RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 PMS2P54278 862 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 CDH15P55291 814 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 MAP2K1Q02750 393 aaPredicted RBP2.56□□□□□ -2
HMGB3P2-201ENST00000411913 PTP4A2Q12974 167 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 PKP1Q13835 747 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 BYSLQ13895 437 aaKnown RBP2.56□□□□□ -2
HMGB3P2-201ENST00000411913 MVPQ14764 893 aaKnown RBP2.56□□□□□ -2
HMGB3P2-201ENST00000411913 NAA25Q14CX7 972 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 ZKSCAN8Q15776 578 aaPredicted RBP2.56□□□□□ -2
HMGB3P2-201ENST00000411913 TSTQ16762 297 aaKnown RBP2.56□□□□□ -2
HMGB3P2-201ENST00000411913 SH2D4BQ5SQS7 431 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 GPATCH4Q5T3I0 446 aaKnown RBP2.56□□□□□ -2
HMGB3P2-201ENST00000411913 FAM69AQ5T7M9 428 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 VWA5B1Q5TIE3 1220 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 CCDC30Q5VVM6 783 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 ZNF772Q68DY9 489 aaPredicted RBP2.56□□□□□ -2
HMGB3P2-201ENST00000411913 C8orf82Q6P1X6 216 aaPredicted RBP2.56□□□□□ -2
HMGB3P2-201ENST00000411913 SYT10Q6XYQ8 523 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 FAM43BQ6ZT52 329 aaPredicted RBP2.56□□□□□ -2
HMGB3P2-201ENST00000411913 TMTC3Q6ZXV5 915 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 MDGA2Q7Z553 956 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 ADGRG6Q86SQ4 1221 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 CAMK1DQ8IU85 385 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 VPS52Q8N1B4 723 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 C17orf53Q8N3J3 647 aaPredicted RBP2.56□□□□□ -2
HMGB3P2-201ENST00000411913 NME8Q8N427 588 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 PAQR4Q8N4S7 273 aaPredicted RBP2.56□□□□□ -2
HMGB3P2-201ENST00000411913 OR52N4Q8NGI2 321 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 FAM110DQ8TAY7 271 aaPredicted RBP2.56□□□□□ -2
HMGB3P2-201ENST00000411913 GOLGA5Q8TBA6 731 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 C2CD4CQ8TF44 421 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 RUFY2Q8WXA3 655 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 RAB40AQ8WXH6 277 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 ELP4Q96EB1 424 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 ERO1AQ96HE7 468 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 ZNF347Q96SE7 839 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 FIZ1Q96SL8 496 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 TREX2Q9BQ50 279 aaPredicted RBP2.56□□□□□ -2
HMGB3P2-201ENST00000411913 CLSTN3Q9BQT9 956 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.56□□□□□ -2
HMGB3P2-201ENST00000411913 POLDIP3Q9BY77 421 aaKnown RBP2.56□□□□□ -2
HMGB3P2-201ENST00000411913 CXorf56Q9H5V9 222 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 PLEKHA5Q9HAU0 1116 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 VEZTQ9HBM0 779 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 TMEM248Q9NWD8 314 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 OCIAD1Q9NX40 245 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 ORC3Q9UBD5 711 aaPredicted RBP2.56□□□□□ -2
HMGB3P2-201ENST00000411913 LCMT1Q9UIC8 334 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 NAALADL1Q9UQQ1 740 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 V9GYY5 206 aaPredicted RBP2.56□□□□□ -2
HMGB3P2-201ENST00000411913 DAPK1P53355 1430 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 PRAG1Q86YV5 1406 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 PLA2R1Q13018 1463 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 IQSEC2Q5JU85 1478 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 PRDM15P57071 1507 aaPredicted RBP2.56□□□□□ -2
HMGB3P2-201ENST00000411913 KIAA0586Q9BVV6 1533 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 LAMC3Q9Y6N6 1575 aa2.56□□□□□ -2
HMGB3P2-201ENST00000411913 DNMT1P26358 1616 aaKnown RBP2.56□□□□□ -2
HMGB3P2-201ENST00000411913 ANKRD18BA2A2Z9 1011 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 PI4KAP2A4QPH2 592 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 TTC36A6NLP5 189 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 C17orf100A8MU93 164 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 MS4A18H0YCH9 400 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 I6L893 689 aaPredicted RBP2.55□□□□□ -2
HMGB3P2-201ENST00000411913 EIF4G3O43432 1585 aaKnown RBP2.55□□□□□ -2
HMGB3P2-201ENST00000411913 HBP1O60381 514 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 ZBED4O75132 1171 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 RNASEH2AO75792 299 aaKnown RBP2.55□□□□□ -2
HMGB3P2-201ENST00000411913 URODP06132 367 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 LDHCP07864 332 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 ZNF853P0CG23 659 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 PNMA6AP0CW24 399 aaPredicted RBP2.55□□□□□ -2
HMGB3P2-201ENST00000411913 HSPA1AP0DMV8 641 aaKnown RBP2.55□□□□□ -2
HMGB3P2-201ENST00000411913 HSPA1BP0DMV9 641 aaKnown RBP2.55□□□□□ -2
HMGB3P2-201ENST00000411913 UBL4AP11441 157 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 ITGB8P26012 769 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 EPHA8P29322 1005 aaPredicted RBP2.55□□□□□ -2
HMGB3P2-201ENST00000411913 TYK2P29597 1187 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 KRT2P35908 639 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 GGT5P36269 586 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 STAT1P42224 750 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 NOVP48745 357 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 CLNS1AP54105 237 aaKnown RBP2.55□□□□□ -2
HMGB3P2-201ENST00000411913 NAP1L1P55209 391 aaKnown RBP2.55□□□□□ -2
HMGB3P2-201ENST00000411913 SELENOVP59797 346 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 TUBA1BP68363 451 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 RHAGQ02094 409 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 GRSF1Q12849 480 aaKnown RBP eCLIP2.55□□□□□ -2
HMGB3P2-201ENST00000411913 PRKG2Q13237 762 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 CUL4AQ13619 759 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 PDE1CQ14123 709 aaPredicted RBP2.55□□□□□ -2
HMGB3P2-201ENST00000411913 KRT32Q14532 448 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 IL13RA2Q14627 380 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 AP5B1Q2VPB7 878 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 PLK5Q496M5 336 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 ALG10Q5BKT4 473 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 ALG10BQ5I7T1 473 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 ENTPD8Q5MY95 495 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 C10orf76Q5T2E6 689 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 SPATA1Q5VX52 437 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms