RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 FGF3P11487 239 aaPredicted RBP18.33■□□□□ 0.52
UPK3BP1-201ENST00000428678 MYCLP1P12525 358 aaPredicted RBP18.33■□□□□ 0.52
UPK3BP1-201ENST00000428678 GM2AP17900 193 aa18.33■□□□□ 0.52
UPK3BP1-201ENST00000428678 EEF1GP26641 437 aaKnown RBP18.33■□□□□ 0.52
UPK3BP1-201ENST00000428678 AIF1P55008 147 aa18.33■□□□□ 0.52
UPK3BP1-201ENST00000428678 JAM2P57087 298 aa18.33■□□□□ 0.52
UPK3BP1-201ENST00000428678 KCNAB2Q13303 367 aa18.33■□□□□ 0.52
UPK3BP1-201ENST00000428678 CLPPQ16740 277 aaPredicted RBP18.33■□□□□ 0.52
UPK3BP1-201ENST00000428678 NRROSQ86YC3 692 aa18.33■□□□□ 0.52
UPK3BP1-201ENST00000428678 PHF13Q86YI8 300 aaPredicted RBP18.33■□□□□ 0.52
UPK3BP1-201ENST00000428678 CCDC112Q8NEF3 446 aa18.33■□□□□ 0.52
UPK3BP1-201ENST00000428678 ZNF564Q8TBZ8 553 aaPredicted RBP18.33■□□□□ 0.52
UPK3BP1-201ENST00000428678 NUS1Q96E22 293 aa18.33■□□□□ 0.52
UPK3BP1-201ENST00000428678 CNPY3Q9BT09 278 aa18.33■□□□□ 0.52
UPK3BP1-201ENST00000428678 SLC39A8Q9C0K1 460 aa18.33■□□□□ 0.52
UPK3BP1-201ENST00000428678 VPS16Q9H269 839 aa18.33■□□□□ 0.52
UPK3BP1-201ENST00000428678 PHPT1Q9NRX4 125 aaPredicted RBP18.33■□□□□ 0.52
UPK3BP1-201ENST00000428678 GPATCH2LQ9NWQ4 482 aa18.33■□□□□ 0.52
UPK3BP1-201ENST00000428678 TAAR2Q9P1P5 351 aa18.33■□□□□ 0.52
UPK3BP1-201ENST00000428678 UTP20O75691 2785 aaKnown RBP18.33■□□□□ 0.52
UPK3BP1-201ENST00000428678 LIFP15018 202 aa18.32■□□□□ 0.52
UPK3BP1-201ENST00000428678 AK4P27144 223 aaPredicted RBP18.32■□□□□ 0.52
UPK3BP1-201ENST00000428678 CD1CP29017 333 aa18.32■□□□□ 0.52
UPK3BP1-201ENST00000428678 HTR7P34969 479 aa18.32■□□□□ 0.52
UPK3BP1-201ENST00000428678 GNPDA1P46926 289 aa18.32■□□□□ 0.52
UPK3BP1-201ENST00000428678 ARSDP51689 593 aa18.32■□□□□ 0.52
UPK3BP1-201ENST00000428678 POLE2P56282 527 aa18.32■□□□□ 0.52
UPK3BP1-201ENST00000428678 RPL7AP62424 266 aaKnown RBP18.32■□□□□ 0.52
UPK3BP1-201ENST00000428678 NR1D2Q14995 579 aa18.32■□□□□ 0.52
UPK3BP1-201ENST00000428678 SYCP1Q15431 976 aa18.32■□□□□ 0.52
UPK3BP1-201ENST00000428678 SLC30A9Q6PML9 568 aa18.32■□□□□ 0.52
UPK3BP1-201ENST00000428678 HEATR4Q86WZ0 1026 aa18.32■□□□□ 0.52
UPK3BP1-201ENST00000428678 C17orf82Q86X59 251 aaPredicted RBP18.32■□□□□ 0.52
UPK3BP1-201ENST00000428678 AGBL5Q8NDL9 886 aa18.32■□□□□ 0.52
UPK3BP1-201ENST00000428678 PATE1Q8WXA2 126 aa18.32■□□□□ 0.52
UPK3BP1-201ENST00000428678 ART4Q93070 314 aa18.32■□□□□ 0.52
UPK3BP1-201ENST00000428678 SP110Q9HB58 689 aa18.32■□□□□ 0.52
UPK3BP1-201ENST00000428678 ANKMY1Q9P2S6 941 aa18.32■□□□□ 0.52
UPK3BP1-201ENST00000428678 B4GALT6Q9UBX8 382 aa18.32■□□□□ 0.52
UPK3BP1-201ENST00000428678 PCDHGA3Q9Y5H0 932 aa18.32■□□□□ 0.52
UPK3BP1-201ENST00000428678 USP9XQ93008 2570 aaPredicted RBP18.32■□□□□ 0.52
UPK3BP1-201ENST00000428678 SPTBN1Q01082 2364 aaKnown RBP18.31■□□□□ 0.52
UPK3BP1-201ENST00000428678 EPHB6O15197 1021 aa18.31■□□□□ 0.52
UPK3BP1-201ENST00000428678 CEACAM5P06731 702 aa18.31■□□□□ 0.52
UPK3BP1-201ENST00000428678 DESP17661 470 aa18.31■□□□□ 0.52
UPK3BP1-201ENST00000428678 CSTF2P33240 577 aaKnown RBP eCLIP18.31■□□□□ 0.52
UPK3BP1-201ENST00000428678 UGT1A3P35503 534 aa18.31■□□□□ 0.52
UPK3BP1-201ENST00000428678 SCNN1BP51168 640 aa18.31■□□□□ 0.52
UPK3BP1-201ENST00000428678 LIMK2P53671 638 aa18.31■□□□□ 0.52
UPK3BP1-201ENST00000428678 TRA2AQ13595 282 aaKnown RBP eCLIP18.31■□□□□ 0.52
UPK3BP1-201ENST00000428678 SKIDA1Q1XH10 827 aa18.31■□□□□ 0.52
UPK3BP1-201ENST00000428678 NKAIN2Q5VXU1 208 aa18.31■□□□□ 0.52
UPK3BP1-201ENST00000428678 DENND2CQ68D51 928 aa18.31■□□□□ 0.52
UPK3BP1-201ENST00000428678 DCUN1D2Q6PH85 259 aa18.31■□□□□ 0.52
UPK3BP1-201ENST00000428678 MON1BQ7L1V2 547 aa18.31■□□□□ 0.52
UPK3BP1-201ENST00000428678 CACNA2D3Q8IZS8 1091 aa18.31■□□□□ 0.52
UPK3BP1-201ENST00000428678 COQ10AQ96MF6 247 aa18.31■□□□□ 0.52
UPK3BP1-201ENST00000428678 ZMYND15Q9H091 742 aa18.31■□□□□ 0.52
UPK3BP1-201ENST00000428678 EPN3Q9H201 632 aa18.31■□□□□ 0.52
UPK3BP1-201ENST00000428678 TRNAU1APQ9NX07 287 aaKnown RBP18.31■□□□□ 0.52
UPK3BP1-201ENST00000428678 B3GALT1Q9Y5Z6 326 aa18.31■□□□□ 0.52
UPK3BP1-201ENST00000428678 NOTCH2Q04721 2471 aa18.3■□□□□ 0.52
UPK3BP1-201ENST00000428678 RP1L1Q8IWN7 2480 aaPredicted RBP18.3■□□□□ 0.52
UPK3BP1-201ENST00000428678 GOLGA6CA6NDK9 693 aa18.3■□□□□ 0.52
UPK3BP1-201ENST00000428678 GOLGA6BA6NDN3 693 aa18.3■□□□□ 0.52
UPK3BP1-201ENST00000428678 DFFAO00273 331 aa18.3■□□□□ 0.52
UPK3BP1-201ENST00000428678 EEF2KO00418 725 aaKnown RBP18.3■□□□□ 0.52
UPK3BP1-201ENST00000428678 TRAFD1O14545 582 aaPredicted RBP18.3■□□□□ 0.52
UPK3BP1-201ENST00000428678 DAPK3O43293 454 aa18.3■□□□□ 0.52
UPK3BP1-201ENST00000428678 GOLGA6DP0CG33 693 aa18.3■□□□□ 0.52
UPK3BP1-201ENST00000428678 MPSTP25325 297 aa18.3■□□□□ 0.52
UPK3BP1-201ENST00000428678 GPR3P46089 330 aa18.3■□□□□ 0.52
UPK3BP1-201ENST00000428678 CCR10P46092 362 aa18.3■□□□□ 0.52
UPK3BP1-201ENST00000428678 AP1S1P61966 158 aa18.3■□□□□ 0.52
UPK3BP1-201ENST00000428678 FAM129CQ86XR2 697 aa18.3■□□□□ 0.52
UPK3BP1-201ENST00000428678 OR4D9Q8NGE8 314 aa18.3■□□□□ 0.52
UPK3BP1-201ENST00000428678 FRMD8Q9BZ67 464 aaPredicted RBP18.3■□□□□ 0.52
UPK3BP1-201ENST00000428678 CDH19Q9H159 772 aa18.3■□□□□ 0.52
UPK3BP1-201ENST00000428678 CLSTN2Q9H4D0 955 aa18.3■□□□□ 0.52
UPK3BP1-201ENST00000428678 DHX35Q9H5Z1 703 aaKnown RBP18.3■□□□□ 0.52
UPK3BP1-201ENST00000428678 SLC39A1Q9NY26 324 aa18.3■□□□□ 0.52
UPK3BP1-201ENST00000428678 GOLGA6AQ9NYA3 693 aa18.3■□□□□ 0.52
UPK3BP1-201ENST00000428678 SUFUQ9UMX1 484 aa18.3■□□□□ 0.52
UPK3BP1-201ENST00000428678 AP4E1Q9UPM8 1137 aa18.3■□□□□ 0.52
UPK3BP1-201ENST00000428678 TCRBV5S1A1TA0A578 114 aa18.29■□□□□ 0.52
UPK3BP1-201ENST00000428678 ZNF891A8MT65 544 aaPredicted RBP18.29■□□□□ 0.52
UPK3BP1-201ENST00000428678 FUCA1P04066 466 aa18.29■□□□□ 0.52
UPK3BP1-201ENST00000428678 CSF2RBP32927 897 aa18.29■□□□□ 0.52
UPK3BP1-201ENST00000428678 PPM1FP49593 454 aaPredicted RBP18.29■□□□□ 0.52
UPK3BP1-201ENST00000428678 CTBSQ01459 385 aa18.29■□□□□ 0.52
UPK3BP1-201ENST00000428678 NSUN2Q08J23 767 aaKnown RBP eCLIP18.29■□□□□ 0.52
UPK3BP1-201ENST00000428678 UBAP2LQ14157 1087 aaKnown RBP18.29■□□□□ 0.52
UPK3BP1-201ENST00000428678 RFTN1Q14699 578 aaPredicted RBP18.29■□□□□ 0.52
UPK3BP1-201ENST00000428678 CNGA3Q16281 694 aa18.29■□□□□ 0.52
UPK3BP1-201ENST00000428678 FKBP15Q5T1M5 1219 aa18.29■□□□□ 0.52
UPK3BP1-201ENST00000428678 ARHGAP36Q6ZRI8 547 aa18.29■□□□□ 0.52
UPK3BP1-201ENST00000428678 ARHGAP12Q8IWW6 846 aa18.29■□□□□ 0.52
UPK3BP1-201ENST00000428678 PDCD6IPQ8WUM4 868 aaKnown RBP18.29■□□□□ 0.52
UPK3BP1-201ENST00000428678 PTCD2Q8WV60 388 aaKnown RBP18.29■□□□□ 0.52
UPK3BP1-201ENST00000428678 NSMCE3Q96MG7 304 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms