RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 RGRP47804 291 aa12.37□□□□□ -0.43
UBA3-203ENST00000415609 STC1P52823 247 aa12.37□□□□□ -0.43
UBA3-203ENST00000415609 GALNT1Q10472 559 aaPredicted RBP12.37□□□□□ -0.43
UBA3-203ENST00000415609 FLOT2Q14254 428 aa12.37□□□□□ -0.43
UBA3-203ENST00000415609 TRIP10Q15642 601 aa12.37□□□□□ -0.43
UBA3-203ENST00000415609 PPP1R3AQ16821 1122 aa12.37□□□□□ -0.43
UBA3-203ENST00000415609 PIGGQ5H8A4 983 aa12.37□□□□□ -0.43
UBA3-203ENST00000415609 ZNF678Q5SXM1 525 aa12.37□□□□□ -0.43
UBA3-203ENST00000415609 HECTD3Q5T447 861 aa12.37□□□□□ -0.43
UBA3-203ENST00000415609 CLEC6AQ6EIG7 209 aa12.37□□□□□ -0.43
UBA3-203ENST00000415609 GLT6D1Q7Z4J2 308 aa12.37□□□□□ -0.43
UBA3-203ENST00000415609 KBTBD6Q86V97 674 aa12.37□□□□□ -0.43
UBA3-203ENST00000415609 LRRC43Q8N309 656 aa12.37□□□□□ -0.43
UBA3-203ENST00000415609 RNF148Q8N7C7 305 aa12.37□□□□□ -0.43
UBA3-203ENST00000415609 PDZD8Q8NEN9 1154 aa12.37□□□□□ -0.43
UBA3-203ENST00000415609 GDPD5Q8WTR4 605 aa12.37□□□□□ -0.43
UBA3-203ENST00000415609 L3HYPDHQ96EM0 354 aa12.37□□□□□ -0.43
UBA3-203ENST00000415609 PSKH2Q96QS6 385 aa12.37□□□□□ -0.43
UBA3-203ENST00000415609 TRMOQ9BU70 441 aa12.37□□□□□ -0.43
UBA3-203ENST00000415609 VCXQ9H320 206 aa12.37□□□□□ -0.43
UBA3-203ENST00000415609 DLGAP2Q9P1A6 1054 aa12.37□□□□□ -0.43
UBA3-203ENST00000415609 SCOCQ9UIL1 159 aa12.37□□□□□ -0.43
UBA3-203ENST00000415609 TRAF6Q9Y4K3 522 aa12.37□□□□□ -0.43
UBA3-203ENST00000415609 SPO11Q9Y5K1 396 aa12.37□□□□□ -0.43
UBA3-203ENST00000415609 ZNF840PA6NDX5 716 aa12.36□□□□□ -0.43
UBA3-203ENST00000415609 TCAF2A6NFQ2 919 aa12.36□□□□□ -0.43
UBA3-203ENST00000415609 H3BNC9 293 aa12.36□□□□□ -0.43
UBA3-203ENST00000415609 H3BNX3 289 aa12.36□□□□□ -0.43
UBA3-203ENST00000415609 UBFD1O14562 309 aaKnown RBP12.36□□□□□ -0.43
UBA3-203ENST00000415609 UBDO15205 165 aa12.36□□□□□ -0.43
UBA3-203ENST00000415609 COCHO43405 550 aa12.36□□□□□ -0.43
UBA3-203ENST00000415609 KDELR3O43731 214 aa12.36□□□□□ -0.43
UBA3-203ENST00000415609 GPC4O75487 556 aa12.36□□□□□ -0.43
UBA3-203ENST00000415609 CLDN11O75508 207 aa12.36□□□□□ -0.43
UBA3-203ENST00000415609 MT-CO1P00395 513 aa12.36□□□□□ -0.43
UBA3-203ENST00000415609 IRF1P10914 325 aa12.36□□□□□ -0.43
UBA3-203ENST00000415609 ZNF37AP17032 561 aaPredicted RBP12.36□□□□□ -0.43
UBA3-203ENST00000415609 XRCC1P18887 633 aaPredicted RBP12.36□□□□□ -0.43
UBA3-203ENST00000415609 CORO1AP31146 461 aaKnown RBP12.36□□□□□ -0.43
UBA3-203ENST00000415609 TUFMP49411 452 aaKnown RBP12.36□□□□□ -0.43
UBA3-203ENST00000415609 HERVK_113P63132 956 aa12.36□□□□□ -0.43
UBA3-203ENST00000415609 FASTKQ14296 549 aaKnown RBP12.36□□□□□ -0.43
UBA3-203ENST00000415609 SQLEQ14534 574 aa12.36□□□□□ -0.43
UBA3-203ENST00000415609 ZNF423Q2M1K9 1284 aa12.36□□□□□ -0.43
UBA3-203ENST00000415609 CHSY3Q70JA7 882 aa12.36□□□□□ -0.43
UBA3-203ENST00000415609 RAB44Q7Z6P3 723 aaPredicted RBP12.36□□□□□ -0.43
UBA3-203ENST00000415609 PTGR2Q8N8N7 351 aaPredicted RBP12.36□□□□□ -0.43
UBA3-203ENST00000415609 CDKN2AIPNLQ96HQ2 116 aa12.36□□□□□ -0.43
UBA3-203ENST00000415609 CAPNS2Q96L46 248 aa12.36□□□□□ -0.43
UBA3-203ENST00000415609 AARSD1Q9BTE6 412 aaKnown RBP12.36□□□□□ -0.43
UBA3-203ENST00000415609 ERVK-6Q9BXR3 956 aa12.36□□□□□ -0.43
UBA3-203ENST00000415609 MRPL1Q9BYD6 325 aaKnown RBP12.36□□□□□ -0.43
UBA3-203ENST00000415609 KLHL4Q9C0H6 718 aa12.36□□□□□ -0.43
UBA3-203ENST00000415609 TRPC7Q9HCX4 862 aa12.36□□□□□ -0.43
UBA3-203ENST00000415609 SCUBE2Q9NQ36 999 aa12.36□□□□□ -0.43
UBA3-203ENST00000415609 MRGBPQ9NV56 204 aa12.36□□□□□ -0.43
UBA3-203ENST00000415609 VPS28Q9UK41 221 aa12.36□□□□□ -0.43
UBA3-203ENST00000415609 RIMKLBQ9ULI2 386 aa12.36□□□□□ -0.43
UBA3-203ENST00000415609 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.35□□□□□ -0.43
UBA3-203ENST00000415609 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.35□□□□□ -0.43
UBA3-203ENST00000415609 MAGEA13PA6NCF6 341 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 STX16-NPEPL1H3BU86 382 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 CBX4O00257 560 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 INSIG1O15503 277 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 TSPAN3O60637 253 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 RHOBTB1O94844 696 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 UPP2O95045 317 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 PENKP01210 267 aaPredicted RBP12.35□□□□□ -0.43
UBA3-203ENST00000415609 MSX2P35548 267 aaPredicted RBP12.35□□□□□ -0.43
UBA3-203ENST00000415609 DPP6P42658 865 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 SGSHP51688 502 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 ZNF140P52738 457 aaPredicted RBP12.35□□□□□ -0.43
UBA3-203ENST00000415609 INHBCP55103 352 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 NFKB2Q00653 900 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 TIAL1Q01085 375 aaKnown RBP eCLIP12.35□□□□□ -0.43
UBA3-203ENST00000415609 ZNF177Q13360 481 aaPredicted RBP12.35□□□□□ -0.43
UBA3-203ENST00000415609 CEACAM7Q14002 265 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 RFTN1Q14699 578 aaPredicted RBP12.35□□□□□ -0.43
UBA3-203ENST00000415609 MAPRE2Q15555 327 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 OR4D1Q15615 310 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 GSTA3Q16772 222 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 TYSND1Q2T9J0 566 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 UNC50Q53HI1 259 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 FAM219BQ5XKK7 198 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 SLC8B1Q6J4K2 584 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 AFTPHQ6ULP2 937 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 PDSS2Q86YH6 399 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 OR4K2Q8NGD2 314 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 PLD4Q96BZ4 506 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 SCLYQ96I15 445 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 PPP1R12CQ9BZL4 782 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 CCDC68Q9H2F9 335 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 POPDC3Q9HBV1 291 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 GKN1Q9NS71 199 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 NLE1Q9NVX2 485 aaPredicted RBP12.35□□□□□ -0.43
UBA3-203ENST00000415609 POLR3BQ9NW08 1133 aaPredicted RBP12.35□□□□□ -0.43
UBA3-203ENST00000415609 MTRRQ9UBK8 725 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 CHD5Q8TDI0 1954 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 CCDC189A1A4V9 331 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 UBXN8O00124 270 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms