RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 AMACRQ9UHK6 382 aa14.89□□□□□ -0.03
RTN4-210ENST00000427710 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.89□□□□□ -0.03
RTN4-210ENST00000427710 CACNA1BQ00975 2339 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 A0A0J9YYE9 177 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 FAM149AA5PLN7 773 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 GOLGA6L6A8MZA4 724 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 C1QTNF9BB2RNN3 333 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 H3BM21 787 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 TRIM16O95361 564 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 FTCDO95954 541 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 TRBC1P01850 177 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 C1SP09871 688 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 C1QTNF9P0C862 333 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 CTNNA2P26232 953 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 ACADVLP49748 655 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 PEX5P50542 639 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 ZNF211Q13398 564 aaPredicted RBP14.88□□□□□ -0.03
RTN4-210ENST00000427710 MTM1Q13496 603 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 PCSK7Q16549 785 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 QPCTQ16769 361 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 PROX2Q3B8N5 592 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 PRRT3Q5FWE3 981 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 LRRC66Q68CR7 880 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 PNCKQ6P2M8 343 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 Q6ZVL8 140 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 NT5DC3Q86UY8 548 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 OR4C6Q8NH72 309 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 SPATA22Q8NHS9 363 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 TFB1MQ8WVM0 346 aaKnown RBP14.88□□□□□ -0.03
RTN4-210ENST00000427710 SPOCK2Q92563 424 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 ALG3Q92685 438 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 P3H4Q92791 437 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 DTD2Q96FN9 168 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 LRRC61Q9BV99 259 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 LGR4Q9BXB1 951 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 CLPBQ9H078 707 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 SUDS3Q9H7L9 328 aaPredicted RBP14.88□□□□□ -0.03
RTN4-210ENST00000427710 GLOD4Q9HC38 313 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 MRPL40Q9NQ50 206 aaKnown RBP14.88□□□□□ -0.03
RTN4-210ENST00000427710 UBP1Q9NZI7 540 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 PPIL1Q9Y3C6 166 aa14.88□□□□□ -0.03
RTN4-210ENST00000427710 TMEM202A6NGA9 273 aa14.87□□□□□ -0.03
RTN4-210ENST00000427710 AQP9O43315 295 aa14.87□□□□□ -0.03
RTN4-210ENST00000427710 DKK1O94907 266 aa14.87□□□□□ -0.03
RTN4-210ENST00000427710 CLDN7O95471 211 aa14.87□□□□□ -0.03
RTN4-210ENST00000427710 MT-CYBP00156 380 aaPredicted RBP14.87□□□□□ -0.03
RTN4-210ENST00000427710 PIRTP0C851 137 aa14.87□□□□□ -0.03
RTN4-210ENST00000427710 PYGMP11217 842 aa14.87□□□□□ -0.03
RTN4-210ENST00000427710 CES1P23141 567 aa14.87□□□□□ -0.03
RTN4-210ENST00000427710 CD68P34810 354 aaPredicted RBP14.87□□□□□ -0.03
RTN4-210ENST00000427710 NR2C2P49116 596 aa14.87□□□□□ -0.03
RTN4-210ENST00000427710 DAB2P98082 770 aa14.87□□□□□ -0.03
RTN4-210ENST00000427710 PPARDQ03181 441 aa14.87□□□□□ -0.03
RTN4-210ENST00000427710 PTSQ03393 145 aa14.87□□□□□ -0.03
RTN4-210ENST00000427710 WASHC5Q12768 1159 aa14.87□□□□□ -0.03
RTN4-210ENST00000427710 KIF5AQ12840 1032 aa14.87□□□□□ -0.03
RTN4-210ENST00000427710 PPP2R5EQ16537 467 aa14.87□□□□□ -0.03
RTN4-210ENST00000427710 TEX44Q53QW1 395 aa14.87□□□□□ -0.03
RTN4-210ENST00000427710 BBS12Q6ZW61 710 aa14.87□□□□□ -0.03
RTN4-210ENST00000427710 CBARPQ8N350 705 aaPredicted RBP14.87□□□□□ -0.03
RTN4-210ENST00000427710 OR1E3Q8WZA6 343 aa14.87□□□□□ -0.03
RTN4-210ENST00000427710 PDXPQ96GD0 296 aa14.87□□□□□ -0.03
RTN4-210ENST00000427710 APOLD1Q96LR9 279 aa14.87□□□□□ -0.03
RTN4-210ENST00000427710 WDR92Q96MX6 357 aa14.87□□□□□ -0.03
RTN4-210ENST00000427710 OSBPL8Q9BZF1 889 aa14.87□□□□□ -0.03
RTN4-210ENST00000427710 ABCG8Q9H221 673 aa14.87□□□□□ -0.03
RTN4-210ENST00000427710 HAUS2Q9NVX0 235 aa14.87□□□□□ -0.03
RTN4-210ENST00000427710 KLQ9UEF7 1012 aa14.87□□□□□ -0.03
RTN4-210ENST00000427710 MOSPD1Q9UJG1 213 aa14.87□□□□□ -0.03
RTN4-210ENST00000427710 AMFRQ9UKV5 643 aa14.87□□□□□ -0.03
RTN4-210ENST00000427710 CAPN6Q9Y6Q1 641 aa14.87□□□□□ -0.03
RTN4-210ENST00000427710 ACACAQ13085 2346 aa14.87□□□□□ -0.03
RTN4-210ENST00000427710 EPG5Q9HCE0 2579 aa14.86□□□□□ -0.03
RTN4-210ENST00000427710 LY6G6EA0A0G2JKS1 128 aa14.86□□□□□ -0.03
RTN4-210ENST00000427710 CAPN8A6NHC0 703 aa14.86□□□□□ -0.03
RTN4-210ENST00000427710 H7C0C1 242 aa14.86□□□□□ -0.03
RTN4-210ENST00000427710 CACNB4O00305 520 aaPredicted RBP14.86□□□□□ -0.03
RTN4-210ENST00000427710 TOR1BO14657 336 aa14.86□□□□□ -0.03
RTN4-210ENST00000427710 DDX3YO15523 660 aaKnown RBP14.86□□□□□ -0.03
RTN4-210ENST00000427710 PMPCBO75439 489 aa14.86□□□□□ -0.03
RTN4-210ENST00000427710 RFPL3O75679 317 aa14.86□□□□□ -0.03
RTN4-210ENST00000427710 TSHRP16473 764 aa14.86□□□□□ -0.03
RTN4-210ENST00000427710 CKMT2P17540 419 aa14.86□□□□□ -0.03
RTN4-210ENST00000427710 NFKBIAP25963 317 aa14.86□□□□□ -0.03
RTN4-210ENST00000427710 ATP5OP48047 213 aa14.86□□□□□ -0.03
RTN4-210ENST00000427710 RWDD2BP57060 319 aa14.86□□□□□ -0.03
RTN4-210ENST00000427710 GSDMDP57764 484 aa14.86□□□□□ -0.03
RTN4-210ENST00000427710 SRP54P61011 504 aaKnown RBP14.86□□□□□ -0.03
RTN4-210ENST00000427710 OTUD4Q01804 1114 aaKnown RBP14.86□□□□□ -0.03
RTN4-210ENST00000427710 HS1BP3Q53T59 392 aa14.86□□□□□ -0.03
RTN4-210ENST00000427710 CCDC181Q5TID7 509 aa14.86□□□□□ -0.03
RTN4-210ENST00000427710 RAET1GQ6H3X3 334 aa14.86□□□□□ -0.03
RTN4-210ENST00000427710 ESRP1Q6NXG1 681 aaKnown RBP14.86□□□□□ -0.03
RTN4-210ENST00000427710 BZW1Q7L1Q6 419 aaKnown RBP14.86□□□□□ -0.03
RTN4-210ENST00000427710 PEX26Q7Z412 305 aa14.86□□□□□ -0.03
RTN4-210ENST00000427710 TECPR1Q7Z6L1 1165 aa14.86□□□□□ -0.03
RTN4-210ENST00000427710 NDUFAF2Q8N183 169 aa14.86□□□□□ -0.03
RTN4-210ENST00000427710 SCAMP4Q969E2 229 aa14.86□□□□□ -0.03
RTN4-210ENST00000427710 IMP4Q96G21 291 aaKnown RBP14.86□□□□□ -0.03
RTN4-210ENST00000427710 QKIQ96PU8 341 aaKnown RBP eCLIP14.86□□□□□ -0.033e-17■■■■■ 90
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms