RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 PANX3Q96QZ0 392 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 CCDC59Q9P031 241 aaKnown RBP12.06□□□□□ -0.48
UBR4-205ENST00000417040 SLC28A2O43868 658 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 NTSP30990 170 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 MYBPC1Q00872 1141 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 FAM151BQ6UXP7 276 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 ANKRD13AQ8IZ07 590 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 POF1BQ8WVV4 589 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 TAMM41Q96BW9 452 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 KREMEN1Q96MU8 473 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 PORCNQ9H237 461 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 RPTORQ8N122 1335 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 ATP6V1G1O75348 118 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 STX11O75558 287 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 SERPINA1P01009 418 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 RPS6KA3P51812 740 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 POLR2JP52435 117 aaKnown RBP12.05□□□□□ -0.48
UBR4-205ENST00000417040 CEBPGP53567 150 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 GTF2BQ00403 316 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 CA9Q16790 459 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 STYK1Q6J9G0 422 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 FAM220AQ7Z4H9 259 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 KIAA0319LQ8IZA0 1049 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 CYP4X1Q8N118 509 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 NKAPQ8N5F7 415 aaKnown RBP12.05□□□□□ -0.48
UBR4-205ENST00000417040 LZTR1Q8N653 840 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 NAT16Q8N8M0 369 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 SENP8Q96LD8 212 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 PPP3R2Q96LZ3 170 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 VAT1Q99536 393 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 SEMA3CQ99985 751 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 ABCC13Q9NSE7 274 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 PXDNQ92626 1479 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 CD163L1Q9NR16 1453 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 RLN1P04808 185 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 MPP1Q00013 466 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 RIPK1Q13546 671 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 MFSD10Q14728 455 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 PALB2Q86YC2 1186 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 OR8H3Q8N146 312 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 OR6K2Q8NGY2 324 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 TEX47Q8TBZ9 253 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 LPPQ93052 612 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 LENG8Q96PV6 779 aaPredicted RBP12.05□□□□□ -0.48
UBR4-205ENST00000417040 FEM1AQ9BSK4 669 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 ELL3Q9HB65 397 aaPredicted RBP12.05□□□□□ -0.48
UBR4-205ENST00000417040 DKK3Q9UBP4 350 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 RWDD3Q9Y3V2 267 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 FAM47E-STBD1D6RA91 191 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 MEIS2O14770 477 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 TGFB1I1O43294 461 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 UGT1A9O60656 530 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 ADCYAP1R1P41586 468 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 HGSNATQ68CP4 663 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 AFTPHQ6ULP2 937 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 RNF180Q86T96 592 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 STX12Q86Y82 276 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 RAB43Q86YS6 212 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 CHPFQ8IZ52 775 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 CLYBLQ8N0X4 340 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 SLC4A11Q8NBS3 891 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 ACMSDQ8TDX5 336 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 P2RY11Q96G91 374 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 SPATC1LQ9H0A9 340 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 UGT1A7Q9HAW7 530 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 UGT1A10Q9HAW8 530 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 UGT1A8Q9HAW9 530 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 ZNF536O15090 1300 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 CCDC162PA2VCL2 907 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 SUV39H1O43463 412 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 UGT2B11O75310 529 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 LRIG2O94898 1065 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 CCNYL3P0C7X3 344 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 POU2F1P14859 743 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 SLC9A4Q6AI14 798 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 KLHDC10Q6PID8 442 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 THAP5Q7Z6K1 395 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 C7orf57Q8NEG2 295 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 OR2T12Q8NG77 320 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 TOP1MTQ969P6 601 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 S100A13Q99584 98 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 MLPHQ9BV36 600 aaPredicted RBP12.05□□□□□ -0.48
UBR4-205ENST00000417040 MAPRE3Q9UPY8 281 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 NR2E1Q9Y466 385 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 CCL22O00626 93 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 RGL2O15211 777 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 SPATA31C1P0DKV0 1188 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.05□□□□□ -0.48
UBR4-205ENST00000417040 CCSAPQ6IQ19 270 aaPredicted RBP12.05□□□□□ -0.48
UBR4-205ENST00000417040 ANKS1BQ7Z6G8 1248 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 RASAL3Q86YV0 1011 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 RDH11Q8TC12 318 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 DIRAS2Q96HU8 199 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 ASB7Q9H672 318 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 SYNPO2Q9UMS6 1093 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 DHRS7Q9Y394 339 aa12.05□□□□□ -0.48
UBR4-205ENST00000417040 FAM172BPA6NC97 362 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 KPNA3O00505 521 aaPredicted RBP12.04□□□□□ -0.48
UBR4-205ENST00000417040 RNASEH1O60930 286 aaKnown RBP12.04□□□□□ -0.48
UBR4-205ENST00000417040 FTH1P02794 183 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms