RNA–Protein interactions for RNA: ENST00000397381.4

UCA1-201, Transcript of urothelial cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene UCA1, Length 2,299 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-201ENST00000397381 EGFL7Q9UHF1 273 aa9.34□□□□□ -0.91
UCA1-201ENST00000397381 SBF1O95248 1867 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 WDR90Q96KV7 1748 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 TCRBV5S2A0A599 114 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 TYW5A2RUC4 315 aaKnown RBP9.33□□□□□ -0.92
UCA1-201ENST00000397381 J3QRK9 145 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 CNOT3O75175 753 aaKnown RBP9.33□□□□□ -0.92
UCA1-201ENST00000397381 CD4P01730 458 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 ALBP02768 609 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 VTNP04004 478 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 NPR3P17342 541 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 MATN1P21941 496 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 TKTP29401 623 aaKnown RBP9.33□□□□□ -0.92
UCA1-201ENST00000397381 OXTRP30559 389 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 ETFBP38117 255 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 SLC26A3P40879 764 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 PNPLA4P41247 253 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 ITGADQ13349 1161 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 LAMC2Q13753 1193 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 CBX2Q14781 532 aaPredicted RBP9.33□□□□□ -0.92
UCA1-201ENST00000397381 CYP51A1Q16850 503 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 RBM48Q5RL73 367 aaKnown RBP9.33□□□□□ -0.92
UCA1-201ENST00000397381 NOL9Q5SY16 702 aaKnown RBP9.33□□□□□ -0.92
UCA1-201ENST00000397381 DENND5AQ6IQ26 1287 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 NEPROQ6NW34 567 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 OTOP3Q7RTS5 596 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 LIMS2Q7Z4I7 341 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 IGFN1Q86VF2 1251 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 TTC30BQ8N4P2 665 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 SCAIQ8N9R8 606 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 RNF169Q8NCN4 708 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 CALML6Q8TD86 181 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 C18orf25Q96B23 403 aaPredicted RBP9.33□□□□□ -0.92
UCA1-201ENST00000397381 FBXL8Q96CD0 374 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 LRRC58Q96CX6 371 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 PGAP3Q96FM1 320 aaPredicted RBP9.33□□□□□ -0.92
UCA1-201ENST00000397381 GLT1D1Q96MS3 346 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 ZNF347Q96SE7 839 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 MTG1Q9BT17 334 aaPredicted RBP9.33□□□□□ -0.92
UCA1-201ENST00000397381 FICDQ9BVA6 458 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 SPATC1LQ9H0A9 340 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 RAD21L1Q9H4I0 556 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 AKTIPQ9H8T0 292 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 FANCEQ9HB96 536 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 FBRSL1Q9HCM7 1045 aaKnown RBP9.33□□□□□ -0.92
UCA1-201ENST00000397381 ENTPD7Q9NQZ7 604 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 TREX1Q9NSU2 369 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 UBQLN1Q9UMX0 589 aaKnown RBP9.33□□□□□ -0.92
UCA1-201ENST00000397381 TRIM17Q9Y577 477 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 PCDHA9Q9Y5H5 950 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 TLL2Q9Y6L7 1015 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 SHROOM3Q8TF72 1996 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 PIRO00625 290 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 UBFD1O14562 309 aaKnown RBP9.33□□□□□ -0.92
UCA1-201ENST00000397381 INPP4BO15327 924 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 CLIC3O95833 236 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 F9P00740 461 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 FGF4P08620 206 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 CAPN3P20807 821 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 FUT4P22083 530 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 NFKB2Q00653 900 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 UGT3A2Q3SY77 523 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 VPS26BQ4G0F5 336 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 ZNF678Q5SXM1 525 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 CLEC6AQ6EIG7 209 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 LINC00299Q6ZSB3 139 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 ARMCX2Q7L311 632 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 RNF135Q8IUD6 432 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 B3GALNT2Q8NCR0 500 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 APPL2Q8NEU8 664 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 MAGEE2Q8TD90 523 aaPredicted RBP9.33□□□□□ -0.92
UCA1-201ENST00000397381 SNX19Q92543 992 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 TMEM125Q96AQ2 219 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 LRCH3Q96II8 777 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 UBXN10Q96LJ8 280 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 SLX1AQ9BQ83 275 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 GLOD4Q9HC38 313 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 SNTG2Q9NY99 539 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 VWA7Q9Y334 891 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 FAM32AQ9Y421 112 aaKnown RBP9.33□□□□□ -0.92
UCA1-201ENST00000397381 CORINQ9Y5Q5 1042 aa9.33□□□□□ -0.92
UCA1-201ENST00000397381 C1orf232A0A0U1RR37 186 aa9.32□□□□□ -0.92
UCA1-201ENST00000397381 ATP6AP2A0A1C7CYW4 349 aa9.32□□□□□ -0.92
UCA1-201ENST00000397381 C16orf96A6NNT2 1141 aa9.32□□□□□ -0.92
UCA1-201ENST00000397381 TNPO2O14787 897 aaKnown RBP9.32□□□□□ -0.92
UCA1-201ENST00000397381 VPS4BO75351 444 aa9.32□□□□□ -0.92
UCA1-201ENST00000397381 ATP6AP2O75787 350 aa9.32□□□□□ -0.92
UCA1-201ENST00000397381 SNAP29O95721 258 aa9.32□□□□□ -0.92
UCA1-201ENST00000397381 TXNP10599 105 aaKnown RBP9.32□□□□□ -0.92
UCA1-201ENST00000397381 WARSP23381 471 aaKnown RBP9.32□□□□□ -0.92
UCA1-201ENST00000397381 EEF1B2P24534 225 aaKnown RBP9.32□□□□□ -0.92
UCA1-201ENST00000397381 CCNCP24863 283 aa9.32□□□□□ -0.92
UCA1-201ENST00000397381 GSTM2P28161 218 aa9.32□□□□□ -0.92
UCA1-201ENST00000397381 RXRGP48443 463 aa9.32□□□□□ -0.92
UCA1-201ENST00000397381 GSK3BP49841 420 aa9.32□□□□□ -0.92
UCA1-201ENST00000397381 EEFSECP57772 596 aaKnown RBP9.32□□□□□ -0.92
UCA1-201ENST00000397381 GNA12Q03113 381 aa9.32□□□□□ -0.92
UCA1-201ENST00000397381 OCA2Q04671 838 aa9.32□□□□□ -0.92
UCA1-201ENST00000397381 ILF2Q12905 390 aaKnown RBP9.32□□□□□ -0.92
UCA1-201ENST00000397381 UNC50Q53HI1 259 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms