RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 LCMT1Q9UIC8 334 aa12.84□□□□□ -0.35
CHRNA1-205ENST00000409542 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.84□□□□□ -0.35
CHRNA1-205ENST00000409542 SCINQ9Y6U3 715 aa12.84□□□□□ -0.35
CHRNA1-205ENST00000409542 DRGXA6NNA5 263 aa12.83□□□□□ -0.36
CHRNA1-205ENST00000409542 M0QYT0 321 aa12.83□□□□□ -0.36
CHRNA1-205ENST00000409542 MED7O43513 233 aa12.83□□□□□ -0.36
CHRNA1-205ENST00000409542 PSTPIP1O43586 416 aa12.83□□□□□ -0.36
CHRNA1-205ENST00000409542 ZMPSTE24O75844 475 aa12.83□□□□□ -0.36
CHRNA1-205ENST00000409542 CD160O95971 181 aa12.83□□□□□ -0.36
CHRNA1-205ENST00000409542 ERBB2P04626 1255 aa12.83□□□□□ -0.36
CHRNA1-205ENST00000409542 GKP32189 559 aa12.83□□□□□ -0.36
CHRNA1-205ENST00000409542 ABL2P42684 1182 aa12.83□□□□□ -0.36
CHRNA1-205ENST00000409542 RPL21P46778 160 aaKnown RBP12.83□□□□□ -0.36
CHRNA1-205ENST00000409542 NEK3P51956 506 aa12.83□□□□□ -0.36
CHRNA1-205ENST00000409542 RPS21P63220 83 aaKnown RBP12.83□□□□□ -0.36
CHRNA1-205ENST00000409542 NR0B2Q15466 257 aa12.83□□□□□ -0.36
CHRNA1-205ENST00000409542 TGIF1Q15583 401 aa12.83□□□□□ -0.36
CHRNA1-205ENST00000409542 EFHC1Q5JVL4 640 aa12.83□□□□□ -0.36
CHRNA1-205ENST00000409542 OLFML1Q6UWY5 402 aa12.83□□□□□ -0.36
CHRNA1-205ENST00000409542 PARS2Q7L3T8 475 aaKnown RBP12.83□□□□□ -0.36
CHRNA1-205ENST00000409542 CROCCP2Q86T23 111 aa12.83□□□□□ -0.36
CHRNA1-205ENST00000409542 SRLQ86TD4 932 aa12.83□□□□□ -0.36
CHRNA1-205ENST00000409542 FAM174AQ8TBP5 190 aa12.83□□□□□ -0.36
CHRNA1-205ENST00000409542 FEM1CQ96JP0 617 aa12.83□□□□□ -0.36
CHRNA1-205ENST00000409542 BOCQ9BWV1 1114 aa12.83□□□□□ -0.36
CHRNA1-205ENST00000409542 CLPBQ9H078 707 aa12.83□□□□□ -0.36
CHRNA1-205ENST00000409542 TKTL2Q9H0I9 626 aa12.83□□□□□ -0.36
CHRNA1-205ENST00000409542 MRPL47Q9HD33 250 aaKnown RBP12.83□□□□□ -0.36
CHRNA1-205ENST00000409542 ARHGEF38Q9NXL2 777 aa12.83□□□□□ -0.36
CHRNA1-205ENST00000409542 MTRF1LQ9UGC7 380 aaKnown RBP12.83□□□□□ -0.36
CHRNA1-205ENST00000409542 IPO11Q9UI26 975 aaKnown RBP12.83□□□□□ -0.36
CHRNA1-205ENST00000409542 ITM2BQ9Y287 266 aa12.83□□□□□ -0.36
CHRNA1-205ENST00000409542 SNX24Q9Y343 169 aa12.83□□□□□ -0.36
CHRNA1-205ENST00000409542 SPTA1P02549 2419 aa12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 TCRBV7S2A1N4TA0A589 114 aa12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 NOBOXO60393 691 aa12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 ECEL1O95672 775 aa12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 LSM8O95777 96 aaKnown RBP12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 CELA2BP08218 269 aaPredicted RBP12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 L1CAMP32004 1257 aa12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 MDH1P40925 334 aaKnown RBP12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 RABIFP47224 123 aa12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 PMS2P54278 862 aa12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 PFN3P60673 137 aa12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 CCDC15Q0P6D6 951 aa12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 SLMAPQ14BN4 828 aa12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 DNAJC21Q5F1R6 531 aaKnown RBP12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 PLEKHA7Q6IQ23 1121 aa12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 KIAA1161Q6NSJ0 714 aa12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 B3GNT8Q7Z7M8 397 aa12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 HOOK3Q86VS8 718 aa12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 DCAF4L2Q8NA75 395 aa12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 OR2W6PQ8NHA6 318 aa12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 WDR36Q8NI36 951 aaKnown RBP12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 CPA5Q8WXQ8 436 aa12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 CCDC97Q96F63 343 aaPredicted RBP12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 CCDC114Q96M63 670 aa12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 LENG8Q96PV6 779 aaPredicted RBP12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 CCNL2Q96S94 520 aaPredicted RBP12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 NPY6RQ99463 290 aa12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 IL12RB2Q99665 862 aa12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 CCDC3Q9BQI4 270 aa12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 C2orf49Q9BVC5 232 aaPredicted RBP12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 C1QTNF2Q9BXJ5 285 aa12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 FAM107BQ9H098 131 aa12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 EPB41L4BQ9H329 900 aa12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 EVA1BQ9NVM1 165 aa12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 WDR70Q9NW82 654 aa12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 ZNF212Q9UDV6 495 aa12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 IL17BQ9UHF5 180 aa12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 RABGEF1Q9UJ41 708 aa12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 FCF1Q9Y324 198 aaKnown RBP12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 RRP15Q9Y3B9 282 aaKnown RBP12.82□□□□□ -0.36
CHRNA1-205ENST00000409542 DOCK4Q8N1I0 1966 aa12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 H3BM21 787 aa12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 NTN3O00634 580 aaPredicted RBP12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 FPGTO14772 594 aa12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 TPP1O14773 563 aa12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 DAB1O75553 588 aa12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 ITGB7P26010 798 aa12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 LSP1P33241 339 aa12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 NOS2P35228 1153 aa12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 CXCR3P49682 368 aa12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 ATP1A2P50993 1020 aa12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 PLTPP55058 493 aa12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 ARF5P84085 180 aa12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 PRRT3Q5FWE3 981 aa12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 SETD3Q86TU7 594 aaPredicted RBP12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 KATNAL2Q8IYT4 538 aa12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 ARL14Q8N4G2 192 aa12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 FBXO25Q8TCJ0 367 aa12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 BCAS4Q8TDM0 211 aa12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 ART4Q93070 314 aa12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 GRAMD1AQ96CP6 724 aa12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 TLCD1Q96CP7 247 aa12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 PPP1R16AQ96I34 528 aa12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 HEPHQ9BQS7 1158 aa12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 SPON2Q9BUD6 331 aa12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 TMEM109Q9BVC6 243 aa12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 EPN3Q9H201 632 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms