RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 RIF1Q5UIP0 2472 aaKnown RBP6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 TMEM233B4DJY2 109 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 FAM86B1E9PN63 330 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 CASQ2O14958 399 aaPredicted RBP6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 TP73O15350 636 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 LRG1P02750 347 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 HEXBP07686 556 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 FAM86B2P0C5J1 330 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 STX2P32856 288 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 MGAT5Q09328 741 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 CHAF1BQ13112 559 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 CGB2Q6NT52 195 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 TMEM154Q6P9G4 183 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 BORAQ6PGQ7 559 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 C20orf204Q6ZNR8 217 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 RNF207Q6ZRF8 634 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 CYP2W1Q8TAV3 490 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 SPPL3Q8TCT6 385 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 ZNF483Q8TF39 744 aaPredicted RBP6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 SLCO2A1Q92959 643 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 SAAL1Q96ER3 474 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 MAGEB18Q96M61 343 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 FER1L6-AS2Q96M78 137 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 LENG8Q96PV6 779 aaPredicted RBP6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 PDCD2LQ9BRP1 358 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 ATXN3LQ9H3M9 355 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 MFSD1Q9H3U5 465 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 LRRC19Q9H756 370 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 DNAJC18Q9H819 358 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 AGPAT3Q9NRZ7 376 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 SPATS2LQ9NUQ6 558 aaKnown RBP6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 PRSS50Q9UI38 385 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 VAV3Q9UKW4 847 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 ASB3Q9Y575 518 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 PTPRSQ13332 1948 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 UBE4BO95155 1302 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 ADGRA3Q8IWK6 1321 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 TRAV34A0A0B4J273 112 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 NRG2O14511 850 aaPredicted RBP6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 MSH4O15457 936 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 SPOPO43791 374 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 TTC4O95801 387 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 CBX7O95931 251 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 CYP2J2P51589 502 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 HK3P52790 923 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 SHC2P98077 582 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 KRT17Q04695 432 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 BFSP1Q12934 665 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 CBX3Q13185 183 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 CUL2Q13617 745 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 ANGPT1Q15389 498 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 EPC2Q52LR7 807 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 DRICH1Q6PGQ1 229 aaPredicted RBP6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 RHBDF2Q6PJF5 856 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 ECHDC2Q86YB7 292 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 TUSC5Q8IXB3 177 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 DMRTC2Q8IXT2 367 aaPredicted RBP6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 TDRD5Q8NAT2 981 aaKnown RBP6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 LMO3Q8TAP4 145 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 WNT8BQ93098 351 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 GRAMD1AQ96CP6 724 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 FOXRED1Q96CU9 486 aaPredicted RBP6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 MSLNLQ96KJ4 702 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 KIF9Q9HAQ2 790 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 PARVGQ9HBI0 331 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 ACSS2Q9NR19 701 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 TXLNGQ9NUQ3 528 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 DMAC2Q9NW81 257 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 DSEQ9UL01 958 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 SORCS3Q9UPU3 1222 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 SQORQ9Y6N5 450 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 GVINP1Q7Z2Y8 2422 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 CHD6Q8TD26 2715 aa6.25□□□□□ -1.41
NIPAL3-205ENST00000432012 GREB1LQ9C091 1923 aaPredicted RBP6.24□□□□□ -1.41
NIPAL3-205ENST00000432012 M0QX08 132 aa6.24□□□□□ -1.41
NIPAL3-205ENST00000432012 GTPBP1O00178 669 aaKnown RBP6.24□□□□□ -1.41
NIPAL3-205ENST00000432012 VWA5AO00534 786 aa6.24□□□□□ -1.41
NIPAL3-205ENST00000432012 HGSO14964 777 aaPredicted RBP6.24□□□□□ -1.41
NIPAL3-205ENST00000432012 SCAMP1O15126 338 aa6.24□□□□□ -1.41
NIPAL3-205ENST00000432012 VEGFDO43915 354 aa6.24□□□□□ -1.41
NIPAL3-205ENST00000432012 AMHP03971 560 aa6.24□□□□□ -1.41
NIPAL3-205ENST00000432012 DLATP10515 647 aaKnown RBP6.24□□□□□ -1.41
NIPAL3-205ENST00000432012 HOXA11P31270 313 aaPredicted RBP6.24□□□□□ -1.41
NIPAL3-205ENST00000432012 THBS2P35442 1172 aa6.24□□□□□ -1.41
NIPAL3-205ENST00000432012 SREBF1P36956 1147 aa6.24□□□□□ -1.41
NIPAL3-205ENST00000432012 GPC3P51654 580 aa6.24□□□□□ -1.41
NIPAL3-205ENST00000432012 RWDD2BP57060 319 aa6.24□□□□□ -1.41
NIPAL3-205ENST00000432012 USP39Q53GS9 565 aaKnown RBP6.24□□□□□ -1.41
NIPAL3-205ENST00000432012 PRAMEF9Q5VWM5 478 aa6.24□□□□□ -1.41
NIPAL3-205ENST00000432012 STXBP4Q6ZWJ1 553 aa6.24□□□□□ -1.41
NIPAL3-205ENST00000432012 BEND5Q7L4P6 421 aa6.24□□□□□ -1.41
NIPAL3-205ENST00000432012 TRIM74Q86UV6 250 aa6.24□□□□□ -1.41
NIPAL3-205ENST00000432012 TRIM73Q86UV7 250 aa6.24□□□□□ -1.41
NIPAL3-205ENST00000432012 FRMD1Q8N878 549 aa6.24□□□□□ -1.41
NIPAL3-205ENST00000432012 ZNF564Q8TBZ8 553 aaPredicted RBP6.24□□□□□ -1.41
NIPAL3-205ENST00000432012 UTP4Q969X6 686 aaKnown RBP6.24□□□□□ -1.41
NIPAL3-205ENST00000432012 NAF1Q96HR8 494 aaKnown RBP6.24□□□□□ -1.41
NIPAL3-205ENST00000432012 FIZ1Q96SL8 496 aa6.24□□□□□ -1.41
NIPAL3-205ENST00000432012 THUMPD3Q9BV44 507 aaKnown RBP6.24□□□□□ -1.41
NIPAL3-205ENST00000432012 UBE2TQ9NPD8 197 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms