RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 CPSF7Q8N684 471 aaKnown RBP12.64□□□□□ -0.39
CPNE4-201ENST00000429747 OR4L1Q8NH43 312 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 SCAMP5Q8TAC9 235 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 MTFMTQ96DP5 389 aaKnown RBP12.64□□□□□ -0.39
CPNE4-201ENST00000429747 RTP4Q96DX8 246 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 NPY6RQ99463 290 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 ADGRE3Q9BY15 652 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 VRTNQ9H8Y1 702 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 CNOT6Q9ULM6 557 aaKnown RBP12.64□□□□□ -0.39
CPNE4-201ENST00000429747 A8MT66 165 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 NEK2P51955 445 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 SLC5A3P53794 718 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 PAFAH1B3Q15102 231 aaKnown RBP12.64□□□□□ -0.39
CPNE4-201ENST00000429747 BRMS1LQ5PSV4 323 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 LDLRAP1Q5SW96 308 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 TTC23Q5W5X9 447 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 GCNT7Q6ZNI0 430 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 KIAA0408Q6ZU52 694 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 GPRIN3Q6ZVF9 776 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 GPR142Q7Z601 462 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 MZB1Q8WU39 189 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 ELOVL6Q9H5J4 265 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 PCDHB5Q9Y5E4 795 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 U3KQV3 271 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 IGKV6D-21A0A0A0MT36 114 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 SMIM35A0A1B0GVV1 85 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 BBIP1A8MTZ0 92 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 RNASEH2AO75792 299 aaKnown RBP12.64□□□□□ -0.39
CPNE4-201ENST00000429747 SMPD1P17405 629 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 SCNN1AP37088 669 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 RHOAP61586 193 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 NRG1Q02297 640 aaPredicted RBP12.64□□□□□ -0.39
CPNE4-201ENST00000429747 VEPH1Q14D04 833 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 HERC3Q15034 1050 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 ACAP2Q15057 778 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 TSTD2Q5T7W7 516 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 ARHGAP36Q6ZRI8 547 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 TLR8Q9NR97 1041 aaKnown RBP12.64□□□□□ -0.39
CPNE4-201ENST00000429747 SMPD4Q9NXE4 827 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 UBA2Q9UBT2 640 aaPredicted RBP12.64□□□□□ -0.39
CPNE4-201ENST00000429747 GIMAP2Q9UG22 337 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 VPS28Q9UK41 221 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 TRPV2Q9Y5S1 764 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 LINC00854A0A1B0GVQ3 168 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 TCRBV5S1A1TA0A578 114 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 TTC24A2A3L6 582 aaPredicted RBP12.63□□□□□ -0.39
CPNE4-201ENST00000429747 A8MX80 341 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 SLC22A2O15244 555 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 FAM189A1O60320 539 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 ASLP04424 464 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 MTHFD1P11586 935 aaKnown RBP12.63□□□□□ -0.39
CPNE4-201ENST00000429747 GHRHRQ02643 423 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 PCBP1Q15365 356 aaKnown RBP eCLIP12.63□□□□□ -0.39
CPNE4-201ENST00000429747 RGS21Q2M5E4 152 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 TTLL9Q3SXZ7 439 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 TMEM214Q6NUQ4 689 aaKnown RBP12.63□□□□□ -0.39
CPNE4-201ENST00000429747 TMEM26Q6ZUK4 368 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 BNIPLQ7Z465 357 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 TBC1D21Q8IYX1 336 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 MLPHQ9BV36 600 aaPredicted RBP12.63□□□□□ -0.39
CPNE4-201ENST00000429747 PNMA8BQ9ULN7 279 aaPredicted RBP12.63□□□□□ -0.39
CPNE4-201ENST00000429747 FAM32AQ9Y421 112 aaKnown RBP12.63□□□□□ -0.39
CPNE4-201ENST00000429747 IQCA1LA6NCM1 817 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 E9PAM4 449 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 EI24O14681 340 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 ONECUT3O60422 494 aaPredicted RBP12.63□□□□□ -0.39
CPNE4-201ENST00000429747 CCR3P51677 355 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 RPL38P63173 70 aaKnown RBP12.63□□□□□ -0.39
CPNE4-201ENST00000429747 CDH18Q13634 790 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 MAPKAPK3Q16644 382 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 PPP1R3AQ16821 1122 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 C9orf131Q5VYM1 1079 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 GLYATQ6IB77 296 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 CARNMT1Q8N4J0 409 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 NKAPQ8N5F7 415 aaKnown RBP12.63□□□□□ -0.39
CPNE4-201ENST00000429747 TXNDC5Q8NBS9 432 aaKnown RBP12.63□□□□□ -0.39
CPNE4-201ENST00000429747 SEPT8Q92599 483 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 NTAN1Q96AB6 310 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 CENPNQ96H22 339 aaPredicted RBP12.63□□□□□ -0.39
CPNE4-201ENST00000429747 RAD21L1Q9H4I0 556 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 SMPD3Q9NY59 655 aaPredicted RBP12.63□□□□□ -0.39
CPNE4-201ENST00000429747 MAST2Q6P0Q8 1798 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 A0A1W2PQH9 124 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 MOXD2PA6NHM9 499 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 KPNA4O00629 521 aaPredicted RBP12.63□□□□□ -0.39
CPNE4-201ENST00000429747 RAD51BO15315 384 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 CST1P01037 141 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 MSH3P20585 1137 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 RPS9P46781 194 aaKnown RBP12.63□□□□□ -0.39
CPNE4-201ENST00000429747 YAP1P46937 504 aaKnown RBP12.63□□□□□ -0.39
CPNE4-201ENST00000429747 PIK3CGP48736 1102 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 RHDQ02161 417 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 STEAP4Q687X5 459 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 KIAA0930Q6ICG6 404 aaPredicted RBP12.63□□□□□ -0.39
CPNE4-201ENST00000429747 LRRC49Q8IUZ0 686 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 STYXQ8WUJ0 223 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 PTCD2Q8WV60 388 aaKnown RBP12.63□□□□□ -0.39
CPNE4-201ENST00000429747 MAF1Q9H063 256 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 ALG2Q9H553 416 aa12.63□□□□□ -0.39
CPNE4-201ENST00000429747 RMND5AQ9H871 391 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms