RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 LOXL2Q9Y4K0 774 aa14.92□□□□□ -0.02
MSH5-208ENST00000429846 SMTNL1A8MU46 457 aa14.91□□□□□ -0.02
MSH5-208ENST00000429846 B4DGG1 531 aa14.91□□□□□ -0.02
MSH5-208ENST00000429846 DDX3XO00571 662 aaKnown RBP eCLIP14.91□□□□□ -0.02
MSH5-208ENST00000429846 ZW10O43264 779 aa14.91□□□□□ -0.02
MSH5-208ENST00000429846 CPP00450 1065 aa14.91□□□□□ -0.02
MSH5-208ENST00000429846 LIPCP11150 499 aa14.91□□□□□ -0.02
MSH5-208ENST00000429846 CYP2A6P11509 494 aaPredicted RBP14.91□□□□□ -0.02
MSH5-208ENST00000429846 CR2P20023 1033 aa14.91□□□□□ -0.02
MSH5-208ENST00000429846 TEAD1P28347 426 aa14.91□□□□□ -0.02
MSH5-208ENST00000429846 VIPR1P32241 457 aa14.91□□□□□ -0.02
MSH5-208ENST00000429846 ZFP36L1Q07352 338 aaKnown RBP14.91□□□□□ -0.02
MSH5-208ENST00000429846 ILF3Q12906 894 aaKnown RBP eCLIP14.91□□□□□ -0.02
MSH5-208ENST00000429846 PEX6Q13608 980 aa14.91□□□□□ -0.02
MSH5-208ENST00000429846 ARHGEF7Q14155 803 aa14.91□□□□□ -0.02
MSH5-208ENST00000429846 CLPPQ16740 277 aaPredicted RBP14.91□□□□□ -0.02
MSH5-208ENST00000429846 BOLA3Q53S33 107 aa14.91□□□□□ -0.02
MSH5-208ENST00000429846 JAMLQ86YT9 394 aa14.91□□□□□ -0.02
MSH5-208ENST00000429846 GPBAR1Q8TDU6 330 aa14.91□□□□□ -0.02
MSH5-208ENST00000429846 NSMCE1Q8WV22 266 aa14.91□□□□□ -0.02
MSH5-208ENST00000429846 MED8Q96G25 268 aa14.91□□□□□ -0.02
MSH5-208ENST00000429846 CMKLR1Q99788 373 aa14.91□□□□□ -0.02
MSH5-208ENST00000429846 MGME1Q9BQP7 344 aa14.91□□□□□ -0.02
MSH5-208ENST00000429846 LGR4Q9BXB1 951 aa14.91□□□□□ -0.02
MSH5-208ENST00000429846 GSDMCQ9BYG8 508 aa14.91□□□□□ -0.02
MSH5-208ENST00000429846 TRNAU1APQ9NX07 287 aaKnown RBP14.91□□□□□ -0.02
MSH5-208ENST00000429846 PISDQ9UG56 409 aa14.91□□□□□ -0.02
MSH5-208ENST00000429846 HEXIM1O94992 359 aaKnown RBP14.9□□□□□ -0.02
MSH5-208ENST00000429846 PEX11BO96011 259 aa14.9□□□□□ -0.02
MSH5-208ENST00000429846 CCNB1P14635 433 aa14.9□□□□□ -0.02
MSH5-208ENST00000429846 CDH6P55285 790 aa14.9□□□□□ -0.02
MSH5-208ENST00000429846 CNGA3Q16281 694 aa14.9□□□□□ -0.02
MSH5-208ENST00000429846 ANO6Q4KMQ2 910 aa14.9□□□□□ -0.02
MSH5-208ENST00000429846 E4F1Q66K89 784 aaPredicted RBP14.9□□□□□ -0.02
MSH5-208ENST00000429846 POLNQ7Z5Q5 900 aa14.9□□□□□ -0.02
MSH5-208ENST00000429846 HEATR4Q86WZ0 1026 aa14.9□□□□□ -0.02
MSH5-208ENST00000429846 ATPAF2Q8N5M1 289 aa14.9□□□□□ -0.02
MSH5-208ENST00000429846 Q8N9G6 341 aaPredicted RBP14.9□□□□□ -0.02
MSH5-208ENST00000429846 PDCD6IPQ8WUM4 868 aaKnown RBP14.9□□□□□ -0.02
MSH5-208ENST00000429846 NSMCE3Q96MG7 304 aa14.9□□□□□ -0.02
MSH5-208ENST00000429846 TEX101Q9BY14 249 aa14.9□□□□□ -0.02
MSH5-208ENST00000429846 B3GNT4Q9C0J1 378 aa14.9□□□□□ -0.02
MSH5-208ENST00000429846 ISCUQ9H1K1 167 aa14.9□□□□□ -0.02
MSH5-208ENST00000429846 CARS2Q9HA77 564 aaKnown RBP14.9□□□□□ -0.02
MSH5-208ENST00000429846 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.9□□□□□ -0.02
MSH5-208ENST00000429846 SEPT10Q9P0V9 454 aa14.9□□□□□ -0.02
MSH5-208ENST00000429846 MOSPD1Q9UJG1 213 aa14.9□□□□□ -0.02
MSH5-208ENST00000429846 PHTF1Q9UMS5 762 aa14.9□□□□□ -0.02
MSH5-208ENST00000429846 RNF215Q9Y6U7 377 aa14.9□□□□□ -0.02
MSH5-208ENST00000429846 A0A1B0GTH6 734 aa14.89□□□□□ -0.03
MSH5-208ENST00000429846 A8MX80 341 aa14.89□□□□□ -0.03
MSH5-208ENST00000429846 J3QKU1 62 aa14.89□□□□□ -0.03
MSH5-208ENST00000429846 MAFKO60675 156 aa14.89□□□□□ -0.03
MSH5-208ENST00000429846 KRT10P13645 584 aa14.89□□□□□ -0.03
MSH5-208ENST00000429846 HGFP14210 728 aa14.89□□□□□ -0.03
MSH5-208ENST00000429846 CD82P27701 267 aa14.89□□□□□ -0.03
MSH5-208ENST00000429846 IL1R2P27930 398 aa14.89□□□□□ -0.03
MSH5-208ENST00000429846 LY6DQ14210 128 aa14.89□□□□□ -0.03
MSH5-208ENST00000429846 PIGHQ14442 188 aaPredicted RBP14.89□□□□□ -0.03
MSH5-208ENST00000429846 NR1D2Q14995 579 aa14.89□□□□□ -0.03
MSH5-208ENST00000429846 SMTNL2Q2TAL5 461 aa14.89□□□□□ -0.03
MSH5-208ENST00000429846 MAP9Q49MG5 647 aa14.89□□□□□ -0.03
MSH5-208ENST00000429846 KIAA1614Q5VZ46 1190 aa14.89□□□□□ -0.03
MSH5-208ENST00000429846 USP45Q70EL2 814 aa14.89□□□□□ -0.03
MSH5-208ENST00000429846 ZNF438Q7Z4V0 828 aa14.89□□□□□ -0.03
MSH5-208ENST00000429846 C17orf82Q86X59 251 aaPredicted RBP14.89□□□□□ -0.03
MSH5-208ENST00000429846 LRRC49Q8IUZ0 686 aa14.89□□□□□ -0.03
MSH5-208ENST00000429846 SLITRK4Q8IW52 837 aa14.89□□□□□ -0.03
MSH5-208ENST00000429846 TP53INP2Q8IXH6 220 aa14.89□□□□□ -0.03
MSH5-208ENST00000429846 PELI3Q8N2H9 469 aa14.89□□□□□ -0.03
MSH5-208ENST00000429846 CCL4L1Q8NHW4 92 aa14.89□□□□□ -0.03
MSH5-208ENST00000429846 TEKT4Q8WW24 435 aa14.89□□□□□ -0.03
MSH5-208ENST00000429846 DTD2Q96FN9 168 aa14.89□□□□□ -0.03
MSH5-208ENST00000429846 SCRN2Q96FV2 425 aa14.89□□□□□ -0.03
MSH5-208ENST00000429846 CSPG4P5Q96PW8 444 aa14.89□□□□□ -0.03
MSH5-208ENST00000429846 MCCC1Q96RQ3 725 aaPredicted RBP14.89□□□□□ -0.03
MSH5-208ENST00000429846 FRMD8Q9BZ67 464 aaPredicted RBP14.89□□□□□ -0.03
MSH5-208ENST00000429846 AKAP7Q9P0M2 348 aaPredicted RBP14.89□□□□□ -0.03
MSH5-208ENST00000429846 MYO1AQ9UBC5 1043 aa14.89□□□□□ -0.03
MSH5-208ENST00000429846 PCDHGC4Q9Y5F7 938 aa14.89□□□□□ -0.03
MSH5-208ENST00000429846 ZFC3H1O60293 1989 aaKnown RBP14.88□□□□□ -0.03
MSH5-208ENST00000429846 B8ZZF3 427 aa14.88□□□□□ -0.03
MSH5-208ENST00000429846 CPNE6O95741 557 aa14.88□□□□□ -0.03
MSH5-208ENST00000429846 CEACAM5P06731 702 aa14.88□□□□□ -0.03
MSH5-208ENST00000429846 LHCGRP22888 699 aa14.88□□□□□ -0.03
MSH5-208ENST00000429846 MMP13P45452 471 aa14.88□□□□□ -0.03
MSH5-208ENST00000429846 CDK3Q00526 305 aa14.88□□□□□ -0.03
MSH5-208ENST00000429846 DPTQ07507 201 aa14.88□□□□□ -0.03
MSH5-208ENST00000429846 TRAF2Q12933 501 aa14.88□□□□□ -0.03
MSH5-208ENST00000429846 FIGNQ5HY92 759 aa14.88□□□□□ -0.03
MSH5-208ENST00000429846 ARMC12Q5T9G4 340 aa14.88□□□□□ -0.03
MSH5-208ENST00000429846 MARC1Q5VT66 337 aa14.88□□□□□ -0.03
MSH5-208ENST00000429846 XKR5Q6UX68 686 aa14.88□□□□□ -0.03
MSH5-208ENST00000429846 PIM3Q86V86 326 aa14.88□□□□□ -0.03
MSH5-208ENST00000429846 NDUFAF2Q8N183 169 aa14.88□□□□□ -0.03
MSH5-208ENST00000429846 CBARPQ8N350 705 aaPredicted RBP14.88□□□□□ -0.03
MSH5-208ENST00000429846 PGBD5Q8N414 524 aa14.88□□□□□ -0.03
MSH5-208ENST00000429846 NIPA2Q8N8Q9 360 aa14.88□□□□□ -0.03
MSH5-208ENST00000429846 ZDHHC1Q8WTX9 485 aa14.88□□□□□ -0.03
MSH5-208ENST00000429846 HSPH1Q92598 858 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms