RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 PIRTP0C851 137 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 ZCCHC18P0CG32 403 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 HOXD9P28356 352 aaPredicted RBP16.85■□□□□ 0.29
NUP50-203ENST00000407019 MSX2P35548 267 aaPredicted RBP16.85■□□□□ 0.29
NUP50-203ENST00000407019 AGKQ53H12 422 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 UNC50Q53HI1 259 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 RTP2Q5QGT7 225 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 OR4L1Q8NH43 312 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 C2orf15Q8WU43 125 aaKnown RBP16.85■□□□□ 0.29
NUP50-203ENST00000407019 EXT2Q93063 718 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 BTBD9Q96Q07 612 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 DDX50Q9BQ39 737 aaKnown RBP16.85■□□□□ 0.29
NUP50-203ENST00000407019 MGME1Q9BQP7 344 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 MAGEH1Q9H213 219 aa16.85■□□□□ 0.29
NUP50-203ENST00000407019 A0A0D9SEW6 157 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 A0A1W2PQ45 241 aaPredicted RBP16.84■□□□□ 0.29
NUP50-203ENST00000407019 A0A1W2PQY0 241 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 ACSL4O60488 711 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 ZNF37AP17032 561 aaPredicted RBP16.84■□□□□ 0.29
NUP50-203ENST00000407019 SLC6A4P31645 630 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 PSME3P61289 254 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 TIAL1Q01085 375 aaKnown RBP eCLIP16.84■□□□□ 0.29
NUP50-203ENST00000407019 GNA12Q03113 381 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 ELAVL2Q12926 359 aaKnown RBP16.84■□□□□ 0.29
NUP50-203ENST00000407019 PDAP1Q13442 181 aaKnown RBP16.84■□□□□ 0.29
NUP50-203ENST00000407019 ADGRE1Q14246 886 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 MMEL1Q495T6 779 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 RARS2Q5T160 578 aaKnown RBP16.84■□□□□ 0.29
NUP50-203ENST00000407019 RNF220Q5VTB9 566 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 REP15Q6BDI9 236 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 IL31Q6EBC2 164 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 CLEC6AQ6EIG7 209 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 TMEM126BQ8IUX1 230 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 RYBPQ8N488 228 aaPredicted RBP16.84■□□□□ 0.29
NUP50-203ENST00000407019 SLC43A3Q8NBI5 491 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 LRGUKQ96M69 825 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 TRIB3Q96RU7 358 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 CDK5RAP1Q96SZ6 601 aaKnown RBP16.84■□□□□ 0.29
NUP50-203ENST00000407019 MRPL40Q9NQ50 206 aaKnown RBP16.84■□□□□ 0.29
NUP50-203ENST00000407019 STARD7Q9NQZ5 370 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 ADA2Q9NZK5 511 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 SEPT3Q9UH03 358 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 PCDHGA7Q9Y5G6 932 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 CCDC189A1A4V9 331 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 ENPP3O14638 875 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 ACOT8O14734 319 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 VCLP18206 1134 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 ATF6P18850 670 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 TSPAN8P19075 237 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 PMLP29590 882 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 STC1P52823 247 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 SP3Q02447 781 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 TYSND1Q2T9J0 566 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 RAB44Q7Z6P3 723 aaPredicted RBP16.84■□□□□ 0.29
NUP50-203ENST00000407019 PTGR2Q8N8N7 351 aaPredicted RBP16.84■□□□□ 0.29
NUP50-203ENST00000407019 OR7D4Q8NG98 312 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 TRAPPC9Q96Q05 1148 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 ASB2Q96Q27 587 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 TSEN34Q9BSV6 310 aaKnown RBP16.84■□□□□ 0.29
NUP50-203ENST00000407019 AARSD1Q9BTE6 412 aaKnown RBP16.84■□□□□ 0.29
NUP50-203ENST00000407019 CINPQ9BW66 212 aaPredicted RBP16.84■□□□□ 0.29
NUP50-203ENST00000407019 POLR3BQ9NW08 1133 aaPredicted RBP16.84■□□□□ 0.29
NUP50-203ENST00000407019 CACNA2D2Q9NY47 1150 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 HCSTQ9UBK5 93 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 UBA2Q9UBT2 640 aaPredicted RBP16.84■□□□□ 0.29
NUP50-203ENST00000407019 DNMT3LQ9UJW3 386 aa16.84■□□□□ 0.29
NUP50-203ENST00000407019 CRTAMO95727 393 aa16.83■□□□□ 0.28
NUP50-203ENST00000407019 SNRPB2P08579 225 aaKnown RBP16.83■□□□□ 0.28
NUP50-203ENST00000407019 SELPP16109 830 aa16.83■□□□□ 0.28
NUP50-203ENST00000407019 ATP4BP51164 291 aa16.83■□□□□ 0.28
NUP50-203ENST00000407019 LRP8Q14114 963 aa16.83■□□□□ 0.28
NUP50-203ENST00000407019 ANKS3Q6ZW76 656 aa16.83■□□□□ 0.28
NUP50-203ENST00000407019 PCDH20Q8N6Y1 951 aaKnown RBP16.83■□□□□ 0.28
NUP50-203ENST00000407019 PHC3Q8NDX5 983 aa16.83■□□□□ 0.28
NUP50-203ENST00000407019 C19orf60Q96EN9 201 aa16.83■□□□□ 0.28
NUP50-203ENST00000407019 DCUN1D1Q96GG9 259 aa16.83■□□□□ 0.28
NUP50-203ENST00000407019 TTLL2Q9BWV7 592 aa16.83■□□□□ 0.28
NUP50-203ENST00000407019 UNC93B1Q9H1C4 597 aa16.83■□□□□ 0.28
NUP50-203ENST00000407019 INTS10Q9NVR2 710 aaKnown RBP16.83■□□□□ 0.28
NUP50-203ENST00000407019 CCDC167Q9P0B6 97 aa16.83■□□□□ 0.28
NUP50-203ENST00000407019 RIMS3Q9UJD0 308 aa16.83■□□□□ 0.28
NUP50-203ENST00000407019 SARDHQ9UL12 918 aa16.83■□□□□ 0.28
NUP50-203ENST00000407019 LRFN2Q9ULH4 789 aa16.83■□□□□ 0.28
NUP50-203ENST00000407019 ACTL7AQ9Y615 435 aa16.83■□□□□ 0.28
NUP50-203ENST00000407019 ZFP37Q9Y6Q3 630 aaPredicted RBP16.83■□□□□ 0.28
NUP50-203ENST00000407019 GREB1Q4ZG55 1949 aa16.82■□□□□ 0.28
NUP50-203ENST00000407019 CAPN8A6NHC0 703 aa16.82■□□□□ 0.28
NUP50-203ENST00000407019 FBP2O00757 339 aa16.82■□□□□ 0.28
NUP50-203ENST00000407019 MAP3K13O43283 966 aa16.82■□□□□ 0.28
NUP50-203ENST00000407019 ATP5C1P36542 298 aaKnown RBP16.82■□□□□ 0.28
NUP50-203ENST00000407019 PSMD8P48556 350 aa16.82■□□□□ 0.28
NUP50-203ENST00000407019 SLC11A2P49281 568 aa16.82■□□□□ 0.28
NUP50-203ENST00000407019 ZNF140P52738 457 aaPredicted RBP16.82■□□□□ 0.28
NUP50-203ENST00000407019 CDH4P55283 916 aa16.82■□□□□ 0.28
NUP50-203ENST00000407019 OR4D1Q15615 310 aa16.82■□□□□ 0.28
NUP50-203ENST00000407019 EML3Q32P44 896 aa16.82■□□□□ 0.28
NUP50-203ENST00000407019 LARP4Q71RC2 724 aaKnown RBP eCLIP16.82■□□□□ 0.28
NUP50-203ENST00000407019 CLYBLQ8N0X4 340 aa16.82■□□□□ 0.28
NUP50-203ENST00000407019 CATSPER1Q8NEC5 780 aa16.82■□□□□ 0.28
NUP50-203ENST00000407019 DBF4BQ8NFT6 615 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms