RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 BHLHE22Q8NFJ8 381 aaPredicted RBP11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 SYN2Q92777 582 aaPredicted RBP11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 IL17RBQ9NRM6 502 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 UGT2B17O75795 530 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 NOGQ13253 232 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 LSM12Q3MHD2 195 aaKnown RBP11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 CERCAMQ5T4B2 595 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 AFTPHQ6ULP2 937 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 METTL3Q86U44 580 aaKnown RBP11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 LRRC34Q8IZ02 419 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 TTC29Q8NA56 475 aaPredicted RBP11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 PABPC3Q9H361 631 aaKnown RBP11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 MRPS17Q9Y2R5 130 aaKnown RBP11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 MED31Q9Y3C7 131 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 PCDHAC2Q9Y5I4 1007 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 IQGAP1P46940 1657 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 LTN1O94822 1766 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 A0A1W2PQ72 361 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 PER2O15055 1255 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 GRM6O15303 877 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 AKAP3O75969 853 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 FGF19O95750 216 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 AP2M1Q96CW1 435 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 LINGO1Q96FE5 620 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 TRIM39Q9HCM9 518 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 TTC34A8MYJ7 566 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 DDX3XO00571 662 aaKnown RBP eCLIP11.24□□□□□ -0.611e-15■■□□□ 12.1
PRPF40A-202ENST00000410080 STBD1O95210 358 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 CYP1A1P04798 512 aaPredicted RBP11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 MLLT3P42568 568 aaPredicted RBP11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 SLC20A2Q08357 652 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 MOB2Q70IA6 237 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 C4orf19Q8IY42 314 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 ZNF433Q8N7K0 673 aaPredicted RBP11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 KIAA1522Q9P206 1035 aaPredicted RBP11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 TNFRSF21O75509 655 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 AHCYP23526 432 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 CDC25CP30307 473 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 PCDH1Q08174 1060 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 MAPKAPK3Q16644 382 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 INAVAQ3KP66 663 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 FNBP1LQ5T0N5 605 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 ZNF571Q7Z3V5 609 aaPredicted RBP11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 OR52K1Q8NGK4 314 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 DNPEPQ9ULA0 475 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 TBC1D24Q9ULP9 559 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 NCK1P16333 377 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 C15orf59Q2T9L4 293 aaPredicted RBP11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 IZUMO2Q6UXV1 221 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 ACTL9Q8TC94 416 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 HMGB4Q8WW32 186 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 SMG7Q92540 1137 aaKnown RBP11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 PANX1Q96RD7 426 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 PDCD2LQ9BRP1 358 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 TBC1D10AQ9BXI6 508 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 SEMA3GQ9NS98 782 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 ST3GAL5Q9UNP4 418 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 CACNA1SQ13698 1873 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 CCNOP22674 350 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 TOP3AQ13472 1001 aaPredicted RBP11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 PTCHD4Q6ZW05 846 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 ARMC10Q8N2F6 343 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 HERVK_113Q902F9 699 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 CD101Q93033 1021 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 ACE2Q9BYF1 805 aaPredicted RBP11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 CPSF4LA6NMK7 179 aaKnown RBP11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 CLDN4O14493 209 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 SERPINA1P01009 418 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 AVPR1BP47901 424 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 PER3P56645 1201 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 PIK3R6Q5UE93 754 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 TMPRSS9Q7Z410 1059 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 ZNF280BQ86YH2 543 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 GDPD5Q8WTR4 605 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 HAVCR1Q96D42 359 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 ZBTB10Q96DT7 871 aa11.24□□□□□ -0.61
PRPF40A-202ENST00000410080 NWD1Q149M9 1564 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 H3BUI4 141 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 TPST2O60704 377 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 ATG13O75143 517 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 TCF4P15884 667 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 SSTR1P30872 391 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 PKNOX1P55347 436 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 USP46P62068 366 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 LSM3P62310 102 aaKnown RBP11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 CPSF6Q16630 551 aaKnown RBP eCLIP11.23□□□□□ -0.612e-6■■■□□ 18.2
PRPF40A-202ENST00000410080 ALG1LQ6GMV1 187 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 MSANTD2Q6P1R3 559 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 Q8N9G6 341 aaPredicted RBP11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 LRRN4Q8WUT4 740 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 SMURF1Q9HCE7 757 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 NCDNQ9UBB6 729 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 DHRS7Q9Y394 339 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 IQCF5A8MTL0 148 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 GNPDA1P46926 289 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 ZNF132P52740 706 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 CDC42P60953 191 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 VBP1P61758 197 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 POU5F1Q01860 360 aaKnown RBP11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 PPATQ06203 517 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms