RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 NDST4Q9H3R1 872 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 PLK3Q9H4B4 646 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 SLC28A3Q9HAS3 691 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 PDE7BQ9NP56 450 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 GPR108Q9NPR9 543 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 CISD1Q9NZ45 108 aaKnown RBP4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 MSRB1Q9NZV6 116 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 NFKBIL1Q9UBC1 381 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 ZHX1Q9UKY1 873 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 EXO1Q9UQ84 846 aaKnown RBP4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 CMAHPQ9Y471 501 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 NFE2L3Q9Y4A8 694 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 HS3ST3B1Q9Y662 390 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 GLOD5A6NK44 160 aa4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 KDM4EB2RXH2 506 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 MS4A18H0YCH9 400 aa4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 TPPPO94811 219 aa4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 CLDN7O95471 211 aa4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 FGBP02675 491 aa4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 HSP90AB1P08238 724 aaKnown RBP4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 EDN2P20800 178 aa4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 IL11P20809 199 aa4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 PON1P27169 355 aa4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 DCTDP32321 178 aa4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 CAPZA2P47755 286 aa4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 LIG4P49917 911 aa4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 HMGA2P52926 109 aa4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 PROK1P58294 105 aa4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 AIMP1Q12904 312 aaKnown RBP4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 CDC16Q13042 620 aa4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 IRF3Q14653 427 aa4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 SOWAHCQ53LP3 525 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 OTUD1Q5VV17 481 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 GARNL3Q5VVW2 1013 aa4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 PLEKHA7Q6IQ23 1121 aa4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 CRELD2Q6UXH1 353 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 SLC16A12Q6ZSM3 486 aa4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 KRT77Q7Z794 578 aa4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 MRPL10Q7Z7H8 261 aaKnown RBP4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 CCDC13Q8IYE1 715 aa4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 ARFGAP1Q8N6T3 406 aa4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 SPATA17Q96L03 361 aa4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 WDR77Q9BQA1 342 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 QTRT1Q9BXR0 403 aaKnown RBP4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 SIL1Q9H173 461 aa4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 R3HDMLQ9H3Y0 253 aa4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 TUBA8Q9NY65 449 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 IL36RNQ9UBH0 155 aa4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 FBXW11Q9UKB1 542 aa4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 RCOR1Q9UKL0 485 aa4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 TTC7AQ9ULT0 858 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 RPGRIP1LQ68CZ1 1315 aa4.63□□□□□ -1.67
HMGB1P45-201ENST00000435986 KANSL1LA0AUZ9 987 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 VWA5AO00534 786 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 SH2B2O14492 632 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 OGG1O15527 345 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 ITM2AO43736 263 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 MITFO75030 526 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 TBCAO75347 108 aaKnown RBP4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 AVILO75366 819 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 CYP1A2P05177 515 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 ABCB1P08183 1280 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 RRM1P23921 792 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 ME1P48163 572 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 PPP3CCP48454 512 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 METAP2P50579 478 aaKnown RBP eCLIP4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 PMS2P54278 862 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 ZP1P60852 638 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 COL10A1Q03692 680 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 GRIK2Q13002 908 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 MTX1Q13505 466 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 KCNC3Q14003 757 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 ASTE1Q2TB18 679 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 TCP11X2Q5H9J9 407 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 SPECC1Q5M775 1068 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 C10orf25Q5T742 122 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 DCAF12L2Q5VW00 463 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 KRT80Q6KB66 452 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 TMEM71Q6P5X7 295 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 CREBRFQ8IUR6 639 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 DSELQ8IZU8 1212 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 POGLUT1Q8NBL1 392 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 OR14L1PQ8NHC6 308 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 DPF1Q92782 380 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 ELMOD3Q96FG2 381 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 RADILQ96JH8 1075 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 OR2A14Q96R47 310 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 CENPOQ9BU64 300 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 ISCUQ9H1K1 167 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 KRCC1Q9NPI7 259 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 ADARB2Q9NS39 739 aaKnown RBP4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 NOL7Q9UMY1 257 aaKnown RBP4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 COG5Q9UP83 839 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 FRMD4BQ9Y2L6 1034 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 MAGED1Q9Y5V3 778 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 FAM169AQ9Y6X4 670 aa4.62□□□□□ -1.67
HMGB1P45-201ENST00000435986 FAM170AA1A519 330 aa4.61□□□□□ -1.67
HMGB1P45-201ENST00000435986 FAM90A8PA6NJQ4 464 aa4.61□□□□□ -1.67
HMGB1P45-201ENST00000435986 A6NL46 340 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms