RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 P3H4Q92791 437 aa18.86■□□□□ 0.61
TRIM56-202ENST00000412507 TSACCQ96A04 125 aaPredicted RBP18.86■□□□□ 0.61
TRIM56-202ENST00000412507 FUBP1Q96AE4 644 aaKnown RBP18.86■□□□□ 0.61
TRIM56-202ENST00000412507 RBM15Q96T37 977 aaKnown RBP eCLIP18.86■□□□□ 0.613e-6■■■□□ 15
TRIM56-202ENST00000412507 NLGN3Q9NZ94 848 aa18.86■□□□□ 0.61
TRIM56-202ENST00000412507 MSRB2Q9Y3D2 182 aa18.86■□□□□ 0.61
TRIM56-202ENST00000412507 CCDC66A2RUB6 948 aa18.85■□□□□ 0.61
TRIM56-202ENST00000412507 K7ESM1 405 aa18.85■□□□□ 0.61
TRIM56-202ENST00000412507 PSMD11O00231 422 aa18.85■□□□□ 0.61
TRIM56-202ENST00000412507 RFPL3O75679 317 aa18.85■□□□□ 0.61
TRIM56-202ENST00000412507 ALPPL2P10696 532 aa18.85■□□□□ 0.61
TRIM56-202ENST00000412507 CKMT2P17540 419 aa18.85■□□□□ 0.61
TRIM56-202ENST00000412507 PTPN3P26045 913 aa18.85■□□□□ 0.61
TRIM56-202ENST00000412507 CTNNA2P26232 953 aa18.85■□□□□ 0.61
TRIM56-202ENST00000412507 HTR1BP28222 390 aa18.85■□□□□ 0.61
TRIM56-202ENST00000412507 GSDMDP57764 484 aa18.85■□□□□ 0.61
TRIM56-202ENST00000412507 DAB2P98082 770 aa18.85■□□□□ 0.61
TRIM56-202ENST00000412507 C1orf61Q13536 156 aa18.85■□□□□ 0.61
TRIM56-202ENST00000412507 TEX44Q53QW1 395 aa18.85■□□□□ 0.61
TRIM56-202ENST00000412507 PRRT3Q5FWE3 981 aa18.85■□□□□ 0.61
TRIM56-202ENST00000412507 LRRC66Q68CR7 880 aa18.85■□□□□ 0.61
TRIM56-202ENST00000412507 PNCKQ6P2M8 343 aa18.85■□□□□ 0.61
TRIM56-202ENST00000412507 DHRS13Q6UX07 377 aa18.85■□□□□ 0.61
TRIM56-202ENST00000412507 Q6ZVL8 140 aa18.85■□□□□ 0.61
TRIM56-202ENST00000412507 BBS12Q6ZW61 710 aa18.85■□□□□ 0.61
TRIM56-202ENST00000412507 NT5DC3Q86UY8 548 aa18.85■□□□□ 0.61
TRIM56-202ENST00000412507 HID1Q8IV36 788 aa18.85■□□□□ 0.61
TRIM56-202ENST00000412507 TXLNBQ8N3L3 684 aa18.85■□□□□ 0.61
TRIM56-202ENST00000412507 DTD2Q96FN9 168 aa18.85■□□□□ 0.61
TRIM56-202ENST00000412507 IMP4Q96G21 291 aaKnown RBP18.85■□□□□ 0.61
TRIM56-202ENST00000412507 WDR92Q96MX6 357 aa18.85■□□□□ 0.61
TRIM56-202ENST00000412507 HERPUD2Q9BSE4 406 aa18.85■□□□□ 0.61
TRIM56-202ENST00000412507 LRRC61Q9BV99 259 aa18.85■□□□□ 0.61
TRIM56-202ENST00000412507 SLC13A1Q9BZW2 595 aa18.85■□□□□ 0.61
TRIM56-202ENST00000412507 SPASTQ9UBP0 616 aa18.85■□□□□ 0.61
TRIM56-202ENST00000412507 CSNK1G3Q9Y6M4 447 aa18.85■□□□□ 0.61
TRIM56-202ENST00000412507 IGF2RP11717 2491 aa18.85■□□□□ 0.61
TRIM56-202ENST00000412507 FAM221BA6H8Z2 402 aa18.84■□□□□ 0.61
TRIM56-202ENST00000412507 CAPN8A6NHC0 703 aa18.84■□□□□ 0.61
TRIM56-202ENST00000412507 CACNB4O00305 520 aaPredicted RBP18.84■□□□□ 0.61
TRIM56-202ENST00000412507 GCATO75600 419 aa18.84■□□□□ 0.61
TRIM56-202ENST00000412507 MYF5P13349 255 aa18.84■□□□□ 0.61
TRIM56-202ENST00000412507 TRIM23P36406 574 aa18.84■□□□□ 0.61
TRIM56-202ENST00000412507 COPS2P61201 443 aa18.84■□□□□ 0.61
TRIM56-202ENST00000412507 ALG11Q2TAA5 492 aa18.84■□□□□ 0.61
TRIM56-202ENST00000412507 DEFB133Q30KQ1 61 aa18.84■□□□□ 0.61
TRIM56-202ENST00000412507 RFLNAQ6ZTI6 216 aa18.84■□□□□ 0.61
TRIM56-202ENST00000412507 RD3Q7Z3Z2 195 aa18.84■□□□□ 0.61
TRIM56-202ENST00000412507 APOLD1Q96LR9 279 aa18.84■□□□□ 0.61
TRIM56-202ENST00000412507 LGR4Q9BXB1 951 aa18.84■□□□□ 0.61
TRIM56-202ENST00000412507 SLC25A51Q9H1U9 297 aa18.84■□□□□ 0.61
TRIM56-202ENST00000412507 GLOD4Q9HC38 313 aa18.84■□□□□ 0.61
TRIM56-202ENST00000412507 KCTD5Q9NXV2 234 aa18.84■□□□□ 0.61
TRIM56-202ENST00000412507 KLQ9UEF7 1012 aa18.84■□□□□ 0.61
TRIM56-202ENST00000412507 CD84Q9UIB8 345 aa18.84■□□□□ 0.61
TRIM56-202ENST00000412507 AMFRQ9UKV5 643 aa18.84■□□□□ 0.61
TRIM56-202ENST00000412507 PCDHGA1Q9Y5H4 931 aa18.84■□□□□ 0.61
TRIM56-202ENST00000412507 EPG5Q9HCE0 2579 aa18.83■□□□□ 0.6
TRIM56-202ENST00000412507 GOLGA6CA6NDK9 693 aa18.83■□□□□ 0.6
TRIM56-202ENST00000412507 GOLGA6BA6NDN3 693 aa18.83■□□□□ 0.6
TRIM56-202ENST00000412507 TMEM202A6NGA9 273 aa18.83■□□□□ 0.6
TRIM56-202ENST00000412507 C1QTNF9BB2RNN3 333 aa18.83■□□□□ 0.6
TRIM56-202ENST00000412507 APOC4-APOC2K7ER74 178 aa18.83■□□□□ 0.6
TRIM56-202ENST00000412507 RASGRP1O95267 797 aa18.83■□□□□ 0.6
TRIM56-202ENST00000412507 APOC2P02655 101 aa18.83■□□□□ 0.6
TRIM56-202ENST00000412507 C1SP09871 688 aa18.83■□□□□ 0.6
TRIM56-202ENST00000412507 C1QTNF9P0C862 333 aa18.83■□□□□ 0.6
TRIM56-202ENST00000412507 GOLGA6DP0CG33 693 aa18.83■□□□□ 0.6
TRIM56-202ENST00000412507 ZNF30P17039 623 aa18.83■□□□□ 0.6
TRIM56-202ENST00000412507 HK3P52790 923 aa18.83■□□□□ 0.6
TRIM56-202ENST00000412507 RWDD2BP57060 319 aa18.83■□□□□ 0.6
TRIM56-202ENST00000412507 KIAA1024LP59773 190 aa18.83■□□□□ 0.6
TRIM56-202ENST00000412507 SRP54P61011 504 aaKnown RBP18.83■□□□□ 0.6
TRIM56-202ENST00000412507 RPL26P61254 145 aaKnown RBP18.83■□□□□ 0.6
TRIM56-202ENST00000412507 PTSQ03393 145 aa18.83■□□□□ 0.6
TRIM56-202ENST00000412507 WASHC5Q12768 1159 aa18.83■□□□□ 0.6
TRIM56-202ENST00000412507 TCEA2Q15560 299 aa18.83■□□□□ 0.6
TRIM56-202ENST00000412507 QPCTQ16769 361 aa18.83■□□□□ 0.6
TRIM56-202ENST00000412507 KCTD16Q68DU8 428 aa18.83■□□□□ 0.6
TRIM56-202ENST00000412507 AADACL2Q6P093 401 aa18.83■□□□□ 0.6
TRIM56-202ENST00000412507 TMPRSS7Q7RTY8 843 aa18.83■□□□□ 0.6
TRIM56-202ENST00000412507 PEX26Q7Z412 305 aa18.83■□□□□ 0.6
TRIM56-202ENST00000412507 KDELC2Q7Z4H8 507 aa18.83■□□□□ 0.6
TRIM56-202ENST00000412507 TECPR1Q7Z6L1 1165 aa18.83■□□□□ 0.6
TRIM56-202ENST00000412507 ATL2Q8NHH9 583 aa18.83■□□□□ 0.6
TRIM56-202ENST00000412507 SPATA22Q8NHS9 363 aa18.83■□□□□ 0.6
TRIM56-202ENST00000412507 ALG3Q92685 438 aa18.83■□□□□ 0.6
TRIM56-202ENST00000412507 TEKT5Q96M29 485 aa18.83■□□□□ 0.6
TRIM56-202ENST00000412507 DUSP23Q9BVJ7 150 aa18.83■□□□□ 0.6
TRIM56-202ENST00000412507 TMEM121BQ9BXQ6 578 aaPredicted RBP18.83■□□□□ 0.6
TRIM56-202ENST00000412507 CLPBQ9H078 707 aa18.83■□□□□ 0.6
TRIM56-202ENST00000412507 WDR26Q9H7D7 661 aa18.83■□□□□ 0.6
TRIM56-202ENST00000412507 GOLGA6AQ9NYA3 693 aa18.83■□□□□ 0.6
TRIM56-202ENST00000412507 PACSIN2Q9UNF0 486 aaPredicted RBP18.83■□□□□ 0.6
TRIM56-202ENST00000412507 RPL26L1Q9UNX3 145 aaKnown RBP18.83■□□□□ 0.6
TRIM56-202ENST00000412507 ANKRD66B4E2M5 251 aa18.82■□□□□ 0.6
TRIM56-202ENST00000412507 CLDN7O95471 211 aa18.82■□□□□ 0.6
TRIM56-202ENST00000412507 MT-CYBP00156 380 aaPredicted RBP18.82■□□□□ 0.6
TRIM56-202ENST00000412507 CELA2BP08218 269 aaPredicted RBP18.82■□□□□ 0.6
TRIM56-202ENST00000412507 HOXC4P09017 264 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms