RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 PI4KAP42356 2102 aa13.25□□□□□ -0.29
HLA-DMB-258ENST00000418107 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 MUSKO15146 869 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 INSIG1O15503 277 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 ZMPSTE24O75844 475 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 MMP2P08253 660 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 KRT15P19012 456 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 NR1D1P20393 614 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 ADRA1AP35348 466 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 DPP6P42658 865 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 TNFRSF4P43489 277 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 SERPINH1P50454 418 aaKnown RBP13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 GYS2P54840 703 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 RPL6Q02878 288 aaKnown RBP13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 CDK18Q07002 472 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 POU6F1Q14863 301 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 CRYMQ14894 314 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 MYLKQ15746 1914 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 PLEKHG6Q3KR16 790 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 KBTBD12Q3ZCT8 623 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 INO80DQ53TQ3 878 aaPredicted RBP13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 PCID2Q5JVF3 399 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 STEAP4Q687X5 459 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 ANKRD11Q6UB99 2663 aaPredicted RBP13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 CES3Q6UWW8 571 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 METTL3Q86U44 580 aaKnown RBP13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 HDDC3Q8N4P3 179 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 ARFGAP2Q8N6H7 521 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 NAT16Q8N8M0 369 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 OR2I1PQ8NGU4 316 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 ARRDC2Q8TBH0 407 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 CDKL2Q92772 493 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 ALG14Q96F25 216 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 PAFAH2Q99487 392 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 CTNNAL1Q9UBT7 734 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 SLC25A13Q9UJS0 675 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 GGA2Q9UJY4 613 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 SLC6A14Q9UN76 642 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 SOX13Q9UN79 622 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 FCF1Q9Y324 198 aaKnown RBP13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 OR51B4Q9Y5P0 310 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 FAM169AQ9Y6X4 670 aa13.24□□□□□ -0.29
HLA-DMB-258ENST00000418107 TBC1D3BA6NDS4 549 aa13.23□□□□□ -0.29
HLA-DMB-258ENST00000418107 UPK3BL1B0FP48 263 aa13.23□□□□□ -0.29
HLA-DMB-258ENST00000418107 UPK3BL2E5RIL1 263 aa13.23□□□□□ -0.29
HLA-DMB-258ENST00000418107 PIAS1O75925 651 aa13.23□□□□□ -0.29
HLA-DMB-258ENST00000418107 PENKP01210 267 aaPredicted RBP13.23□□□□□ -0.29
HLA-DMB-258ENST00000418107 PABPC1P11940 636 aaKnown RBP13.23□□□□□ -0.29
HLA-DMB-258ENST00000418107 GABRG2P18507 467 aa13.23□□□□□ -0.29
HLA-DMB-258ENST00000418107 CA4P22748 312 aa13.23□□□□□ -0.29
HLA-DMB-258ENST00000418107 HOXD12P35452 270 aa13.23□□□□□ -0.29
HLA-DMB-258ENST00000418107 WASP42768 502 aa13.23□□□□□ -0.29
HLA-DMB-258ENST00000418107 PLK1P53350 603 aa13.23□□□□□ -0.29
HLA-DMB-258ENST00000418107 SLC20A2Q08357 652 aa13.23□□□□□ -0.29
HLA-DMB-258ENST00000418107 DUOXA1Q1HG43 343 aa13.23□□□□□ -0.29
HLA-DMB-258ENST00000418107 PITRM1Q5JRX3 1037 aa13.23□□□□□ -0.29
HLA-DMB-258ENST00000418107 LGSNQ5TDP6 509 aa13.23□□□□□ -0.29
HLA-DMB-258ENST00000418107 RANBP10Q6VN20 620 aa13.23□□□□□ -0.29
HLA-DMB-258ENST00000418107 LRRC6Q86X45 466 aa13.23□□□□□ -0.29
HLA-DMB-258ENST00000418107 TDRPQ86YL5 185 aa13.23□□□□□ -0.29
HLA-DMB-258ENST00000418107 ETFBKMTQ8IXQ9 262 aa13.23□□□□□ -0.29
HLA-DMB-258ENST00000418107 RYBPQ8N488 228 aaPredicted RBP13.23□□□□□ -0.29
HLA-DMB-258ENST00000418107 CHCHD4Q8N4Q1 142 aa13.23□□□□□ -0.29
HLA-DMB-258ENST00000418107 ZNF513Q8N8E2 541 aaPredicted RBP13.23□□□□□ -0.29
HLA-DMB-258ENST00000418107 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.23□□□□□ -0.29
HLA-DMB-258ENST00000418107 TLCD1Q96CP7 247 aa13.23□□□□□ -0.29
HLA-DMB-258ENST00000418107 FEM1CQ96JP0 617 aa13.23□□□□□ -0.29
HLA-DMB-258ENST00000418107 NUDCD1Q96RS6 583 aa13.23□□□□□ -0.29
HLA-DMB-258ENST00000418107 SELENOSQ9BQE4 189 aa13.23□□□□□ -0.29
HLA-DMB-258ENST00000418107 TRIM56Q9BRZ2 755 aaKnown RBP13.23□□□□□ -0.29
HLA-DMB-258ENST00000418107 NOD2Q9HC29 1040 aa13.23□□□□□ -0.29
HLA-DMB-258ENST00000418107 FETUBQ9UGM5 382 aa13.23□□□□□ -0.29
HLA-DMB-258ENST00000418107 LGALS13Q9UHV8 139 aa13.23□□□□□ -0.29
HLA-DMB-258ENST00000418107 LAMA5O15230 3695 aa13.23□□□□□ -0.29
HLA-DMB-258ENST00000418107 PLXND1Q9Y4D7 1925 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 IQANK1A0A1B0GTG1 560 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 FAM237BA0A1B0GVD1 139 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 CCDC78A2IDD5 438 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 TRIM24O15164 1050 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 TULP3O75386 442 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 GJB3O75712 270 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 USP1O94782 785 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 FGF1P05230 155 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 POLR2EP19388 210 aaKnown RBP13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 HLA-DPA1P20036 260 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 ADRA1DP25100 572 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 CHRNA4P43681 627 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 ATP1A2P50993 1020 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 PPP2R2AP63151 447 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 SULT2A1Q06520 285 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 SLC1A5Q15758 541 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 SLC14A2Q15849 920 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 ACCSLQ4AC99 568 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 ANKRD20A4Q4UJ75 823 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 SIRPB2Q5JXA9 342 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 ALG1LQ6GMV1 187 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 DENND5AQ6IQ26 1287 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 TRMT10BQ6PF06 316 aaKnown RBP13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 SRLQ86TD4 932 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 MINDY1Q8N5J2 469 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms