RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 GBF1Q92538 1859 aa16.24■□□□□ 0.19
MBD4-203ENST00000429544 SKAP2O75563 359 aaPredicted RBP16.24■□□□□ 0.19
MBD4-203ENST00000429544 TMCC1O94876 653 aa16.24■□□□□ 0.19
MBD4-203ENST00000429544 EPHB1P54762 984 aa16.24■□□□□ 0.19
MBD4-203ENST00000429544 SULT2A1Q06520 285 aa16.24■□□□□ 0.19
MBD4-203ENST00000429544 RAB33AQ14088 237 aa16.24■□□□□ 0.19
MBD4-203ENST00000429544 TAF11Q15544 211 aa16.24■□□□□ 0.19
MBD4-203ENST00000429544 HERC6Q8IVU3 1022 aa16.24■□□□□ 0.19
MBD4-203ENST00000429544 DEFB107AQ8IZN7 70 aa16.24■□□□□ 0.19
MBD4-203ENST00000429544 RYBPQ8N488 228 aaPredicted RBP16.24■□□□□ 0.19
MBD4-203ENST00000429544 TTC16Q8NEE8 873 aa16.24■□□□□ 0.19
MBD4-203ENST00000429544 DIS3LQ8TF46 1054 aaKnown RBP16.24■□□□□ 0.19
MBD4-203ENST00000429544 EXT2Q93063 718 aa16.24■□□□□ 0.19
MBD4-203ENST00000429544 PTERQ96BW5 349 aa16.24■□□□□ 0.19
MBD4-203ENST00000429544 RSRC1Q96IZ7 334 aaKnown RBP16.24■□□□□ 0.19
MBD4-203ENST00000429544 ZFRQ96KR1 1074 aaKnown RBP16.24■□□□□ 0.19
MBD4-203ENST00000429544 TOX2Q96NM4 488 aa16.24■□□□□ 0.19
MBD4-203ENST00000429544 TMEM39AQ9NV64 488 aa16.24■□□□□ 0.19
MBD4-203ENST00000429544 UBA6A0AVT1 1052 aaPredicted RBP16.23■□□□□ 0.19
MBD4-203ENST00000429544 F8W8V4 182 aa16.23■□□□□ 0.19
MBD4-203ENST00000429544 TBX10O75333 385 aa16.23■□□□□ 0.19
MBD4-203ENST00000429544 PDE5AO76074 875 aa16.23■□□□□ 0.19
MBD4-203ENST00000429544 F11P03951 625 aa16.23■□□□□ 0.19
MBD4-203ENST00000429544 MZF1P28698 734 aaPredicted RBP16.23■□□□□ 0.19
MBD4-203ENST00000429544 KCNC1P48547 511 aa16.23■□□□□ 0.19
MBD4-203ENST00000429544 TAF1AQ15573 450 aaPredicted RBP16.23■□□□□ 0.19
MBD4-203ENST00000429544 PPM1LQ5SGD2 360 aa16.23■□□□□ 0.19
MBD4-203ENST00000429544 SNX32Q86XE0 403 aa16.23■□□□□ 0.19
MBD4-203ENST00000429544 ZNF689Q96CS4 500 aaPredicted RBP16.23■□□□□ 0.19
MBD4-203ENST00000429544 ZBED2Q9BTP6 218 aa16.23■□□□□ 0.19
MBD4-203ENST00000429544 PCDH10Q9P2E7 1040 aa16.23■□□□□ 0.19
MBD4-203ENST00000429544 CORO1CQ9ULV4 474 aaPredicted RBP16.23■□□□□ 0.19
MBD4-203ENST00000429544 ARHGAP26Q9UNA1 814 aa16.23■□□□□ 0.19
MBD4-203ENST00000429544 INSL5Q9Y5Q6 135 aa16.23■□□□□ 0.19
MBD4-203ENST00000429544 H0Y626 953 aa16.23■□□□□ 0.19
MBD4-203ENST00000429544 SDHDO14521 159 aa16.23■□□□□ 0.19
MBD4-203ENST00000429544 PPARGP37231 505 aaPredicted RBP16.23■□□□□ 0.19
MBD4-203ENST00000429544 SLC26A3P40879 764 aa16.23■□□□□ 0.19
MBD4-203ENST00000429544 EPHB3P54753 998 aa16.23■□□□□ 0.19
MBD4-203ENST00000429544 ACTR3P61158 418 aa16.23■□□□□ 0.19
MBD4-203ENST00000429544 TYSND1Q2T9J0 566 aa16.23■□□□□ 0.19
MBD4-203ENST00000429544 ISCA2Q86U28 154 aa16.23■□□□□ 0.19
MBD4-203ENST00000429544 SLC22A9Q8IVM8 553 aa16.23■□□□□ 0.19
MBD4-203ENST00000429544 EFHBQ8N7U6 833 aa16.23■□□□□ 0.19
MBD4-203ENST00000429544 GIMAP7Q8NHV1 300 aa16.23■□□□□ 0.19
MBD4-203ENST00000429544 STON2Q8WXE9 905 aa16.23■□□□□ 0.19
MBD4-203ENST00000429544 RTKNQ9BST9 563 aa16.23■□□□□ 0.19
MBD4-203ENST00000429544 AARSD1Q9BTE6 412 aaKnown RBP16.23■□□□□ 0.19
MBD4-203ENST00000429544 ZNF385DQ9H6B1 395 aa16.23■□□□□ 0.19
MBD4-203ENST00000429544 TNFRSF12AQ9NP84 129 aa16.23■□□□□ 0.19
MBD4-203ENST00000429544 STX18Q9P2W9 335 aaKnown RBP16.23■□□□□ 0.19
MBD4-203ENST00000429544 ARIH1Q9Y4X5 557 aaPredicted RBP16.23■□□□□ 0.19
MBD4-203ENST00000429544 WASF2Q9Y6W5 498 aa16.23■□□□□ 0.19
MBD4-203ENST00000429544 TRPC5OSA6NMA1 111 aa16.22■□□□□ 0.19
MBD4-203ENST00000429544 SORBS2O94875 1100 aaKnown RBP16.22■□□□□ 0.19
MBD4-203ENST00000429544 CD160O95971 181 aa16.22■□□□□ 0.19
MBD4-203ENST00000429544 SPATA31D3P0C874 917 aa16.22■□□□□ 0.19
MBD4-203ENST00000429544 CD1DP15813 335 aa16.22■□□□□ 0.19
MBD4-203ENST00000429544 SP100P23497 879 aaPredicted RBP16.22■□□□□ 0.19
MBD4-203ENST00000429544 PPP3CCP48454 512 aa16.22■□□□□ 0.19
MBD4-203ENST00000429544 SLC34A1Q06495 639 aa16.22■□□□□ 0.19
MBD4-203ENST00000429544 TRAF2Q12933 501 aa16.22■□□□□ 0.19
MBD4-203ENST00000429544 AFTPHQ6ULP2 937 aa16.22■□□□□ 0.19
MBD4-203ENST00000429544 SPATA31D4Q6ZUB0 917 aa16.22■□□□□ 0.19
MBD4-203ENST00000429544 CUZD1Q86UP6 607 aa16.22■□□□□ 0.19
MBD4-203ENST00000429544 ARL14EPQ8N8R7 260 aaPredicted RBP16.22■□□□□ 0.19
MBD4-203ENST00000429544 ACTRT2Q8TDY3 377 aa16.22■□□□□ 0.19
MBD4-203ENST00000429544 BHMTQ93088 406 aa16.22■□□□□ 0.19
MBD4-203ENST00000429544 EML4Q9HC35 981 aaKnown RBP16.22■□□□□ 0.19
MBD4-203ENST00000429544 SPG21Q9NZD8 308 aa16.22■□□□□ 0.19
MBD4-203ENST00000429544 KIAA1671Q9BY89 1806 aa16.22■□□□□ 0.19
MBD4-203ENST00000429544 SNUPNO95149 360 aaKnown RBP16.22■□□□□ 0.19
MBD4-203ENST00000429544 CDC25CP30307 473 aa16.22■□□□□ 0.19
MBD4-203ENST00000429544 ABL2P42684 1182 aa16.22■□□□□ 0.19
MBD4-203ENST00000429544 PDAP1Q13442 181 aaKnown RBP16.22■□□□□ 0.19
MBD4-203ENST00000429544 TXNDC8Q6A555 127 aa16.22■□□□□ 0.19
MBD4-203ENST00000429544 MYLK4Q86YV6 388 aaPredicted RBP16.22■□□□□ 0.19
MBD4-203ENST00000429544 CPSF7Q8N684 471 aaKnown RBP16.22■□□□□ 0.19
MBD4-203ENST00000429544 EFCAB3Q8N7B9 438 aa16.22■□□□□ 0.19
MBD4-203ENST00000429544 NRG4Q8WWG1 115 aa16.22■□□□□ 0.19
MBD4-203ENST00000429544 GSTO2Q9H4Y5 243 aa16.22■□□□□ 0.19
MBD4-203ENST00000429544 RC3H2Q9HBD1 1191 aaKnown RBP16.22■□□□□ 0.19
MBD4-203ENST00000429544 INTS10Q9NVR2 710 aaKnown RBP16.22■□□□□ 0.19
MBD4-203ENST00000429544 CDH22Q9UJ99 828 aa16.22■□□□□ 0.19
MBD4-203ENST00000429544 C2orf81A6NN90 581 aa16.21■□□□□ 0.19
MBD4-203ENST00000429544 CCNT2O60583 730 aaKnown RBP16.21■□□□□ 0.19
MBD4-203ENST00000429544 THRAP10827 490 aa16.21■□□□□ 0.19
MBD4-203ENST00000429544 ZNF37AP17032 561 aaPredicted RBP16.21■□□□□ 0.19
MBD4-203ENST00000429544 HOXB8P17481 243 aaPredicted RBP16.21■□□□□ 0.19
MBD4-203ENST00000429544 LAG3P18627 525 aa16.21■□□□□ 0.19
MBD4-203ENST00000429544 CES1P23141 567 aa16.21■□□□□ 0.19
MBD4-203ENST00000429544 FMO4P31512 558 aa16.21■□□□□ 0.19
MBD4-203ENST00000429544 SUOXP51687 545 aa16.21■□□□□ 0.19
MBD4-203ENST00000429544 BTKQ06187 659 aa16.21■□□□□ 0.19
MBD4-203ENST00000429544 TBL3Q12788 808 aaKnown RBP16.21■□□□□ 0.19
MBD4-203ENST00000429544 ILF2Q12905 390 aaKnown RBP16.21■□□□□ 0.19
MBD4-203ENST00000429544 PTPRRQ15256 657 aa16.21■□□□□ 0.19
MBD4-203ENST00000429544 FAM219BQ5XKK7 198 aa16.21■□□□□ 0.19
MBD4-203ENST00000429544 TCEAL8Q8IYN2 117 aa16.21■□□□□ 0.19
MBD4-203ENST00000429544 ADAMTS19Q8TE59 1207 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms