RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 NEUROG3Q9Y4Z2 214 aa16.72■□□□□ 0.27
APTR-201ENST00000398043 OR1A2Q9Y585 309 aa16.72■□□□□ 0.27
APTR-201ENST00000398043 CSNK1G3Q9Y6M4 447 aa16.72■□□□□ 0.27
APTR-201ENST00000398043 U3KQA8 63 aa16.72■□□□□ 0.27
APTR-201ENST00000398043 MACROD2A1Z1Q3 448 aa16.71■□□□□ 0.27
APTR-201ENST00000398043 CAPN8A6NHC0 703 aa16.71■□□□□ 0.27
APTR-201ENST00000398043 APOC4-APOC2K7ER74 178 aa16.71■□□□□ 0.27
APTR-201ENST00000398043 DDX3YO15523 660 aaKnown RBP16.71■□□□□ 0.27
APTR-201ENST00000398043 GCATO75600 419 aa16.71■□□□□ 0.27
APTR-201ENST00000398043 APOC2P02655 101 aa16.71■□□□□ 0.27
APTR-201ENST00000398043 PCCBP05166 539 aa16.71■□□□□ 0.27
APTR-201ENST00000398043 PYGMP11217 842 aa16.71■□□□□ 0.27
APTR-201ENST00000398043 NAP1L1P55209 391 aaKnown RBP16.71■□□□□ 0.27
APTR-201ENST00000398043 KIAA1024LP59773 190 aa16.71■□□□□ 0.27
APTR-201ENST00000398043 DNAJC3Q13217 504 aa16.71■□□□□ 0.27
APTR-201ENST00000398043 ACOX1Q15067 660 aa16.71■□□□□ 0.27
APTR-201ENST00000398043 NOMO1Q15155 1222 aa16.71■□□□□ 0.27
APTR-201ENST00000398043 AADACL2Q6P093 401 aa16.71■□□□□ 0.27
APTR-201ENST00000398043 PNCKQ6P2M8 343 aa16.71■□□□□ 0.27
APTR-201ENST00000398043 RFLNAQ6ZTI6 216 aa16.71■□□□□ 0.27
APTR-201ENST00000398043 Q6ZVL8 140 aa16.71■□□□□ 0.27
APTR-201ENST00000398043 CCDC50Q8IVM0 306 aa16.71■□□□□ 0.27
APTR-201ENST00000398043 PHACTR4Q8IZ21 702 aa16.71■□□□□ 0.27
APTR-201ENST00000398043 NUS1Q96E22 293 aa16.71■□□□□ 0.27
APTR-201ENST00000398043 AGAP3Q96P47 875 aa16.71■□□□□ 0.27
APTR-201ENST00000398043 QKIQ96PU8 341 aaKnown RBP eCLIP16.71■□□□□ 0.27
APTR-201ENST00000398043 RBM15Q96T37 977 aaKnown RBP eCLIP16.71■□□□□ 0.27
APTR-201ENST00000398043 CLPBQ9H078 707 aa16.71■□□□□ 0.27
APTR-201ENST00000398043 SLC25A51Q9H1U9 297 aa16.71■□□□□ 0.27
APTR-201ENST00000398043 GLOD4Q9HC38 313 aa16.71■□□□□ 0.27
APTR-201ENST00000398043 NLGN3Q9NZ94 848 aa16.71■□□□□ 0.27
APTR-201ENST00000398043 PCDHGA1Q9Y5H4 931 aa16.71■□□□□ 0.27
APTR-201ENST00000398043 CAPN6Q9Y6Q1 641 aa16.71■□□□□ 0.27
APTR-201ENST00000398043 UNC13CQ8NB66 2214 aa16.71■□□□□ 0.27
APTR-201ENST00000398043 ZNF106Q9H2Y7 1883 aaKnown RBP16.7■□□□□ 0.26
APTR-201ENST00000398043 NEBLO76041 1014 aa16.7■□□□□ 0.26
APTR-201ENST00000398043 SOD1P00441 154 aa16.7■□□□□ 0.26
APTR-201ENST00000398043 C1SP09871 688 aa16.7■□□□□ 0.26
APTR-201ENST00000398043 ZNF30P17039 623 aa16.7■□□□□ 0.26
APTR-201ENST00000398043 ACP1P24666 158 aa16.7■□□□□ 0.26
APTR-201ENST00000398043 NFKBIAP25963 317 aa16.7■□□□□ 0.26
APTR-201ENST00000398043 TEAD1P28347 426 aa16.7■□□□□ 0.26
APTR-201ENST00000398043 ETV3P41162 512 aa16.7■□□□□ 0.26
APTR-201ENST00000398043 RWDD2BP57060 319 aa16.7■□□□□ 0.26
APTR-201ENST00000398043 DPTQ07507 201 aa16.7■□□□□ 0.26
APTR-201ENST00000398043 XRCC4Q13426 336 aa16.7■□□□□ 0.26
APTR-201ENST00000398043 QPCTQ16769 361 aa16.7■□□□□ 0.26
APTR-201ENST00000398043 ALG11Q2TAA5 492 aa16.7■□□□□ 0.26
APTR-201ENST00000398043 LRRC66Q68CR7 880 aa16.7■□□□□ 0.26
APTR-201ENST00000398043 ZC3H18Q86VM9 953 aaKnown RBP16.7■□□□□ 0.26
APTR-201ENST00000398043 FAM181AQ8N9Y4 354 aa16.7■□□□□ 0.26
APTR-201ENST00000398043 BTN2A2Q8WVV5 523 aa16.7■□□□□ 0.26
APTR-201ENST00000398043 GATA6Q92908 595 aa16.7■□□□□ 0.26
APTR-201ENST00000398043 HAUS1Q96CS2 278 aa16.7■□□□□ 0.26
APTR-201ENST00000398043 CNTNAP3BQ96NU0 1288 aa16.7■□□□□ 0.26
APTR-201ENST00000398043 LRRC61Q9BV99 259 aa16.7■□□□□ 0.26
APTR-201ENST00000398043 LGR4Q9BXB1 951 aa16.7■□□□□ 0.26
APTR-201ENST00000398043 CNTNAP3Q9BZ76 1288 aa16.7■□□□□ 0.26
APTR-201ENST00000398043 OSBPL8Q9BZF1 889 aa16.7■□□□□ 0.26
APTR-201ENST00000398043 KCTD5Q9NXV2 234 aa16.7■□□□□ 0.26
APTR-201ENST00000398043 SEPT10Q9P0V9 454 aa16.7■□□□□ 0.26
APTR-201ENST00000398043 IGF2RP11717 2491 aa16.7■□□□□ 0.26
APTR-201ENST00000398043 KIF26BQ2KJY2 2108 aa16.69■□□□□ 0.26
APTR-201ENST00000398043 TMEM202A6NGA9 273 aa16.69■□□□□ 0.26
APTR-201ENST00000398043 GOLGA8CPA6NN73 597 aa16.69■□□□□ 0.26
APTR-201ENST00000398043 GOLGA6L6A8MZA4 724 aa16.69■□□□□ 0.26
APTR-201ENST00000398043 HACD1B0YJ81 288 aa16.69■□□□□ 0.26
APTR-201ENST00000398043 ANKRD66B4E2M5 251 aa16.69■□□□□ 0.26
APTR-201ENST00000398043 H3BM21 787 aa16.69■□□□□ 0.26
APTR-201ENST00000398043 FFAR2O15552 330 aa16.69■□□□□ 0.26
APTR-201ENST00000398043 MTSS1O43312 755 aa16.69■□□□□ 0.26
APTR-201ENST00000398043 AQP9O43315 295 aa16.69■□□□□ 0.26
APTR-201ENST00000398043 CKMT2P17540 419 aa16.69■□□□□ 0.26
APTR-201ENST00000398043 CA4P22748 312 aa16.69■□□□□ 0.26
APTR-201ENST00000398043 HK3P52790 923 aa16.69■□□□□ 0.26
APTR-201ENST00000398043 STC1P52823 247 aa16.69■□□□□ 0.26
APTR-201ENST00000398043 PPARDQ03181 441 aa16.69■□□□□ 0.26
APTR-201ENST00000398043 TMPRSS7Q7RTY8 843 aa16.69■□□□□ 0.26
APTR-201ENST00000398043 NLRP8Q86W28 1048 aa16.69■□□□□ 0.26
APTR-201ENST00000398043 LRRC8AQ8IWT6 810 aa16.69■□□□□ 0.26
APTR-201ENST00000398043 RAVER1Q8IY67 606 aaKnown RBP16.69■□□□□ 0.26
APTR-201ENST00000398043 NDUFAF2Q8N183 169 aa16.69■□□□□ 0.26
APTR-201ENST00000398043 TXLNBQ8N3L3 684 aa16.69■□□□□ 0.26
APTR-201ENST00000398043 RNF10Q8N5U6 811 aaKnown RBP16.69■□□□□ 0.26
APTR-201ENST00000398043 LPCAT1Q8NF37 534 aa16.69■□□□□ 0.26
APTR-201ENST00000398043 SPATA22Q8NHS9 363 aa16.69■□□□□ 0.26
APTR-201ENST00000398043 TSACCQ96A04 125 aaPredicted RBP16.69■□□□□ 0.26
APTR-201ENST00000398043 EID2BQ96D98 161 aa16.69■□□□□ 0.26
APTR-201ENST00000398043 HES6Q96HZ4 224 aa16.69■□□□□ 0.26
APTR-201ENST00000398043 WDR92Q96MX6 357 aa16.69■□□□□ 0.26
APTR-201ENST00000398043 WDR24Q96S15 920 aa16.69■□□□□ 0.26
APTR-201ENST00000398043 TEX101Q9BY14 249 aa16.69■□□□□ 0.26
APTR-201ENST00000398043 APOBEC3BQ9UH17 382 aaKnown RBP16.69■□□□□ 0.26
APTR-201ENST00000398043 AMFRQ9UKV5 643 aa16.69■□□□□ 0.26
APTR-201ENST00000398043 PACSIN2Q9UNF0 486 aaPredicted RBP16.69■□□□□ 0.26
APTR-201ENST00000398043 MSRB2Q9Y3D2 182 aa16.69■□□□□ 0.26
APTR-201ENST00000398043 DGKBQ9Y6T7 804 aa16.69■□□□□ 0.26
APTR-201ENST00000398043 EPG5Q9HCE0 2579 aa16.68■□□□□ 0.26
APTR-201ENST00000398043 NEMP2A6NFY4 417 aa16.68■□□□□ 0.26
APTR-201ENST00000398043 TPP1O14773 563 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms