RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 PLA2G15Q8NCC3 412 aa16.27■□□□□ 0.2
SMPD4-207ENST00000435455 ZNF548Q8NEK5 533 aaPredicted RBP16.27■□□□□ 0.2
SMPD4-207ENST00000435455 LPCAT1Q8NF37 534 aa16.27■□□□□ 0.2
SMPD4-207ENST00000435455 HAUS1Q96CS2 278 aa16.27■□□□□ 0.2
SMPD4-207ENST00000435455 DTD2Q96FN9 168 aa16.27■□□□□ 0.2
SMPD4-207ENST00000435455 TEKT5Q96M29 485 aa16.27■□□□□ 0.2
SMPD4-207ENST00000435455 WDR92Q96MX6 357 aa16.27■□□□□ 0.2
SMPD4-207ENST00000435455 RBM15Q96T37 977 aaKnown RBP eCLIP16.27■□□□□ 0.2
SMPD4-207ENST00000435455 VAT1Q99536 393 aa16.27■□□□□ 0.2
SMPD4-207ENST00000435455 FERMT1Q9BQL6 677 aa16.27■□□□□ 0.2
SMPD4-207ENST00000435455 TOR4AQ9NXH8 423 aa16.27■□□□□ 0.2
SMPD4-207ENST00000435455 NLGN3Q9NZ94 848 aa16.27■□□□□ 0.2
SMPD4-207ENST00000435455 SPASTQ9UBP0 616 aa16.27■□□□□ 0.2
SMPD4-207ENST00000435455 APOBEC3BQ9UH17 382 aaKnown RBP16.27■□□□□ 0.2
SMPD4-207ENST00000435455 OR1A2Q9Y585 309 aa16.27■□□□□ 0.2
SMPD4-207ENST00000435455 LRP4O75096 1905 aa16.26■□□□□ 0.19
SMPD4-207ENST00000435455 GOLGA8CPA6NN73 597 aa16.26■□□□□ 0.19
SMPD4-207ENST00000435455 H7C0C1 242 aa16.26■□□□□ 0.19
SMPD4-207ENST00000435455 DKK1O94907 266 aa16.26■□□□□ 0.19
SMPD4-207ENST00000435455 TJP3O95049 919 aa16.26■□□□□ 0.19
SMPD4-207ENST00000435455 FTCDO95954 541 aa16.26■□□□□ 0.19
SMPD4-207ENST00000435455 C1SP09871 688 aa16.26■□□□□ 0.19
SMPD4-207ENST00000435455 CDK4P11802 303 aa16.26■□□□□ 0.19
SMPD4-207ENST00000435455 TSHRP16473 764 aa16.26■□□□□ 0.19
SMPD4-207ENST00000435455 KELP23276 732 aa16.26■□□□□ 0.19
SMPD4-207ENST00000435455 ETV3P41162 512 aa16.26■□□□□ 0.19
SMPD4-207ENST00000435455 ATP5OP48047 213 aa16.26■□□□□ 0.19
SMPD4-207ENST00000435455 PPARDQ03181 441 aa16.26■□□□□ 0.19
SMPD4-207ENST00000435455 NOMO1Q15155 1222 aa16.26■□□□□ 0.19
SMPD4-207ENST00000435455 FAXCQ5TGI0 409 aa16.26■□□□□ 0.19
SMPD4-207ENST00000435455 LRRC66Q68CR7 880 aa16.26■□□□□ 0.19
SMPD4-207ENST00000435455 PNCKQ6P2M8 343 aa16.26■□□□□ 0.19
SMPD4-207ENST00000435455 HSD11B1LQ7Z5J1 315 aa16.26■□□□□ 0.19
SMPD4-207ENST00000435455 RAVER1Q8IY67 606 aaKnown RBP16.26■□□□□ 0.19
SMPD4-207ENST00000435455 PHACTR4Q8IZ21 702 aa16.26■□□□□ 0.19
SMPD4-207ENST00000435455 CHCHD4Q8N4Q1 142 aa16.26■□□□□ 0.19
SMPD4-207ENST00000435455 PNPLA1Q8N8W4 532 aa16.26■□□□□ 0.19
SMPD4-207ENST00000435455 TADA1Q96BN2 335 aa16.26■□□□□ 0.19
SMPD4-207ENST00000435455 LYSMD1Q96S90 227 aa16.26■□□□□ 0.19
SMPD4-207ENST00000435455 MLPHQ9BV36 600 aaPredicted RBP16.26■□□□□ 0.19
SMPD4-207ENST00000435455 DUSP23Q9BVJ7 150 aa16.26■□□□□ 0.19
SMPD4-207ENST00000435455 SCNM1Q9BWG6 230 aa16.26■□□□□ 0.19
SMPD4-207ENST00000435455 WDR26Q9H7D7 661 aa16.26■□□□□ 0.19
SMPD4-207ENST00000435455 KLF15Q9UIH9 416 aa16.26■□□□□ 0.19
SMPD4-207ENST00000435455 TRHDEQ9UKU6 1024 aa16.26■□□□□ 0.19
SMPD4-207ENST00000435455 GUCA1BQ9UMX6 200 aa16.26■□□□□ 0.19
SMPD4-207ENST00000435455 PCDHGA1Q9Y5H4 931 aa16.26■□□□□ 0.19
SMPD4-207ENST00000435455 ANKRD66B4E2M5 251 aa16.25■□□□□ 0.19
SMPD4-207ENST00000435455 PDE2AO00408 941 aaPredicted RBP16.25■□□□□ 0.19
SMPD4-207ENST00000435455 TRIM38O00635 465 aa16.25■□□□□ 0.19
SMPD4-207ENST00000435455 FFAR2O15552 330 aa16.25■□□□□ 0.19
SMPD4-207ENST00000435455 SIGLEC6O43699 453 aa16.25■□□□□ 0.19
SMPD4-207ENST00000435455 HYAL3O43820 417 aaPredicted RBP16.25■□□□□ 0.19
SMPD4-207ENST00000435455 ZNF189O75820 626 aaPredicted RBP16.25■□□□□ 0.19
SMPD4-207ENST00000435455 RASGRP1O95267 797 aa16.25■□□□□ 0.19
SMPD4-207ENST00000435455 PYGMP11217 842 aa16.25■□□□□ 0.19
SMPD4-207ENST00000435455 CKMT2P17540 419 aa16.25■□□□□ 0.19
SMPD4-207ENST00000435455 TEAD1P28347 426 aa16.25■□□□□ 0.19
SMPD4-207ENST00000435455 STC1P52823 247 aa16.25■□□□□ 0.19
SMPD4-207ENST00000435455 CDK18Q07002 472 aa16.25■□□□□ 0.19
SMPD4-207ENST00000435455 WASHC5Q12768 1159 aa16.25■□□□□ 0.19
SMPD4-207ENST00000435455 PTPRRQ15256 657 aa16.25■□□□□ 0.19
SMPD4-207ENST00000435455 QPCTQ16769 361 aa16.25■□□□□ 0.19
SMPD4-207ENST00000435455 PROX2Q3B8N5 592 aa16.25■□□□□ 0.19
SMPD4-207ENST00000435455 CCDC70Q6NSX1 233 aa16.25■□□□□ 0.19
SMPD4-207ENST00000435455 ENPP7Q6UWV6 458 aa16.25■□□□□ 0.19
SMPD4-207ENST00000435455 Q6ZVL8 140 aa16.25■□□□□ 0.19
SMPD4-207ENST00000435455 ZNF765Q7L2R6 523 aa16.25■□□□□ 0.19
SMPD4-207ENST00000435455 TECPR1Q7Z6L1 1165 aa16.25■□□□□ 0.19
SMPD4-207ENST00000435455 HID1Q8IV36 788 aa16.25■□□□□ 0.19
SMPD4-207ENST00000435455 LRRC8AQ8IWT6 810 aa16.25■□□□□ 0.19
SMPD4-207ENST00000435455 ACTL9Q8TC94 416 aa16.25■□□□□ 0.19
SMPD4-207ENST00000435455 LMX1AQ8TE12 382 aa16.25■□□□□ 0.19
SMPD4-207ENST00000435455 HTR3CQ8WXA8 447 aa16.25■□□□□ 0.19
SMPD4-207ENST00000435455 FUBP1Q96AE4 644 aaKnown RBP16.25■□□□□ 0.19
SMPD4-207ENST00000435455 PHPT1Q9NRX4 125 aaPredicted RBP16.25■□□□□ 0.19
SMPD4-207ENST00000435455 EVA1BQ9NVM1 165 aa16.25■□□□□ 0.19
SMPD4-207ENST00000435455 KLHL8Q9P2G9 620 aaPredicted RBP16.25■□□□□ 0.19
SMPD4-207ENST00000435455 KLQ9UEF7 1012 aa16.25■□□□□ 0.19
SMPD4-207ENST00000435455 NEUROG3Q9Y4Z2 214 aa16.25■□□□□ 0.19
SMPD4-207ENST00000435455 CAPN6Q9Y6Q1 641 aa16.25■□□□□ 0.19
SMPD4-207ENST00000435455 PTPRBP23467 1997 aa16.24■□□□□ 0.19
SMPD4-207ENST00000435455 GOLGA6L9A6NEM1 432 aa16.24■□□□□ 0.19
SMPD4-207ENST00000435455 TNFRSF10CO14798 259 aa16.24■□□□□ 0.19
SMPD4-207ENST00000435455 PTMAP06454 111 aaKnown RBP16.24■□□□□ 0.19
SMPD4-207ENST00000435455 CCDC175P0C221 793 aa16.24■□□□□ 0.19
SMPD4-207ENST00000435455 HK3P52790 923 aa16.24■□□□□ 0.19
SMPD4-207ENST00000435455 SRP54P61011 504 aaKnown RBP16.24■□□□□ 0.19
SMPD4-207ENST00000435455 OTUD4Q01804 1114 aaKnown RBP16.24■□□□□ 0.19
SMPD4-207ENST00000435455 PTSQ03393 145 aa16.24■□□□□ 0.19
SMPD4-207ENST00000435455 DPTQ07507 201 aa16.24■□□□□ 0.19
SMPD4-207ENST00000435455 ELOCQ15369 112 aa16.24■□□□□ 0.19
SMPD4-207ENST00000435455 ALG11Q2TAA5 492 aa16.24■□□□□ 0.19
SMPD4-207ENST00000435455 PRRT3Q5FWE3 981 aa16.24■□□□□ 0.19
SMPD4-207ENST00000435455 CDKL3Q8IVW4 592 aaPredicted RBP16.24■□□□□ 0.19
SMPD4-207ENST00000435455 NRSN1Q8IZ57 195 aa16.24■□□□□ 0.19
SMPD4-207ENST00000435455 RBFAQ8N0V3 343 aa16.24■□□□□ 0.19
SMPD4-207ENST00000435455 FSTL5Q8N475 847 aaPredicted RBP16.24■□□□□ 0.19
SMPD4-207ENST00000435455 FAM181AQ8N9Y4 354 aa16.24■□□□□ 0.19
SMPD4-207ENST00000435455 OR56A4Q8NGH8 313 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms