RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 HACD1B0YJ81 288 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 CILPO75339 1184 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 TGFB3P10600 412 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 COX7A2P14406 83 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 TSHRP16473 764 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 CHRNA4P43681 627 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 ITGA7Q13683 1181 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 GPR158Q5T848 1215 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 ZNF554Q86TJ5 538 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 NT5DC4Q86YG4 428 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 CROCCP3Q8IVE0 287 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 FAM45AQ8TCE6 357 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 GINS4Q9BRT9 223 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 RASSF1Q9NS23 344 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 ANKRD6Q9Y2G4 727 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 KLRG2A4D1S0 409 aaPredicted RBP12.92□□□□□ -0.34
SCN1B-202ENST00000415950 C2CD4BA6NLJ0 364 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 SPATA31C2B4DYI2 1134 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 PSMD11O00231 422 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 GPR182O15218 404 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 TMCC2O75069 709 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 RECQL5O94762 991 aaPredicted RBP12.92□□□□□ -0.34
SCN1B-202ENST00000415950 TTKP33981 857 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 HNF4AP41235 474 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 TAS2R39P59534 338 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 IRF8Q02556 426 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 GNA12Q03113 381 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 BNIP3Q12983 259 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 TSNQ15631 228 aaKnown RBP12.92□□□□□ -0.34
SCN1B-202ENST00000415950 PTPRNQ16849 979 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 SLC27A1Q6PCB7 646 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 GALNT5Q7Z7M9 940 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 ANKRD52Q8NB46 1076 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 MCOLN3Q8TDD5 553 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 GPR152Q8TDT2 470 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 CANT1Q8WVQ1 401 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 TRIM63Q969Q1 353 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 QKIQ96PU8 341 aaKnown RBP eCLIP12.92□□□□□ -0.34
SCN1B-202ENST00000415950 TNFSF13BQ9Y275 285 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 EFR3BQ9Y2G0 817 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 MTF2Q9Y483 593 aaPredicted RBP12.92□□□□□ -0.34
SCN1B-202ENST00000415950 RP1L1Q8IWN7 2480 aaPredicted RBP12.92□□□□□ -0.34
SCN1B-202ENST00000415950 ALDH1A2O94788 518 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 JAK1P23458 1154 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 GGT5P36269 586 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 MATKP42679 507 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 ANXA11P50995 505 aaKnown RBP12.92□□□□□ -0.34
SCN1B-202ENST00000415950 CRY1Q16526 586 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 CPSF6Q16630 551 aaKnown RBP eCLIP12.92□□□□□ -0.34
SCN1B-202ENST00000415950 INO80DQ53TQ3 878 aaPredicted RBP12.92□□□□□ -0.34
SCN1B-202ENST00000415950 ARMC6Q6NXE6 501 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 OLFML1Q6UWY5 402 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 DLK2Q6UY11 383 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 ZNF671Q8TAW3 534 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 STAG3L4Q8TBR4 150 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 B3GALT6Q96L58 329 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 RMI1Q9H9A7 625 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 ARHGEF4Q9NR80 690 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 ADAMTS6Q9UKP5 1117 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 KCNH4Q9UQ05 1017 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 MYO10Q9HD67 2058 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 ARID1BQ8NFD5 2236 aaPredicted RBP12.91□□□□□ -0.34
SCN1B-202ENST00000415950 LRATO95237 230 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 PRAMEF19Q5SWL8 479 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 RETSATQ6NUM9 610 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 RD3Q7Z3Z2 195 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 CTU1Q7Z7A3 348 aaKnown RBP12.91□□□□□ -0.34
SCN1B-202ENST00000415950 DNERQ8NFT8 737 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 REXO5Q96IC2 774 aaKnown RBP12.91□□□□□ -0.34
SCN1B-202ENST00000415950 DNAAF2Q9NVR5 837 aaKnown RBP12.91□□□□□ -0.34
SCN1B-202ENST00000415950 C3orf18Q9UK00 162 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 TEX264Q9Y6I9 313 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 H3BMM5 538 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 MSI1O43347 362 aaKnown RBP12.91□□□□□ -0.34
SCN1B-202ENST00000415950 CST1P01037 141 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 LMO2P25791 158 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 RPL38P63173 70 aaKnown RBP12.91□□□□□ -0.34
SCN1B-202ENST00000415950 PTSQ03393 145 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 DRICH1Q6PGQ1 229 aaPredicted RBP12.91□□□□□ -0.34
SCN1B-202ENST00000415950 DENND1AQ8TEH3 1009 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 TM6SF2Q9BZW4 377 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 DIABLOQ9NR28 239 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.91□□□□□ -0.34
SCN1B-202ENST00000415950 GIMAP2Q9UG22 337 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 ADAM30Q9UKF2 790 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 RGS14O43566 566 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 KCNH1O95259 989 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 LGALS2P05162 132 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 ATP5BP06576 529 aaKnown RBP12.91□□□□□ -0.34
SCN1B-202ENST00000415950 CNPP09543 421 aaKnown RBP12.91□□□□□ -0.34
SCN1B-202ENST00000415950 PABPC1P11940 636 aaKnown RBP12.91□□□□□ -0.34
SCN1B-202ENST00000415950 NPR3P17342 541 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 C4BPBP20851 252 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 WNT7BP56706 349 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 KRT77Q7Z794 578 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 PNPLA1Q8N8W4 532 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 VPS35Q96QK1 796 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 FTHL17Q9BXU8 183 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 OXCT2Q9BYC2 517 aaPredicted RBP12.91□□□□□ -0.34
SCN1B-202ENST00000415950 LHX5Q9H2C1 402 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms