RNA–Protein interactions for RNA: ENST00000407585.5

PACSIN2-205, Transcript of protein kinase C and casein kinase substrate in neurons 2, humanhuman

TSL 1 (best) BASIC

Gene PACSIN2, Length 3,080 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN2-205ENST00000407585 PTGR2Q8N8N7 351 aaPredicted RBP17.25■□□□□ 0.35
PACSIN2-205ENST00000407585 DQX1Q8TE96 717 aaKnown RBP17.25■□□□□ 0.35
PACSIN2-205ENST00000407585 CENPNQ96H22 339 aaPredicted RBP17.25■□□□□ 0.35
PACSIN2-205ENST00000407585 VPS50Q96JG6 964 aa17.25■□□□□ 0.35
PACSIN2-205ENST00000407585 VTA1Q9NP79 307 aa17.25■□□□□ 0.35
PACSIN2-205ENST00000407585 AGPAT4Q9NRZ5 378 aa17.25■□□□□ 0.35
PACSIN2-205ENST00000407585 DNAJC15Q9Y5T4 150 aa17.25■□□□□ 0.35
PACSIN2-205ENST00000407585 H3BMQ9 156 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 MATN3O15232 486 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 CRCPO75575 148 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 SMPD1P17405 629 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 CES1P23141 567 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 ACADVLP49748 655 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 FOXA1P55317 472 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 BNIP3Q12983 259 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 UNC50Q53HI1 259 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 AARS2Q5JTZ9 985 aaKnown RBP17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 INTS11Q5TA45 600 aaKnown RBP17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 PM20D1Q6GTS8 502 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 ABRAXAS1Q6UWZ7 409 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 HACD2Q6Y1H2 254 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 LYSMD3Q7Z3D4 306 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 LZTR1Q8N653 840 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 MFSD2AQ8NA29 543 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 SH3RF2Q8TEC5 729 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 COG8Q96MW5 612 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 HOPXQ9BPY8 73 aaPredicted RBP17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 PRKD2Q9BZL6 878 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 TMEM165Q9HC07 324 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 CMTM6Q9NX76 183 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 TUBA8Q9NY65 449 aaPredicted RBP17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 SH3GLB1Q9Y371 365 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 TTC24A2A3L6 582 aaPredicted RBP17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 MSI1O43347 362 aaKnown RBP17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 BAIAP3O94812 1187 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 HGFP14210 728 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 ATP6V0D1P61421 351 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 PFKFB4Q16877 469 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 OTUD3Q5T2D3 398 aaPredicted RBP17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 Q6ZNX1 250 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 PACRGLQ8N7B6 248 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 GABPB2Q8TAK5 448 aaPredicted RBP17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 SEPT8Q92599 483 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 DPF3Q92784 378 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 ZUFSPQ96AP4 578 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 PGAP3Q96FM1 320 aaPredicted RBP17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 RPF2Q9H7B2 306 aaKnown RBP17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 GID8Q9NWU2 228 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 AQP12BA6NM10 295 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 H3BMM5 538 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 BDNFP23560 247 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 APLP1P51693 650 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 C21orf59P57076 290 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 CBX3Q13185 183 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 ATP1A4Q13733 1029 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 NFYCQ13952 458 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 SNX17Q15036 470 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 SLC36A3Q495N2 470 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 RABL3Q5HYI8 236 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 C8orf82Q6P1X6 216 aaPredicted RBP17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 DHRS4L2Q6PKH6 230 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 TMEM207Q6UWW9 146 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 KIAA0408Q6ZU52 694 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 AQP12AQ8IXF9 295 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 PTCD2Q8WV60 388 aaKnown RBP17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 TWIST2Q8WVJ9 160 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 VPS33AQ96AX1 596 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 DCPSQ96C86 337 aaKnown RBP17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 IL12RB2Q99665 862 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 NT5MQ9NPB1 228 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 PTBP2Q9UKA9 531 aaKnown RBP17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 WDR90Q96KV7 1748 aa17.24■□□□□ 0.35
PACSIN2-205ENST00000407585 MEIS3P2A8K0S8 358 aa17.23■□□□□ 0.35
PACSIN2-205ENST00000407585 BBIP1A8MTZ0 92 aa17.23■□□□□ 0.35
PACSIN2-205ENST00000407585 SMIM10L2AP0DMW4 78 aa17.23■□□□□ 0.35
PACSIN2-205ENST00000407585 SMIM10L2BP0DMW5 78 aa17.23■□□□□ 0.35
PACSIN2-205ENST00000407585 CD247P20963 164 aa17.23■□□□□ 0.35
PACSIN2-205ENST00000407585 ADRA1AP35348 466 aa17.23■□□□□ 0.35
PACSIN2-205ENST00000407585 TRAF2Q12933 501 aa17.23■□□□□ 0.35
PACSIN2-205ENST00000407585 ZIK1Q3SY52 487 aaPredicted RBP17.23■□□□□ 0.35
PACSIN2-205ENST00000407585 PAN2Q504Q3 1202 aaKnown RBP17.23■□□□□ 0.35
PACSIN2-205ENST00000407585 OGFOD2Q6N063 350 aa17.23■□□□□ 0.35
PACSIN2-205ENST00000407585 RANBP10Q6VN20 620 aa17.23■□□□□ 0.35
PACSIN2-205ENST00000407585 LIMS2Q7Z4I7 341 aa17.23■□□□□ 0.35
PACSIN2-205ENST00000407585 DEFB132Q7Z7B7 95 aa17.23■□□□□ 0.35
PACSIN2-205ENST00000407585 NSUN5Q96P11 429 aaKnown RBP17.23■□□□□ 0.35
PACSIN2-205ENST00000407585 TRMOQ9BU70 441 aa17.23■□□□□ 0.35
PACSIN2-205ENST00000407585 TSPYL2Q9H2G4 693 aaPredicted RBP17.23■□□□□ 0.35
PACSIN2-205ENST00000407585 RGS18Q9NS28 235 aa17.23■□□□□ 0.35
PACSIN2-205ENST00000407585 PKD2L2Q9NZM6 624 aa17.23■□□□□ 0.35
PACSIN2-205ENST00000407585 HACD3Q9P035 362 aa17.23■□□□□ 0.35
PACSIN2-205ENST00000407585 RRN3P2A6NIE6 340 aa17.23■□□□□ 0.35
PACSIN2-205ENST00000407585 CXCL11O14625 94 aa17.23■□□□□ 0.35
PACSIN2-205ENST00000407585 DYNC1LI2O43237 492 aaPredicted RBP17.23■□□□□ 0.35
PACSIN2-205ENST00000407585 CACNG3O60359 315 aa17.23■□□□□ 0.35
PACSIN2-205ENST00000407585 PAGE1O75459 146 aa17.23■□□□□ 0.35
PACSIN2-205ENST00000407585 GFAPP14136 432 aa17.23■□□□□ 0.35
PACSIN2-205ENST00000407585 ZNF772Q68DY9 489 aaPredicted RBP17.23■□□□□ 0.35
PACSIN2-205ENST00000407585 ISCA2Q86U28 154 aa17.23■□□□□ 0.35
PACSIN2-205ENST00000407585 PPP1R14BQ96C90 147 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms