RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 SPPL2BQ8TCT7 592 aa23.8■■□□□ 1.4
PABPN1-202ENST00000397276 TMA16Q96EY4 203 aaKnown RBP23.8■■□□□ 1.4
PABPN1-202ENST00000397276 UBXN10Q96LJ8 280 aa23.8■■□□□ 1.4
PABPN1-202ENST00000397276 SMIM14Q96QK8 99 aa23.8■■□□□ 1.4
PABPN1-202ENST00000397276 ZBTB26Q9HCK0 441 aa23.8■■□□□ 1.4
PABPN1-202ENST00000397276 UBAP1Q9NZ09 502 aa23.8■■□□□ 1.4
PABPN1-202ENST00000397276 SUPT7LO94864 414 aa23.8■■□□□ 1.4
PABPN1-202ENST00000397276 PAPSS2O95340 614 aaPredicted RBP23.8■■□□□ 1.4
PABPN1-202ENST00000397276 IGLV3-27P01718 113 aa23.8■■□□□ 1.4
PABPN1-202ENST00000397276 RPS24P62847 133 aaKnown RBP23.8■■□□□ 1.4
PABPN1-202ENST00000397276 SEMA3AQ14563 771 aa23.8■■□□□ 1.4
PABPN1-202ENST00000397276 CLEC6AQ6EIG7 209 aa23.8■■□□□ 1.4
PABPN1-202ENST00000397276 CUZD1Q86UP6 607 aa23.8■■□□□ 1.4
PABPN1-202ENST00000397276 TSPAN17Q96FV3 270 aa23.8■■□□□ 1.4
PABPN1-202ENST00000397276 HSFX1Q9UBD0 423 aa23.8■■□□□ 1.4
PABPN1-202ENST00000397276 PHF24Q9UPV7 400 aa23.8■■□□□ 1.4
PABPN1-202ENST00000397276 ZFP37Q9Y6Q3 630 aaPredicted RBP23.8■■□□□ 1.4
PABPN1-202ENST00000397276 LAMA3Q16787 3333 aa23.8■■□□□ 1.4
PABPN1-202ENST00000397276 THSD7BQ9C0I4 1608 aa23.8■■□□□ 1.4
PABPN1-202ENST00000397276 PRAMEF11O60813 436 aa23.8■■□□□ 1.4
PABPN1-202ENST00000397276 GJB5O95377 273 aa23.8■■□□□ 1.4
PABPN1-202ENST00000397276 GLP2RO95838 553 aa23.8■■□□□ 1.4
PABPN1-202ENST00000397276 TCN1P20061 433 aaPredicted RBP23.8■■□□□ 1.4
PABPN1-202ENST00000397276 TCTN1Q2MV58 587 aa23.8■■□□□ 1.4
PABPN1-202ENST00000397276 RBM44Q6ZP01 1051 aaKnown RBP23.8■■□□□ 1.4
PABPN1-202ENST00000397276 ATP6AP2A0A1C7CYW4 349 aa23.79■■□□□ 1.4
PABPN1-202ENST00000397276 CCDC162PA2VCL2 907 aa23.79■■□□□ 1.4
PABPN1-202ENST00000397276 VILLO15195 856 aa23.79■■□□□ 1.4
PABPN1-202ENST00000397276 ATP6AP2O75787 350 aa23.79■■□□□ 1.4
PABPN1-202ENST00000397276 SELPP16109 830 aa23.79■■□□□ 1.4
PABPN1-202ENST00000397276 HK2P52789 917 aa23.79■■□□□ 1.4
PABPN1-202ENST00000397276 THOP1P52888 689 aa23.79■■□□□ 1.4
PABPN1-202ENST00000397276 CDH13P55290 713 aa23.79■■□□□ 1.4
PABPN1-202ENST00000397276 DNAJB13P59910 316 aa23.79■■□□□ 1.4
PABPN1-202ENST00000397276 ART3Q13508 389 aa23.79■■□□□ 1.4
PABPN1-202ENST00000397276 ACAP2Q15057 778 aa23.79■■□□□ 1.4
PABPN1-202ENST00000397276 GK5Q6ZS86 529 aa23.79■■□□□ 1.4
PABPN1-202ENST00000397276 CPSF7Q8N684 471 aaKnown RBP23.79■■□□□ 1.4
PABPN1-202ENST00000397276 CEP70Q8NHQ1 597 aa23.79■■□□□ 1.4
PABPN1-202ENST00000397276 BCL7CQ8WUZ0 217 aaPredicted RBP23.79■■□□□ 1.4
PABPN1-202ENST00000397276 ZNF512Q96ME7 567 aaPredicted RBP23.79■■□□□ 1.4
PABPN1-202ENST00000397276 ZNF385DQ9H6B1 395 aa23.79■■□□□ 1.4
PABPN1-202ENST00000397276 DDX18Q9NVP1 670 aaKnown RBP23.79■■□□□ 1.4
PABPN1-202ENST00000397276 SLC38A8A6NNN8 435 aa23.79■■□□□ 1.4
PABPN1-202ENST00000397276 TBKBP1A7MCY6 615 aa23.79■■□□□ 1.4
PABPN1-202ENST00000397276 CD3EAPO15446 510 aaKnown RBP23.79■■□□□ 1.4
PABPN1-202ENST00000397276 RBP1P09455 135 aa23.79■■□□□ 1.4
PABPN1-202ENST00000397276 SCNN1BP51168 640 aa23.79■■□□□ 1.4
PABPN1-202ENST00000397276 LHX8Q68G74 356 aa23.79■■□□□ 1.4
PABPN1-202ENST00000397276 ZNF549Q6P9A3 640 aa23.79■■□□□ 1.4
PABPN1-202ENST00000397276 DENND1CQ8IV53 801 aa23.79■■□□□ 1.4
PABPN1-202ENST00000397276 FNDC3AQ9Y2H6 1198 aaKnown RBP23.79■■□□□ 1.4
PABPN1-202ENST00000397276 FRMPD3Q5JV73 1810 aa23.79■■□□□ 1.4
PABPN1-202ENST00000397276 SCAMP3O14828 347 aaKnown RBP23.78■■□□□ 1.4
PABPN1-202ENST00000397276 ATP6V1B1P15313 513 aa23.78■■□□□ 1.4
PABPN1-202ENST00000397276 DPP6P42658 865 aa23.78■■□□□ 1.4
PABPN1-202ENST00000397276 C16orf89Q6UX73 402 aa23.78■■□□□ 1.4
PABPN1-202ENST00000397276 ISCA2Q86U28 154 aa23.78■■□□□ 1.4
PABPN1-202ENST00000397276 METTL25Q8N6Q8 603 aa23.78■■□□□ 1.4
PABPN1-202ENST00000397276 TADA1Q96BN2 335 aa23.78■■□□□ 1.4
PABPN1-202ENST00000397276 PTERQ96BW5 349 aa23.78■■□□□ 1.4
PABPN1-202ENST00000397276 GALNT8Q9NY28 637 aa23.78■■□□□ 1.4
PABPN1-202ENST00000397276 FNDC1Q4ZHG4 1894 aaPredicted RBP23.78■■□□□ 1.4
PABPN1-202ENST00000397276 CCDC160A6NGH7 325 aa23.78■■□□□ 1.4
PABPN1-202ENST00000397276 TRPC5OSA6NMA1 111 aa23.78■■□□□ 1.4
PABPN1-202ENST00000397276 ASLP04424 464 aa23.78■■□□□ 1.4
PABPN1-202ENST00000397276 TFAP2AP05549 437 aa23.78■■□□□ 1.4
PABPN1-202ENST00000397276 RGRP47804 291 aa23.78■■□□□ 1.4
PABPN1-202ENST00000397276 FAM156AQ8NDB6 213 aa23.78■■□□□ 1.4
PABPN1-202ENST00000397276 ICA1LQ8NDH6 482 aa23.78■■□□□ 1.4
PABPN1-202ENST00000397276 FATE1Q969F0 183 aa23.78■■□□□ 1.4
PABPN1-202ENST00000397276 NSMCE3Q96MG7 304 aa23.78■■□□□ 1.4
PABPN1-202ENST00000397276 GKN1Q9NS71 199 aa23.78■■□□□ 1.4
PABPN1-202ENST00000397276 UBFD1O14562 309 aaKnown RBP23.77■■□□□ 1.4
PABPN1-202ENST00000397276 GALTP07902 379 aa23.77■■□□□ 1.4
PABPN1-202ENST00000397276 SERPINF2P08697 491 aa23.77■■□□□ 1.4
PABPN1-202ENST00000397276 XRCC1P18887 633 aaPredicted RBP23.77■■□□□ 1.4
PABPN1-202ENST00000397276 HDCP19113 662 aa23.77■■□□□ 1.4
PABPN1-202ENST00000397276 YBEYP58557 167 aaPredicted RBP23.77■■□□□ 1.4
PABPN1-202ENST00000397276 BNC2Q6ZN30 1099 aaPredicted RBP23.77■■□□□ 1.4
PABPN1-202ENST00000397276 RMDN1Q96DB5 314 aa23.77■■□□□ 1.4
PABPN1-202ENST00000397276 DTNBP1Q96EV8 351 aa23.77■■□□□ 1.4
PABPN1-202ENST00000397276 CYP2S1Q96SQ9 504 aa23.77■■□□□ 1.4
PABPN1-202ENST00000397276 UBA6A0AVT1 1052 aaPredicted RBP23.77■■□□□ 1.4
PABPN1-202ENST00000397276 ARVCFO00192 962 aa23.77■■□□□ 1.4
PABPN1-202ENST00000397276 PIM1P11309 404 aaPredicted RBP23.77■■□□□ 1.4
PABPN1-202ENST00000397276 PMLP29590 882 aa23.77■■□□□ 1.4
PABPN1-202ENST00000397276 FBXO48Q5FWF7 155 aa23.77■■□□□ 1.4
PABPN1-202ENST00000397276 JADE3Q92613 823 aa23.77■■□□□ 1.4
PABPN1-202ENST00000397276 TTPALQ9BTX7 342 aa23.77■■□□□ 1.4
PABPN1-202ENST00000397276 WDR41Q9HAD4 459 aa23.77■■□□□ 1.4
PABPN1-202ENST00000397276 TSPAN3O60637 253 aa23.76■■□□□ 1.39
PABPN1-202ENST00000397276 INHAP05111 366 aa23.76■■□□□ 1.39
PABPN1-202ENST00000397276 ATP5C1P36542 298 aaKnown RBP23.76■■□□□ 1.39
PABPN1-202ENST00000397276 ALDH1A3P47895 512 aa23.76■■□□□ 1.39
PABPN1-202ENST00000397276 KBTBD6Q86V97 674 aa23.76■■□□□ 1.39
PABPN1-202ENST00000397276 SPATA17Q96L03 361 aa23.76■■□□□ 1.39
PABPN1-202ENST00000397276 EML4Q9HC35 981 aaKnown RBP23.76■■□□□ 1.39
PABPN1-202ENST00000397276 CCDC167Q9P0B6 97 aa23.76■■□□□ 1.39
PABPN1-202ENST00000397276 APPL1Q9UKG1 709 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms