RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 TAS2R14Q9NYV8 317 aa11.94□□□□□ -0.5
LINC00544-201ENST00000400540 B4GALT6Q9UBX8 382 aa11.94□□□□□ -0.5
LINC00544-201ENST00000400540 DOPEY2Q9Y3R5 2298 aa11.93□□□□□ -0.5
LINC00544-201ENST00000400540 IGHV5-10-1A0A0J9YXX1 117 aa11.93□□□□□ -0.5
LINC00544-201ENST00000400540 ANKRD62A6NC57 917 aa11.93□□□□□ -0.5
LINC00544-201ENST00000400540 ECEL1O95672 775 aa11.93□□□□□ -0.5
LINC00544-201ENST00000400540 CPNE6O95741 557 aa11.93□□□□□ -0.5
LINC00544-201ENST00000400540 CEACAM5P06731 702 aa11.93□□□□□ -0.5
LINC00544-201ENST00000400540 HOXC4P09017 264 aaPredicted RBP11.93□□□□□ -0.5
LINC00544-201ENST00000400540 FGF3P11487 239 aaPredicted RBP11.93□□□□□ -0.5
LINC00544-201ENST00000400540 MYCLP1P12525 358 aaPredicted RBP11.93□□□□□ -0.5
LINC00544-201ENST00000400540 CCNB1P14635 433 aa11.93□□□□□ -0.5
LINC00544-201ENST00000400540 ERCC2P18074 760 aa11.93□□□□□ -0.5
LINC00544-201ENST00000400540 KELP23276 732 aa11.93□□□□□ -0.5
LINC00544-201ENST00000400540 MPSTP25325 297 aa11.93□□□□□ -0.5
LINC00544-201ENST00000400540 ALDH4A1P30038 563 aa11.93□□□□□ -0.5
LINC00544-201ENST00000400540 GNPDA1P46926 289 aa11.93□□□□□ -0.5
LINC00544-201ENST00000400540 SCNN1BP51168 640 aa11.93□□□□□ -0.5
LINC00544-201ENST00000400540 PTPRRQ15256 657 aa11.93□□□□□ -0.5
LINC00544-201ENST00000400540 CNGA3Q16281 694 aa11.93□□□□□ -0.5
LINC00544-201ENST00000400540 FKBP15Q5T1M5 1219 aa11.93□□□□□ -0.5
LINC00544-201ENST00000400540 NKAIN2Q5VXU1 208 aa11.93□□□□□ -0.5
LINC00544-201ENST00000400540 DENND2CQ68D51 928 aa11.93□□□□□ -0.5
LINC00544-201ENST00000400540 DCUN1D2Q6PH85 259 aa11.93□□□□□ -0.5
LINC00544-201ENST00000400540 CYP4V2Q6ZWL3 525 aaPredicted RBP11.93□□□□□ -0.5
LINC00544-201ENST00000400540 ZNF438Q7Z4V0 828 aa11.93□□□□□ -0.5
LINC00544-201ENST00000400540 PIM3Q86V86 326 aa11.93□□□□□ -0.5
LINC00544-201ENST00000400540 C17orf82Q86X59 251 aaPredicted RBP11.93□□□□□ -0.5
LINC00544-201ENST00000400540 MCOLN2Q8IZK6 566 aa11.93□□□□□ -0.5
LINC00544-201ENST00000400540 ENOX1Q8TC92 643 aaKnown RBP11.93□□□□□ -0.5
LINC00544-201ENST00000400540 KIAA1524Q8TCG1 905 aa11.93□□□□□ -0.5
LINC00544-201ENST00000400540 NUS1Q96E22 293 aa11.93□□□□□ -0.5
LINC00544-201ENST00000400540 PCMTD1Q96MG8 357 aaPredicted RBP11.93□□□□□ -0.5
LINC00544-201ENST00000400540 SNRNP25Q9BV90 132 aaKnown RBP11.93□□□□□ -0.5
LINC00544-201ENST00000400540 FANCLQ9NW38 375 aa11.93□□□□□ -0.5
LINC00544-201ENST00000400540 TAAR2Q9P1P5 351 aa11.93□□□□□ -0.5
LINC00544-201ENST00000400540 PCSK1NQ9UHG2 260 aa11.93□□□□□ -0.5
LINC00544-201ENST00000400540 SUFUQ9UMX1 484 aa11.93□□□□□ -0.5
LINC00544-201ENST00000400540 PLEKHM1Q9Y4G2 1056 aa11.93□□□□□ -0.5
LINC00544-201ENST00000400540 PCDHB11Q9Y5F2 797 aa11.93□□□□□ -0.5
LINC00544-201ENST00000400540 GTF3C3Q9Y5Q9 886 aa11.93□□□□□ -0.5
LINC00544-201ENST00000400540 A0A0U1RQS6 177 aa11.92□□□□□ -0.5
LINC00544-201ENST00000400540 RHPN2P1A8MT19 583 aa11.92□□□□□ -0.5
LINC00544-201ENST00000400540 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.92□□□□□ -0.5
LINC00544-201ENST00000400540 STMND1H3BQB6 276 aa11.92□□□□□ -0.5
LINC00544-201ENST00000400540 LHCGRP22888 699 aa11.92□□□□□ -0.5
LINC00544-201ENST00000400540 PSMA2P25787 234 aa11.92□□□□□ -0.5
LINC00544-201ENST00000400540 CD1CP29017 333 aa11.92□□□□□ -0.5
LINC00544-201ENST00000400540 CSF2RBP32927 897 aa11.92□□□□□ -0.5
LINC00544-201ENST00000400540 HTR7P34969 479 aa11.92□□□□□ -0.5
LINC00544-201ENST00000400540 ETV3P41162 512 aa11.92□□□□□ -0.5
LINC00544-201ENST00000400540 POLD2P49005 469 aa11.92□□□□□ -0.5
LINC00544-201ENST00000400540 COPB1P53618 953 aaKnown RBP11.92□□□□□ -0.5
LINC00544-201ENST00000400540 IL10RBQ08334 325 aa11.92□□□□□ -0.5
LINC00544-201ENST00000400540 SLC10A7Q0GE19 358 aa11.92□□□□□ -0.5
LINC00544-201ENST00000400540 NR1D2Q14995 579 aa11.92□□□□□ -0.5
LINC00544-201ENST00000400540 PPP6R3Q5H9R7 873 aaPredicted RBP11.92□□□□□ -0.5
LINC00544-201ENST00000400540 ACAD10Q6JQN1 1059 aa11.92□□□□□ -0.5
LINC00544-201ENST00000400540 SLC30A9Q6PML9 568 aa11.92□□□□□ -0.5
LINC00544-201ENST00000400540 XKR5Q6UX68 686 aa11.92□□□□□ -0.5
LINC00544-201ENST00000400540 RFX8Q6ZV50 586 aa11.92□□□□□ -0.5
LINC00544-201ENST00000400540 HSD11B1LQ7Z5J1 315 aa11.92□□□□□ -0.5
LINC00544-201ENST00000400540 ZSCAN1Q8NBB4 408 aa11.92□□□□□ -0.5
LINC00544-201ENST00000400540 NEK11Q8NG66 645 aa11.92□□□□□ -0.5
LINC00544-201ENST00000400540 PDCD6IPQ8WUM4 868 aaKnown RBP11.92□□□□□ -0.5
LINC00544-201ENST00000400540 NKD1Q969G9 470 aa11.92□□□□□ -0.5
LINC00544-201ENST00000400540 SLC12A9Q9BXP2 914 aa11.92□□□□□ -0.5
LINC00544-201ENST00000400540 FRMD8Q9BZ67 464 aaPredicted RBP11.92□□□□□ -0.5
LINC00544-201ENST00000400540 TRIM7Q9C029 511 aa11.92□□□□□ -0.5
LINC00544-201ENST00000400540 TMEM9Q9P0T7 183 aa11.92□□□□□ -0.5
LINC00544-201ENST00000400540 PCDHGC4Q9Y5F7 938 aa11.92□□□□□ -0.5
LINC00544-201ENST00000400540 GOLGA6CA6NDK9 693 aa11.91□□□□□ -0.5
LINC00544-201ENST00000400540 GOLGA6BA6NDN3 693 aa11.91□□□□□ -0.5
LINC00544-201ENST00000400540 TMCO5BA8MYB1 307 aa11.91□□□□□ -0.5
LINC00544-201ENST00000400540 PPM1DO15297 605 aa11.91□□□□□ -0.5
LINC00544-201ENST00000400540 DAPK3O43293 454 aa11.91□□□□□ -0.5
LINC00544-201ENST00000400540 PPFIA2O75334 1257 aa11.91□□□□□ -0.5
LINC00544-201ENST00000400540 HEXIM1O94992 359 aaKnown RBP11.91□□□□□ -0.5
LINC00544-201ENST00000400540 CPP00450 1065 aa11.91□□□□□ -0.5
LINC00544-201ENST00000400540 TPM2P07951 284 aa11.91□□□□□ -0.5
LINC00544-201ENST00000400540 GOLGA6DP0CG33 693 aa11.91□□□□□ -0.5
LINC00544-201ENST00000400540 LIFP15018 202 aa11.91□□□□□ -0.5
LINC00544-201ENST00000400540 TNFAIP3P21580 790 aa11.91□□□□□ -0.5
LINC00544-201ENST00000400540 CD82P27701 267 aa11.91□□□□□ -0.5
LINC00544-201ENST00000400540 VIPR1P32241 457 aa11.91□□□□□ -0.5
LINC00544-201ENST00000400540 AP1S1P61966 158 aa11.91□□□□□ -0.5
LINC00544-201ENST00000400540 POLR2LP62875 67 aaKnown RBP11.91□□□□□ -0.5
LINC00544-201ENST00000400540 CDK3Q00526 305 aa11.91□□□□□ -0.5
LINC00544-201ENST00000400540 TLE1Q04724 770 aa11.91□□□□□ -0.5
LINC00544-201ENST00000400540 NSUN2Q08J23 767 aaKnown RBP eCLIP11.91□□□□□ -0.5
LINC00544-201ENST00000400540 ILF3Q12906 894 aaKnown RBP eCLIP11.91□□□□□ -0.5
LINC00544-201ENST00000400540 LBRQ14739 615 aaKnown RBP11.91□□□□□ -0.5
LINC00544-201ENST00000400540 TSR1Q2NL82 804 aaKnown RBP11.91□□□□□ -0.5
LINC00544-201ENST00000400540 COLEC12Q5KU26 742 aa11.91□□□□□ -0.5
LINC00544-201ENST00000400540 ERMARDQ5T6L9 678 aa11.91□□□□□ -0.5
LINC00544-201ENST00000400540 DOK6Q6PKX4 331 aa11.91□□□□□ -0.5
LINC00544-201ENST00000400540 RFLNAQ6ZTI6 216 aa11.91□□□□□ -0.5
LINC00544-201ENST00000400540 TSPAN33Q86UF1 283 aa11.91□□□□□ -0.5
LINC00544-201ENST00000400540 PTRH1Q86Y79 214 aaKnown RBP11.91□□□□□ -0.5
LINC00544-201ENST00000400540 NAGSQ8N159 534 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms