□ -1.34
CSDE1-205ENST00000438362 GALNT3Q14435 633 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 NR1D2Q14995 579 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 ZNF618Q5T7W0 954 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 FAM171A1Q5VUB5 890 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 STEAP4Q687X5 459 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 KLHDC10Q6PID8 442 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 HFE2Q6ZVN8 426 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 TMEM132CQ8N3T6 1108 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 CARNMT1Q8N4J0 409 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 BPIFB6Q8NFQ5 453 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 FTHL17Q9BXU8 183 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 FAM126AQ9BYI3 521 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-205ENST00000438362 PDGFDQ9GZP0 370 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-205ENST00000438362 TMEM161AQ9NX61 479 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 CNTN3Q9P232 1028 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 KANSL3Q9P2N6 904 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 ABT1Q9ULW3 272 aaKnown RBP6.69□□□□□ -1.34
CSDE1-205ENST00000438362 TIMM22Q9Y584 194 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 E9PAM4 449 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 FAM20BO75063 409 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 TPP2P29144 1249 aaPredicted RBP6.68□□□□□ -1.34
CSDE1-205ENST00000438362 HALP42357 657 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 RPS9P46781 194 aaKnown RBP6.68□□□□□ -1.34
CSDE1-205ENST00000438362 PPP3CCP48454 512 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 EIF2B2P49770 351 aaKnown RBP6.68□□□□□ -1.34
CSDE1-205ENST00000438362 ST13P50502 369 aaKnown RBP6.68□□□□□ -1.34
CSDE1-205ENST00000438362 RHDQ02161 417 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 DSC2Q02487 901 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 LIPEQ05469 1076 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 SDHAF4Q5VUM1 108 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 GLYATQ6IB77 296 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 CXCL17Q6UXB2 119 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 OR7A2PQ8NGA2 310 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 NRG4Q8WWG1 115 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 FAM210AQ96ND0 272 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 CDK5RAP1Q96SZ6 601 aaKnown RBP6.68□□□□□ -1.34
CSDE1-205ENST00000438362 EURLQ9NYK6 297 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 SPASTQ9UBP0 616 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 SUCOQ9UBS9 1254 aaKnown RBP6.68□□□□□ -1.34
CSDE1-205ENST00000438362 PCDHB7Q9Y5E2 793 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 MYO18AQ92614 2054 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms