RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 ENTPD1P49961 510 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 LIMK2P53671 638 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 BCAR1P56945 870 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 EMC2Q15006 297 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 DPYSL2Q16555 572 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 DUOXA2Q1HG44 320 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 LSM12Q3MHD2 195 aaKnown RBP8.09□□□□□ -1.11
VTI1A-202ENST00000432306 ZBTB41Q5SVQ8 909 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 VWA5B1Q5TIE3 1220 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 SLC30A6Q6NXT4 461 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 C8orf82Q6P1X6 216 aaPredicted RBP8.09□□□□□ -1.11
VTI1A-202ENST00000432306 PAOXQ6QHF9 649 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 DCDC5Q6ZRR9 648 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 RSPH3Q86UC2 560 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 SLC9B2Q86UD5 537 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 ZNF598Q86UK7 904 aaKnown RBP8.09□□□□□ -1.11
VTI1A-202ENST00000432306 MPP5Q8N3R9 675 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 ESX1Q8N693 406 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 EMC1Q8N766 993 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 PCDH19Q8TAB3 1148 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 ANKRD49Q8WVL7 239 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 TRIB2Q92519 343 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 OR52B2Q96RD2 323 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 TAAR1Q96RJ0 339 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 FTHL17Q9BXU8 183 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 DNAI2Q9GZS0 605 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 ILKAPQ9H0C8 392 aaPredicted RBP8.09□□□□□ -1.11
VTI1A-202ENST00000432306 BRD8Q9H0E9 1235 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 WDR41Q9HAD4 459 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 SLC38A7Q9NVC3 462 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 OXSMQ9NWU1 459 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 TJP2Q9UDY2 1190 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 GNPTGQ9UJJ9 305 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 CPSF3Q9UKF6 684 aaKnown RBP8.09□□□□□ -1.11
VTI1A-202ENST00000432306 AP4S1Q9Y587 144 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 SLC30A1Q9Y6M5 507 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 SMCHD1A6NHR9 2005 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 MAGEB3O15480 346 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 ADCY6O43306 1168 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 HTRA2O43464 458 aaPredicted RBP8.09□□□□□ -1.11
VTI1A-202ENST00000432306 PRPSAP2O60256 369 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 KLHL41O60662 606 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 GUCA1CO95843 209 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 HOXC6P09630 235 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 MYF6P23409 242 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 SERPINB5P36952 375 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 ADH7P40394 386 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 MLH1P40692 756 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 RPL14P50914 215 aaKnown RBP8.09□□□□□ -1.11
VTI1A-202ENST00000432306 RPS6P62753 249 aaKnown RBP8.09□□□□□ -1.11
VTI1A-202ENST00000432306 PRKCEQ02156 737 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 PTPN11Q06124 597 aaPredicted RBP8.09□□□□□ -1.11
VTI1A-202ENST00000432306 TMEM62Q0P6H9 643 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 FOXC1Q12948 553 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 PRKAA1Q13131 559 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 PCBP2Q15366 365 aaKnown RBP eCLIP8.09□□□□□ -1.114e-7■■■■□ 25.4
VTI1A-202ENST00000432306 MOGQ16653 247 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 LRRC26Q2I0M4 334 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 SPANXN3Q5MJ09 141 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 TRNP1Q6NT89 227 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 NIPAL1Q6NVV3 410 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 CHSY3Q70JA7 882 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 LYSMD3Q7Z3D4 306 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 GPR141Q7Z602 305 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 CCDC60Q8IWA6 550 aaPredicted RBP8.09□□□□□ -1.11
VTI1A-202ENST00000432306 TMEM151AQ8N4L1 468 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 TDRD5Q8NAT2 981 aaKnown RBP8.09□□□□□ -1.11
VTI1A-202ENST00000432306 PDPRQ8NCN5 879 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 PNPT1Q8TCS8 783 aaKnown RBP8.09□□□□□ -1.11
VTI1A-202ENST00000432306 GPR152Q8TDT2 470 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 GIPC3Q8TF64 312 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 SOCS4Q8WXH5 440 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 EME1Q96AY2 570 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 TMIGD2Q96BF3 282 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 ZBTB45Q96K62 511 aaPredicted RBP8.09□□□□□ -1.11
VTI1A-202ENST00000432306 ALPK1Q96QP1 1244 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 RBBP8Q99708 897 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 CDC6Q99741 560 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 UNKQ9C0B0 810 aaKnown RBP8.09□□□□□ -1.11
VTI1A-202ENST00000432306 COQ10BQ9H8M1 238 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 CYP3A43Q9HB55 503 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 CD320Q9NPF0 282 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 FBXO28Q9NVF7 368 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 ARHGEF38Q9NXL2 777 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 RCOR3Q9P2K3 495 aaPredicted RBP8.09□□□□□ -1.11
VTI1A-202ENST00000432306 CD300AQ9UGN4 299 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 FBXO40Q9UH90 709 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 C19orf53Q9UNZ5 99 aaPredicted RBP8.09□□□□□ -1.11
VTI1A-202ENST00000432306 A0A0A0MRY4 1105 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 IGKV6D-21A0A0A0MT36 114 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 TNFRSF10AO00220 468 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 AIM2O14862 343 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 OGTO15294 1046 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 GRID2O43424 1007 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 SNAP91O60641 907 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 MSCO60682 206 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 CILPO75339 1184 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 DGKIO75912 1065 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 CABYRO75952 493 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 EDN1P05305 212 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms