RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 PPM1JQ5JR12 505 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 TOR2AQ5JU69 321 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 GLRA4Q5JXX5 417 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 REP15Q6BDI9 236 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 DARS2Q6PI48 645 aaKnown RBP6.4□□□□□ -1.38
CCNT1-202ENST00000417344 SPATC1Q76KD6 591 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 WDR49Q8IV35 697 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 HID1Q8IV36 788 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 DNAJC10Q8IXB1 793 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 AQP12AQ8IXF9 295 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 THNSL1Q8IYQ7 743 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 UNC5BQ8IZJ1 945 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 LHFPL5Q8TAF8 219 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 SPATA18Q8TC71 538 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 POMGNT1Q8WZA1 660 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 SGCDQ92629 289 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 GTF2H4Q92759 462 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 LENG9Q96B70 501 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 SH3KBP1Q96B97 665 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 NXNL1Q96CM4 212 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 GIMAP5Q96F15 307 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 CCDC120Q96HB5 630 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 RNF170Q96K19 258 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 ACCSQ96QU6 501 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 CPXM1Q96SM3 734 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 EBNA1BP2Q99848 306 aaKnown RBP6.4□□□□□ -1.38
CCNT1-202ENST00000417344 HSD17B14Q9BPX1 270 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 ZNF577Q9BSK1 485 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 SLIRPQ9GZT3 109 aaKnown RBP6.4□□□□□ -1.38
CCNT1-202ENST00000417344 MIR1-1HGQ9H1L0 117 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 EHMT1Q9H9B1 1298 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 TUFT1Q9NNX1 390 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 HPS4Q9NQG7 708 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 PAK5Q9P286 719 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 FBXO5Q9UKT4 447 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 RAP2CQ9Y3L5 183 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 PCDHA11Q9Y5I1 949 aa6.4□□□□□ -1.38
CCNT1-202ENST00000417344 COL24A1Q17RW2 1714 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 ARPC4-TTLL3A0A0A6YYG9 625 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 A8MV72 311 aaPredicted RBP6.4□□□□□ -1.39
CCNT1-202ENST00000417344 ZNF99A8MXY4 864 aaPredicted RBP6.4□□□□□ -1.39
CCNT1-202ENST00000417344 FAM86B1E9PN63 330 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 SLCO1B7G3V0H7 640 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 PLK4O00444 970 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 CTDSP2O14595 271 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 ZBTB5O15062 677 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 MSH4O15457 936 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 GRID2O43424 1007 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 TRIM13O60858 407 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 NOS1APO75052 506 aaPredicted RBP6.4□□□□□ -1.39
CCNT1-202ENST00000417344 SLITRK5O94991 958 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 STARD3NLO95772 234 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 CHRNA1P02708 482 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 CHRNGP07510 517 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 APRTP07741 180 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 HTR1AP08908 422 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 FAM86B2P0C5J1 330 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 SNHG28P0DPA3 235 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 CYP2A7P20853 494 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 KDELR1P24390 212 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 CCNCP24863 283 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 IL1R2P27930 398 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 ALDH4A1P30038 563 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 SHMT2P34897 504 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 SERPINH1P50454 418 aaKnown RBP6.4□□□□□ -1.39
CCNT1-202ENST00000417344 DEFA1P59665 94 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 DEFA3P59666 94 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 GABARAPL2P60520 117 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 VBP1P61758 197 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 LSM3P62310 102 aaKnown RBP6.4□□□□□ -1.39
CCNT1-202ENST00000417344 GBE1Q04446 702 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 SMARCB1Q12824 385 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 PDK2Q15119 407 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 MAPRE2Q15555 327 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 SNRNP35Q16560 246 aaKnown RBP6.4□□□□□ -1.39
CCNT1-202ENST00000417344 SMTNL2Q2TAL5 461 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 COLEC12Q5KU26 742 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 SHEQ5VZ18 495 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 SYCE2Q6PIF2 218 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 C15orf52Q6ZUT6 534 aaKnown RBP6.4□□□□□ -1.39
CCNT1-202ENST00000417344 C16orf86Q6ZW13 317 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 TAS1R3Q7RTX0 852 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 PRSS48Q7RTY5 328 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 NOXA1Q86UR1 476 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 RFX6Q8HWS3 928 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 RIOX2Q8IUF8 465 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 SPPL2CQ8IUH8 684 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 ZNF295-AS1Q8N0V1 137 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 ABRAQ8N0Z2 381 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 FAM83FQ8NEG4 500 aaPredicted RBP6.4□□□□□ -1.39
CCNT1-202ENST00000417344 OR10Z1Q8NGY1 313 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 LRRC20Q8TCA0 184 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 SLC2A14Q8TDB8 520 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 SLC22A17Q8WUG5 538 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 CRYGNQ8WXF5 182 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 HDAC2Q92769 488 aaKnown RBP6.4□□□□□ -1.39
CCNT1-202ENST00000417344 SNAPC3Q92966 411 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 HDAC10Q969S8 669 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 MYRFLQ96LU7 910 aa6.4□□□□□ -1.39
CCNT1-202ENST00000417344 HEXIM2Q96MH2 286 aaKnown RBP6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms