RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 MTMR11A4FU01 709 aa10.43□□□□□ -0.74
CD44-210ENST00000434472 TXNDC9O14530 226 aa10.43□□□□□ -0.74
CD44-210ENST00000434472 MRASO14807 208 aa10.43□□□□□ -0.74
CD44-210ENST00000434472 ACSL4O60488 711 aa10.43□□□□□ -0.74
CD44-210ENST00000434472 TRPA1O75762 1119 aa10.43□□□□□ -0.74
CD44-210ENST00000434472 TBX18O95935 607 aa10.43□□□□□ -0.74
CD44-210ENST00000434472 CAPNS1P04632 268 aa10.43□□□□□ -0.74
CD44-210ENST00000434472 ALDH2P05091 517 aa10.43□□□□□ -0.74
CD44-210ENST00000434472 ZCCHC18P0CG32 403 aa10.43□□□□□ -0.74
CD44-210ENST00000434472 HSPA8P11142 646 aaKnown RBP10.43□□□□□ -0.74
CD44-210ENST00000434472 CALRP27797 417 aaKnown RBP10.43□□□□□ -0.74
CD44-210ENST00000434472 PMLP29590 882 aa10.43□□□□□ -0.74
CD44-210ENST00000434472 ACVRL1P37023 503 aa10.43□□□□□ -0.74
CD44-210ENST00000434472 SLC11A2P49281 568 aa10.43□□□□□ -0.74
CD44-210ENST00000434472 CCNHP51946 323 aaPredicted RBP10.43□□□□□ -0.74
CD44-210ENST00000434472 SH3BGRP55822 239 aaPredicted RBP10.43□□□□□ -0.74
CD44-210ENST00000434472 ARPP19P56211 112 aa10.43□□□□□ -0.74
CD44-210ENST00000434472 C1QTNF8P60827 252 aa10.43□□□□□ -0.74
CD44-210ENST00000434472 TYSND1Q2T9J0 566 aa10.43□□□□□ -0.74
CD44-210ENST00000434472 SAMD4BQ5PRF9 694 aaKnown RBP10.43□□□□□ -0.74
CD44-210ENST00000434472 RASIP1Q5U651 963 aa10.43□□□□□ -0.74
CD44-210ENST00000434472 PRMT9Q6P2P2 845 aa10.43□□□□□ -0.74
CD44-210ENST00000434472 AFTPHQ6ULP2 937 aa10.43□□□□□ -0.74
CD44-210ENST00000434472 TMEM207Q6UWW9 146 aa10.43□□□□□ -0.74
CD44-210ENST00000434472 LARP4Q71RC2 724 aaKnown RBP eCLIP10.43□□□□□ -0.74
CD44-210ENST00000434472 EFL1Q7Z2Z2 1120 aaKnown RBP10.43□□□□□ -0.74
CD44-210ENST00000434472 SPATA24Q86W54 205 aa10.43□□□□□ -0.74
CD44-210ENST00000434472 LGI2Q8N0V4 545 aa10.43□□□□□ -0.74
CD44-210ENST00000434472 PCYOX1LQ8NBM8 494 aa10.43□□□□□ -0.74
CD44-210ENST00000434472 PDZD8Q8NEN9 1154 aa10.43□□□□□ -0.74
CD44-210ENST00000434472 OVCA2Q8WZ82 227 aa10.43□□□□□ -0.74
CD44-210ENST00000434472 DUS3LQ96G46 650 aaKnown RBP10.43□□□□□ -0.74
CD44-210ENST00000434472 DNAJC1Q96KC8 554 aaKnown RBP10.43□□□□□ -0.74
CD44-210ENST00000434472 SUDS3Q9H7L9 328 aaPredicted RBP10.43□□□□□ -0.74
CD44-210ENST00000434472 PDFQ9HBH1 243 aa10.43□□□□□ -0.74
CD44-210ENST00000434472 SPAG4Q9NPE6 437 aa10.43□□□□□ -0.74
CD44-210ENST00000434472 NLE1Q9NVX2 485 aaPredicted RBP10.43□□□□□ -0.74
CD44-210ENST00000434472 CACNA2D2Q9NY47 1150 aa10.43□□□□□ -0.74
CD44-210ENST00000434472 VPS9D1Q9Y2B5 631 aa10.43□□□□□ -0.74
CD44-210ENST00000434472 MTF2Q9Y483 593 aaPredicted RBP10.43□□□□□ -0.74
CD44-210ENST00000434472 ARIH1Q9Y4X5 557 aaPredicted RBP10.43□□□□□ -0.74
CD44-210ENST00000434472 KCTD3Q9Y597 815 aa10.43□□□□□ -0.74
CD44-210ENST00000434472 MIA3Q5JRA6 1907 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 SLC38A8A6NNN8 435 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 AZIN1O14977 448 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 HOXA2O43364 376 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 NRP2O60462 931 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 SLC4A1P02730 911 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 C8BP07358 591 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 PSMA3P25788 255 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 DPP6P42658 865 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 STC1P52823 247 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 PLK1P53350 603 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 CDH4P55283 916 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 MS4A2Q01362 244 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 GNA12Q03113 381 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 IHHQ14623 411 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 SPATS1Q496A3 300 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 LIN52Q52LA3 116 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 NADSYN1Q6IA69 706 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 ZNF549Q6P9A3 640 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 SLC30A9Q6PML9 568 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 TICAM1Q8IUC6 712 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 PTGR2Q8N8N7 351 aaPredicted RBP10.42□□□□□ -0.74
CD44-210ENST00000434472 STAG3L4Q8TBR4 150 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 ZFAND2BQ8WV99 257 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 C19orf60Q96EN9 201 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 CYP2S1Q96SQ9 504 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 SEPT5Q99719 369 aaPredicted RBP10.42□□□□□ -0.74
CD44-210ENST00000434472 MGME1Q9BQP7 344 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 TMEM175Q9BSA9 504 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 EFHD1Q9BUP0 239 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 CINPQ9BW66 212 aaPredicted RBP10.42□□□□□ -0.74
CD44-210ENST00000434472 TTLL2Q9BWV7 592 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 CCDC68Q9H2F9 335 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 COPS7BQ9H9Q2 264 aaPredicted RBP10.42□□□□□ -0.74
CD44-210ENST00000434472 PFDN4Q9NQP4 134 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 PLK2Q9NYY3 685 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 UBA2Q9UBT2 640 aaPredicted RBP10.42□□□□□ -0.74
CD44-210ENST00000434472 DNMT3LQ9UJW3 386 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 PACSIN3Q9UKS6 424 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 NDUFAF1Q9Y375 327 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 PCDHB7Q9Y5E2 793 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 TLL2Q9Y6L7 1015 aa10.42□□□□□ -0.74
CD44-210ENST00000434472 DOCK4Q8N1I0 1966 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 SMIM31A0A1B0GVY4 71 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 TTC24A2A3L6 582 aaPredicted RBP10.41□□□□□ -0.74
CD44-210ENST00000434472 OR51F1A6NGY5 319 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 CAPN8A6NHC0 703 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 C2orf81A6NN90 581 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 SYCE1LA8MT33 242 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 E7ENX8 843 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 FBP2O00757 339 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 TRIM24O15164 1050 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 KDELR3O43731 214 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 TLR5O60602 858 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 KERAO60938 352 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 RHOBTB1O94844 696 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 PYGLP06737 847 aa10.41□□□□□ -0.74
CD44-210ENST00000434472 CD1EP15812 388 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms